[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-001315
Length:
1,188
Sequence:
[FASTA format sequence]
NTTGAACAXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXTTT
CCCTTGACTT CATCCCCTCT GCTGTGAAAT GAGGTCAGGC CACTCTTAAT CCTATGATTC
TGTGCTCCCT GGTGTTTCTG TTGAGCTGCT GGCTTTGACA TCTGTGAATC TGGAGGACCA
GTTGCTACAT CAATGAGCCA GAGAAAATGG GGAAAGCGGT ATTTACTATC AGAATGCAGA
CAGCAGAAGA ATAGGGCACG GGGGTCACCA CGTACGCAGT GCACCCAGGC ATCGTCCAGT
CTGAGCTGGT CCGGCATTCC TTCCTGCTGT GCCTGCTCTG GCGGCTCTTC TCCCGCTTCC
TCAAAACAGC GCGGGAGGGG GCCCAGACCA GCCTGCACTG CGCCCTGGCC GAGGGCTTGG
AGCCCCTGAG CGGCAAGTAC TTCAGTGACT GCAAGAGGGC CTGGGTGTCG CCAAGGGCCC
GGAATAACAA AACGGCCGAG CGCTTGTGGA ACGTCAGCTG CGAGCTCCTG GGAATCCAGT
GGGAGTAGAG CTGCTGGAAG ATGCGCGGCT GTATCAAGCC TGGTCCAGGC CATAACGCAG
ACCGGGGAGA TGGCCCACCC CGAAGGACTG ACCTGGCTGG CTGCTGTNCC CAACACTTCC
CTGCTTTGAT TCTCCTGATC CTTGNAAACC TNCCCACACC TAACCCTCTT ACCCAGCTGA
TTCTCGGCAT AAGAAGTTCA TACCTGGAGA GCATCGTCCT TGAAGACTTG CAAAGTCNNN
GCACTTCTCG GGGCAAGAAG ACGGGGCCAA ATGCCAGCTG GGCACGGGAT GGCAAAAGAA
CTGGGAAATT GATTCAATTT CTTCACAATA ACAAAAACCC CACCGGCACC TCGGGAAGGG
TCATGTTACA TTTTTCCGGG AATAGAACTC AACCCTGACC AAATCCTTCC TCTTGAAAAA
TATCCGGCAT CTGGAAATGG GAATTTAAAA TGGCCACCCG AAATTTATTT TTGGGGGGCA
AATTGGAAAA ACCCAAAAAA CCTTCCGGAA CCTGAAAACC TCCCGGGGAA GGGGGAATAG
AAATTGAATT TTCCCCGGGG GAATTTAAAA AAATTTTTAT ATACCTTTTG AAATTTTCAC
CCTTTCGGGG AAAAAAATTG GTTCCCAATC CTTTGGCTCC TTAGACCCCA GTCCGGGGGG
GTTTCCTCCT TCCCGGTAAA ATTTCTCCAT TCGGGAAAAA AAACTTTTCT CTCACGTGTT
AGGGGGTTCT TCCCTCTTCC TAAAAAAAAA AATTCCCGGT GTATTATCGT GCTACATTGT
GACAATAAAA TACCCCTATA ATTAT
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 194 | 2e-49 | |||
RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 135 | 7e-32 | |||
MGC23280 | hypothetical protein MGC23280 | 92.8 | 5e-19 | |||
RDH14 | retinol dehydrogenase 14 (all-trans/9-cis/11-cis) | 80.1 | 3e-15 | |||
RDH13 | retinol dehydrogenase 13 (all-trans/9-cis) | 69.3 | 6e-12 | |||
WWOX | WW domain containing oxidoreductase | 69.3 | 6e-12 | |||
DHRSX | dehydrogenase/reductase (SDR family) X-linked | 59.7 | 5e-09 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Rdh12 | retinol dehydrogenase 12 | 173 | 3e-43 | |||
Rdh11 | retinol dehydrogenase 11 | 128 | 1e-29 | |||
Rdh14 | retinol dehydrogenase 14 (all-trans and 9-cis) | 81.3 | 2e-15 | |||
Wwox | WW domain-containing oxidoreductase | 71.2 | 2e-12 | |||
Rdh13 | retinol dehydrogenase 13 (all-trans and 9-cis) | 69.3 | 7e-12 | |||
Dhrsx | dehydrogenase/reductase (SDR family) X chromosome | 51.6 | 2e-06 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC490744 | similar to retinol dehydrogenase 12 (all-trans and 9-cis) | 194 | 2e-49 | |||
LOC480366 | similar to Retinol dehydrogenase 11 (Retinal reductase 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) | 129 | 6e-30 | |||
LOC491173 | similar to retinol dehydrogenase 11 (predicted) | 93.2 | 4e-19 | |||
LOC482983 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 81.6 | 1e-15 | |||
LOC482983 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 81.6 | 1e-15 | |||
LOC611373 | similar to Retinol dehydrogenase 13 | 72.4 | 8e-13 | |||
LOC475790 | similar to Retinol dehydrogenase 12 | 65.1 | 1e-10 | |||
LOC609792 | similar to dehydrogenase/reductase (SDR family) X-linked | 52.8 | 7e-07 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
DSSDR2 | double substrate-specificity short chain dehydrogenase/reductase 2 | 191 | 1e-48 | |||
LOC505995 | similar to Retinol dehydrogenase 11 (Retinal reductase 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) | 132 | 7e-31 | |||
LOC505995 | similar to Retinol dehydrogenase 11 (Retinal reductase 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) | 132 | 7e-31 | |||
MGC139505 | similar to retinol dehydrogenase 11 (predicted) | 94 | 2e-19 | |||
MGC139076 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 80.5 | 2e-15 | |||
MGC140618 | similar to retinol dehydrogenase 13 (all-trans and 9-cis) | 70.9 | 2e-12 | |||
LOC507942 | similar to retinol dehydrogenase 11 (predicted) | 60.1 | 3e-09 | |||
LOC513482 | similar to dehydrogenase/reductase (SDR family) X-linked | 51.6 | 1e-06 |
Locus | Definition | Score | E value | FL |
---|
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