[Help]

[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-002811

Length: 1,193

Sequence [FASTA format sequence]
NNNAATGACT AACAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXCGAGC
TGTCCAGGGC TCCGGCGAGC GTACGGGGAT GAGCGCGTCC CTGGGCCGGG CGGCGGCGGC
TCTGCTCCGC TGGGGGCGCG GCGTAGGCGG TGGTCTGTGG GTCCCGGGCG TGCGGGCGGC
GAGCTCGGGC GGGAGCGGCT CAGCGGAGCA TCTGGACACG CTGGTGAAGA AGGACAAGGT
GGTGGTCTTC CTCAAGGGGA CGCCAGAGCA GCCCCAGTGT GGCTTCAGCA ACGCCGTGGT
GCAGATCCTG CGGCTGCACG GCGTCCGCGA CTACGCGGCC TACAACGTGC TGGACGACCC
CCAGCTCCGG CAAGGCATTA AAGACTATTC CAACTGGCCC ACCATCCCGC AAGTGTACCT
CAACGGCGAG TTCGTGGGGG GCTGTGACAT TCTTCTGCAG ATGCACCAGA ACGGGGACCT
GGTGGAAGAG CTGAAAAAGC TGGGGATCCG CTCCGCCCTT TTAGATGAAA AGACAGACCA
AGACTCGAAG TGAGGGTGGC CCCGGGCGAG GGAGCCCCTG GGGTCAGAGA CTCACTGCCA
GAAAAGCCTT ACTGATTTGG GTGTCCCTCT TCAGACAGCT GCTTTGCACT GATTCTTCCA
GTCTGTAAGC AGCCCAGTGA TTTTAGGGTG TCTGGGGTTT GGGGCAAAGA AAAACTTCTT
GTGAACGTAA TTGTAACCAC TGCACTGTAA TTAATCACCA CTGCGGTGTT AGGAGATTGC
TGTAGACACA ATTCCTTCTT GTGTTGTCCT GTGTCCTGTG CCTGATTCCG AATCATTGTT
ACCATTCCCG AGTCTTCTGC AGATGTGTCA GTCCACAGAA GATATAGAAG CCCTCTCCTC
GGATTTTTGA AACCTGTTCC GTAAGAAAAT GATGGGACAG GAAGAACCTT TGATAACCCC
GGCTGTTGTT TTTTAAATAA ACCAATCCCG GGAAAAAAAA AAAAAAAAAG GGCCCCATTT
GCTTCAACCT TGAGGTCCCC GCCCCCCTCT AAGATTTCCC TTGGGGGGCC CCAAGCTTTA
GCCGTACCCC GCTTTTTTTG GTACAAGGGG GGGCCCCTAA TGGGGGAGTC CAATTTAAAA
CCCTAGGCCC CGGGGCCGTC GTTTTATCAA CCTTCCTGGA CGGGGAAAAA ACTGCCTCAC
CTTGGGGAAA TCTTTGGGAA AGGAAACACC TTACTTTTGG TGGGGGGGGA ACAAAAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGLRX5glutaredoxin 5 homolog (S. cerevisiae)1993e-51O
Contig/Assembly ProteinTXNL2thioredoxin-like 286.35e-17


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGlrx5glutaredoxin 5 homolog (S. cerevisiae)1964e-50O
Contig/Assembly ProteinTxnl2thioredoxin-like 287.43e-17


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC477869similar to Thioredoxin-like 2 protein (PKC-interacting cousin of thioredoxin) (PKCq-interacting protein) (PKC-theta-interacting protein)87.42e-17


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC505935similar to CG14407-PA1994e-51O
Contig/Assembly ProteinTXNL2thioredoxin-like873e-17
Contig/Assembly ProteinLOC506622hypothetical LOC50662270.53e-12O
Contig/Assembly ProteinLOC616291similar to Thioredoxin-like protein 2 (PKC-interacting cousin of thioredoxin) (PKC-theta-interacting protein) (PKCq-interacting protein) (HUSSY-22)59.36e-09O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010092H12ADR01_0092_H12.bDB789718 AK389549