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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-002158

Length: 1,174

Sequence [FASTA format sequence]
NNNNNGGATG AACAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXCAA
GGGGACGCCA GAGCAGCCCC AGTGTGGCTT CAGCAACGCC GTGGTGCAGA TCCTGCGGCT
GCACGGCGTC CGCGACTACG CGGCCTACAA CGTGCTGGAC GACCCCCAGC TCCGGCAAGG
CATTAAAGAC TATTCCAACT GGCCCACCAT CCCGCAAGTG TACCTCAACG GCGAGTTCGT
GGGGGGCTGT GACATTCTTC TGCAGATGCA CCAGAACGGG GACCTGGTGG AAGAGCTGAA
AAAGCTGGGG ATCCGCTCCG CCCTTTTAGA TGAAAAGACA GACCAAGACT CGAAGTGAGG
GTGGCCCCGG GCGAGGGAGC CCCTGGGGTC AGAGACTCAC TGCCAGAAAA GCCTTACTGA
TTTGGGTGTC CCTCTTCAGA CAGCTGCTTT GCACTGATTC TTCCAGTTTG TAAGCAGCCC
AGTGATTTTA GGGTGTCTGG GGTTTGGGGC AAAGAAAAAC TTCTTGTGAA CGTAATTGTA
ACCACTGCAC TGTAATTAAT CACCACTGCG GTGTTAGGAG ATTGCTGTAG ACACAATTCC
TTCTTGTGTT GTCCTGTGTC CTGTGCCTGA TTCCGAATCA TTGTTACCAT TCACGAGTCT
TCTGCAGATG TGTCAGTCCA CAGAGATAAT AGAGCCCTCT CCTCTGATTT TTTGTAACTT
GTTCTGTAAG AAAATGATGG ACAAGGAAGA ACATATGATA ACCCGGCTGT TGTTTTTTAA
ATAAACCAAT CCAGGGAAAA AAAAAAAAAA AAAAAAAAAX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGG ATATTAAAAT
CCAAGCCCAA GTTTATTTTG GCCCTCCATC CTCAAGTGGG TTGGAATATA AACACCCACC
CAATTTGGAG GGTTTCTTGC TTAAAACACC CCAACTCCCC CGAACGGAAA AAAAAGAAGC
ATTGTGGGTT TACATGTTTT TCCCTT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGLRX5glutaredoxin 5 homolog (S. cerevisiae)2018e-52
Contig/Assembly ProteinTXNL2thioredoxin-like 288.21e-17


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGlrx5glutaredoxin 5 homolog (S. cerevisiae)1981e-50
Contig/Assembly ProteinTxnl2thioredoxin-like 289.47e-18


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC477869similar to Thioredoxin-like 2 protein (PKC-interacting cousin of thioredoxin) (PKCq-interacting protein) (PKC-theta-interacting protein)89.46e-18


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC505935similar to CG14407-PA2019e-52
Contig/Assembly ProteinTXNL2thioredoxin-like897e-18
Contig/Assembly ProteinLOC616291similar to Thioredoxin-like protein 2 (PKC-interacting cousin of thioredoxin) (PKC-theta-interacting protein) (PKCq-interacting protein) (HUSSY-22)61.21e-09
Contig/Assembly ProteinLOC506622hypothetical LOC50662253.14e-07


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010070D10ADR01_0070_D10.bDB787721