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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-003249

Length: 967

Sequence [FASTA format sequence]
AATACCGAAT TAXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
AGAATTCTGG GTCTTGGAGA
TCTGGGTGTC TATGGAATGG GAATTCCAGT AGGAAAACTA TGTTTGTATA CAGCTTGTGC
AGGAATACGG CCTGATAGAT GTCTGCCTGT GTGTATTGAT GTAGGAACCG ATAATCCAGC
ACTCTTAAAA GACCCATTTT ACATGGGCTT ATATCAGAAA AGAGATCGAT CACAGCGTTA
TGATGATCTA ATTGATGAAT TTATGAAGGC CATTACTGAC AGATATGGAC GGAACATACT
TATTCAGTTT GAAGACTTTG GAAATCATAA TGCATTCAGG TTCTTGAGAA AATACCGAGA
AAAATATTGT ACCTTCAATG ACGATATTCA AGGGACAGCT GCAGTAGCTC TAGCTGGTCT
GCTTGCAGCC CAAAAAGTTA TTGGTAAATC CATCTCAGAA CACAAAATCT TATTTCTTGG
AGCGGGAGAG GCTGCTCTTG GAATTGCAAA TCTTATAGTT ATGGCTATGG TAGAAAATGG
CCTCTCGGAA GAAGAAGCTC AAAAGAAAAT TTGGATGGTT GACAAGTTTG GTTTATTATT
TAAGGGGCGG AAAGCTAAAA TAAACCGTCA TCAGGAACCG TTTGCTCACC CAGCCCCCAA
CAACATTCCT GATAATTTTG AAAAATCCGT TAATATACTT AACCCTTCAC CAATAATTGG
AATTTCCGGA ACTTGCCGAC TTTTTTCTCT TAATGGTATC CAAAACCATG GCTGAATTCC
TTGAAAGGGC CTATTAATTT TGGTTTTATT AATCCAACGC TACAGGTTGT ATTTTCCTCC
TAATAAACTT ATACACTTTC CAGGGGCCGT GTCCTTTATC CTATTGCCAT CTCCTTTTCC
CCATCGAACC TCTTTTTATT GGTTGTCTCT TACCCACTAT ACAATAATCT TTCACATTTT
TTCCCGAAGT AATTATCTTA TTTATTCTTT TCATAACAAG TTATAAATGT AACCTGTCTT
CTTATAATCT TCCAATCCTC TAATCAACTA TTTTTGAATA TAACACCCAT AT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinME2malic enzyme 2, NAD(+)-dependent, mitochondrial405e-116
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial2579e-69
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic2571e-71
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial2579e-69
Contig/Assembly ProteinLOC286239similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1792e-45
Contig/Assembly ProteinLOC286239similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1792e-45


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMe2malic enzyme 2, NAD(+)-dependent, mitochondrial378e-108
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)2615e-72
Contig/Assembly ProteinMe3malic enzyme 3, NADP(+)-dependent, mitochondrial2588e-69
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)2553e-70
Contig/Assembly ProteinMod1malic enzyme, supernatant2551e-69
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)2361e-64O
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)54.72e-10O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)424e-120
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)424e-120
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic2602e-72
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2588e-69
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2588e-69
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2562e-68
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2555e-68
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2532e-67
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2462e-65


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC507817similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)417e-117
Contig/Assembly ProteinLOC525813similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2401e-63
Contig/Assembly ProteinLOC540985similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1483e-39
Contig/Assembly ProteinLOC518268similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)76.63e-14


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010005C11AMP01_0005_C11.bBW955305