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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-013913

Length: 1,039

Sequence [FASTA format sequence]
NNNGGCTGAA CXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXGGCTG
GGTTACGGCG GGTCGGTTGG TGTGTCTTTC AGCGTCGATT TCTGTGCAGT TGAACGCCTG
CCATGGCTGA TTTAGATCCG TTCGGCGCCC CCGCCGGCCC CTCGCTGGGG AACGGAGTGG
CCGGCGAGGA GGACCCGGCC GCGGCCTTCT TGGCGCAGCA GGAGAGCGAG ATTGCTGGCA
TCGAGAACGA CGAGGCCTTC GCCATCCTGG ACGGAGGCGC TCCTGGGCCC CAGCCGCACG
GCGAGCCGCC GGGGGGTCCG GATGCCGTTG ATGGAGTGAT GAATGGCGAA TACTACCAGG
TACAGAATAT GATTATGTTG AATGATAGTG CTTGAGAGTC TTTCTCTCCT GTGATTCGAA
TTGATTGGCC TAGAAAGGAC TGCACTCCTC TGACTTTCCT GGATATATTA GTAACTGGTA
TGTTACCTCC CAAAGTAGAA GGGTTTGAAG AGAAGTGACA TTGATAGGGC CTTCTTTTAA
AATGTGATTG ACCCGGCCCT AGTGGTACCA ACTTTATTCT CAAGAAATGA CCCTTCATGA
TGATGGTGGT GGTGGTGGTG GTGGCAGCAG TAGCCACAGC TAATTTATAC ACTATGTGCC
GCGCACTGCG TCAAGCACTG TTCATGCTGA ATCTTCAGTT CTCCCAACAA CCTGAGGGAC
CTATACTATT ATTATTCCCG TTTACAGATG AATAAACTGA GGCACACAGA GATTAAACCA
GGAGCCTNGA AATAACAGGT AGTATGTGGT GGGGCCAGCA TTTGATCCTT TGAGCTTTCA
GATTGTATTG AGGGTGAGGG TGGCTGATAT TCCTGATGCC TACCGTTATT TCCCCTCTGT
ATCGCTAAGC TTTGGGTATC AGATCACCTT GCATCGGGCT TTATTATAAA AATTTACTAG
TCGATAGAAT TGAAGAGTCC TAAACGAGGC TCAGGTTCCT TGGACTGGGA CTCGGACTCA
TTTCCTCTAG GACTCTGTTT CTGCAGGCTC CGGGGGCAGT TTTGCCCCGG TCCTAATGGC
AGAAAACCCT AGCCCCCTCG GGCCTCTTGG TGGCAGGTCT AACTACAAGA CAACGTGGAT
TTTTTCCGAC CATTAAGTCC GGTTTTCCTT GGACCAAGGG AGTGATCCCG GGGCTGGGGA
AAAACTTGGT GCCTGCTTTG CCTGGGTTTG TCCCCTTAAC CATTTCTGGN AAAGGAAAGG
TTTTCCATTT TTTACCCAAA AAAGTCCGGG CCCAAAAAAC TTTTACGTGG GCGAGGGCCC
TGCAACTTCG TTTTGAACCC TGGACTTGTA GGGGAACCCT TCCACAATTT CTAAAGGGGC
GCAATCCCCG GCCGGGTAAA CCAAACAGAG GGGGTC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)1094e-24O
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)1094e-24O
Contig/Assembly ProteinCLTBclathrin, light polypeptide (Lcb)55.57e-08O
Contig/Assembly ProteinCLTBclathrin, light polypeptide (Lcb)55.57e-08O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCltaclathrin, light polypeptide (Lca)1034e-22O
Contig/Assembly ProteinCltbclathrin, light polypeptide (Lcb)521e-06O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1095e-24O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1095e-24O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1095e-24O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1095e-24O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a88.69e-18O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a88.69e-18O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a56.25e-08O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a55.59e-08O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a55.59e-08O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a55.59e-08O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)1111e-24O
Contig/Assembly ProteinCLTLBclathrin, light polypeptide B (light chain B)58.21e-08O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ITT010065D10ITT01_0065_D10.bBW981782 AK345126