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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-011208

Length: 698

Sequence [FASTA format sequence]
NCCTTANANN NAACGATACT AAXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXX
ACA ACGAGGAGAC
TGCAGTCCTA GAGGCTGCCG AGCGTCCGAC TGCCTACTAA TATCCCCTGG CACAAAGGGC
CATATTCGAG TACCCGCTAT CTAGAGCCCA TGCTCTGCAG CGCGACAGTC CTGCGGGCGT
GCCTGCTCCT CTGTGTCCAG ATGCGAGATC GACACCAAAG GCATCCATGA ACTTCCTCGA
GAGTCTGGTG CAGCTGACGG GGGCTGTCTG ACTGCTCGAA AATCTGGGGC CTATCAGTAC
TTCGCCAATC TTCAGCGAAC CACCTGCCCA CCCAAATTAC AAGGGGAGCT CTGCGATACC
GACCCATCAC AGACCAGCTC TGAGGGGAAC GGTCTCTCTT ACAAAATGAC TGCCCATACC
AACTCTCGAG GCCAGCCCGG CCTGCCCAGG AACACTCGCT CTGACCTTCG GAGCACGTAC
CATGCCCTCG AGGCGGAAGC CCTGCAGCTG CGCCTGGGGA ATCACACTTA CTGCATGAAC
CCACACAATC CCAGAAGACT CTGATGCTAC GCGCAGGTAG GCCTGAACCC GCTTGTCCAA
TACTGCATGG TGTCCAACTG CATCGGAAGA GAGAGTCACC TGCCTGACTT TCAGGCAATA
GATCTCGTCT CTACTCCGGA ACTAGTATCA GTTCAGTGTC GCCTAACAGC TCTGATGCGC
CGCTTTACGA TCGTTGGGGC ACTATGTAGC ACCATCGAGC ACCCTGCCTA GCTTAGCGTC
TAGCTATCGA AAGCGTAGAG CACGCTCTGT CACCTAGGTG GGTGGTGGCA TGCTCATCAA
ACGCGCTGGG GGGACTGCGC GATCACTGCT TCATGTATTA CAACGTATGT AGACTACATG
GCCGACACGG AGTCGCAAAC CTTCCGCTCT GCATTCTTGA GTAAATGAAA TGGCGGAAGA
AAAGTCATCC TGCGCTCGAT TTCGTGCTGA AAGTCTTGCC TCACAGGAAG TGCCTTGCTA
GGCCCCTCCC CCAATGGCAA TGTGGACGCC TCCTCCTCCA AAAAAACCCC GAGTGGCCCC
CAGAATGGGG AGCCCATTTA GAAAAATTGG AACCTTCCCC TTCCAAAAAA AATCTCCCGT
TCACCAACAA AAAGGTTAAA TTTGTTTTTT CAAAGTTCCC CCCGGAGGGA AACACC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinPLAUplasminogen activator, urokinase1331e-31O
Contig/Assembly ProteinHGFACHGF activator57.88e-09
Contig/Assembly ProteinPLATplasminogen activator, tissue56.62e-08
Contig/Assembly ProteinPLATplasminogen activator, tissue56.62e-08O
Contig/Assembly ProteinPLATplasminogen activator, tissue56.62e-08
Contig/Assembly ProteinF12coagulation factor XII (Hageman factor)53.12e-07


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinPlauplasminogen activator, urokinase1162e-26O
Contig/Assembly ProteinF12coagulation factor XII (Hageman factor)61.29e-10
Contig/Assembly ProteinPlatplasminogen activator, tissue57.81e-08
Contig/Assembly ProteinHgfachepatocyte growth factor activator50.81e-06


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinPLAUplasminogen activator, urokinase1432e-34
Contig/Assembly ProteinLOC489090similar to Coagulation factor XII precursor (Hageman factor) (HAF)59.73e-09
Contig/Assembly ProteinLOC482840similar to Tissue-type plasminogen activator precursor (tPA) (t-PA) (t-plasminogen activator)55.84e-08
Contig/Assembly ProteinHGFACHGF activator55.16e-08
Contig/Assembly ProteinHGFACHGF activator55.16e-08
Contig/Assembly ProteinHGFACHGF activator55.16e-08


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinPLAUplasminogen activator, urokinase1414e-34O
Contig/Assembly ProteinPLATplasminogen activator, tissue55.15e-08
Contig/Assembly ProteinF12coagulation factor XII50.41e-06
Contig/Assembly ProteinF12coagulation factor XII50.12e-06
Contig/Assembly ProteinF12coagulation factor XII50.12e-06
Contig/Assembly ProteinF12coagulation factor XII50.12e-06


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinPLAUplasminogen activator1924e-51O
Contig/Assembly ProteinF12factor XII59.77e-11
Contig/Assembly ProteinPLATT-plasminogen activator54.33e-09


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
DCI010085E10DCI01_0085_E10.b