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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-016953

Length: 1,272

Sequence [FASTA format sequence]
TTCGGGGGCA TGGACATGAC AGTTTGTACX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX X
GGAAGGCCC GCCGGACCGC TGGGGTTGGA GCTACCGCTG
CGGTGATGGC GCATGAAGGC TCGAGGCAGG AGAGGCAGGC ACGAGACCGC GGGATGACTC
GATCCAAGGC GGAAAAGGTC CGGCCGCCAA CAGTTCCGGT GCCACAGGTG GACATCGTGC
CTGGGCGGCT TACTGAGGCC GAGTGGATGG CGCTCTCGGT TCTTGAAGAG GGCGAGGAAG
TGGTGGGGGA CATCTTGGCT GATCTGCTGG CCCGAGTCAT GGACTCCGCC TTCAAAGTCT
ACCTGACCCA GCAGTGCATT CCATTCACCA TCAGTCAGGC ACGGGAGGCC ATGCTGCAGA
TCACCGAGTG GCGCTTCCTG GCCCGGGACG AGGGAGAAAC TGTAGTGGCA GAGGACCCTA
CGTGGGGAGA GGACGAAGAA CCTTCCGCTT GCACGACGGA CGCCTGGGCT CAGGGATCCG
TGCCCGTGCT GCACGCGCCC ACCTCGGTGG GGCTGGAGGA GACCTTCCCA GGCGAAGACC
GAGGGAGCGT GGATCAGATC ACTTTAGGAA GATCGTGGAT GGATACAGGC TCTCAGGAAC
CGATGGAACC TTGGGACCGC TGTCTTCCAG AGCAGAGGGT CGTCCCCTCA TCCACCCTGG
AGCTGCTTAA GGAGACAGGG CCTCGAGGTC CTTTAGAGGA ATTGGAACTG GACGGCCAGG
CGAGGGGCCA CCTCTCCTCG GTCGGATGCT TGACCGTGAG CAGCCAACTG TCGATGGAGA
TGGCGGTCGC ANGCGGTCCT CACCTTTCTC TGGAGCCGAC CCCGGTTGCC AGCCCCCAGG
GCTCGNTCGA GAAGGCACAG CCCCTCAGCT CCCCGTTCTC TCTCGAGGAC CTCTACTATT
GCACGCCCCA GGCTCAGGCG GCTGGAGACA GGATGGAGCC CAAGAAGGAA GAAGTGCCCC
TCATCTCCTC GAGCGGTTCG GTGTCTGGAA CTTCTGCTGG TGGTCTCACA CCCTCAGCTC
CTCTTCTGGG TTCAGCCGCA CAACTTTGGG CCCGAATCGC GGCCCACTCC ATTCCGGCAA
AATGGCCCAG CCGGAAATGA GCGCTGGACC CCGCGCTGCT CCCCCTGTTG CCCCCTGGCG
AGTTCTGCCC AACTCAAATC CCCCAAAAGC AACGGGTGCG TAAACGGAAA AAAGCCGGCG
TCCAACCCGG CCAATCCGTT CCCAAAATTA CCTCCGCGGG TCTTTAAGTG CCCGGGAACT
TTCCCTATAT GGGACCGCGT TTGAAGGCCC CCTGGCGCTC TCCACGGGCA GGAGAAACA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC388963similar to short-chain dehydrogenase/reductase 1370e-102
Contig/Assembly ProteinLOC388963similar to short-chain dehydrogenase/reductase 1370e-102O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly Protein1700003E16RikRIKEN cDNA 1700003E16 gene3002e-81O
Contig/Assembly Protein1700003E16RikRIKEN cDNA 1700003E16 gene1681e-41O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475790similar to Retinol dehydrogenase 122795e-75O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LNG010064D03LNG01_0064_D03.bBP436151 AK345576