[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-016146
Length:
1,176
Sequence:
[FASTA format sequence]
TTATATATTA GGCTTAGTGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XGAGCTGACC GCGACGCAGG TGGACCATGT
GGACCCTGGT GAGCTGGGTG GCCTTGGTGA CAGGGCTGGT GGCTGGAACA CAGTGCCCGG
ATGGTCAGCT CTGCCCCGTG GCCTGCTGCC TGGACCCGGG AGGAGCCAGC TACAGCTGCT
GCAATCCCGT TCCGGACAAG TGGCCCAAGG CACTGAGCCA GCATCTGGGC GTACCCTGCA
AGACTAAAGC CCAGTGCCCT CCTGGCCACT CCTGCATCCT CACCACCAAT GAGACCTCCA
ACTGCTGCCC GTTCCCAGAG GCCGTGTCAT GCAGGGATGG CCTCCACTGC TGCCCCCACG
GCACCTCCTG TGACCTGGCC CATTCCCGCT GCCTCACAGT GACCAACACC CACCCCATGG
CAAAGATCCC TTCACAAGAG ACTATAAAGA CAGCCGTCCA GTGCCCAGAT GCAGAGTCCC
AGTGCCACAA TAATTCCACC TGCTGCAAGC TGTCCAGTGG AAAGTATGGC TGCTGCCCGT
TGCCCAATGC CACCTGCTGC TCCGATCACA TACACTGCTG CCCCCACGGC TTTGTGTGTG
ACCCGGTCAA GAAGGAGTGC TTCTCCAAGG AGAATGAAGC CATAGACTTC TTCACCAAGT
TGCCAGCGCA CTCAGTGCAG GAGGTGAAGT GTGACACAGA GGTGAGCTGC CCGGACGACT
ACACCTGCTG CCGCCTGCAG TCCGGAAAAT GGGGCTGCTG CCCTTTTGTC CAGGCTGTCT
GCTGTAACGA CCACGTACAC TGCTGCCCGA CCGGATATCA GTGTAACATA GAGAAAGGCA
CCTGTGACCT GGAGACCCAG TGGGTGCCCT GGAAGGAAAA AATCCCGGCC AGCCTCAGCC
GGCCGGAACT CCCTACCCTG GAAAAAAAAT GCCCCCTGGG GAAAACGTCT TCCACCTGTC
CCCTCCTCCC ATTACCTGCT TGTCCCGTTC CCCGCCCTGG GAAAAGTGGG GGGTTGCCTG
TTCTTGCCCC CCAAAAAAGG CTTTTCTGGC CGGCCTCCGG AACCACCCCA AAAAACCTGC
CTTGGCCCCC CCAAGGGGGG CCCCCCACCC CTTTGTTTGT TCCGCGCCAA AAGGGGGGAA
ACCCCCTGTT TTAAAAAAAA AAAAAGAAAA AAAAAAAAAA AGAAGGGAAA AAACTAGGTG
GGGGGGG
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
GRN | granulin | 380 | e-106 | O | ||
GRN | granulin | 380 | e-106 | O | ||
KRTAP10-1 | keratin associated protein 10-1 | 54.7 | 2e-07 | O | ||
KRTAP10-7 | keratin associated protein 10-7 | 54.3 | 2e-07 | |||
MEGF10 | multiple EGF-like-domains 10 | 52.4 | 7e-07 | |||
KRTAP10-6 | keratin associated protein 10-6 | 52 | 1e-06 | |||
LTBP2 | latent transforming growth factor beta binding protein 2 | 50.4 | 3e-06 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Grn | granulin | 328 | 7e-90 | O | ||
Megf10 | multiple EGF-like-domains 10 | 56.6 | 5e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 56.2 | 6e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 56.2 | 6e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 56.2 | 6e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 56.2 | 6e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 56.2 | 6e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 56.2 | 6e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 56.2 | 6e-08 | |||
Megf6 | multiple EGF-like-domains 6 | 54.7 | 2e-07 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC480501 | similar to granulin isoform 1 precursor | 360 | 1e-99 | |||
LOC489619 | similar to EGF-like-domain, multiple 3 | 57.8 | 2e-08 | |||
LOC474665 | similar to MEGF10 protein | 56.6 | 5e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC616459 | similar to EGF-like-domain, multiple 3 | 51.2 | 2e-06 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
FBN1 | fibrillin 1 | 43.9 | 7e-06 |
|