[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-020207
Length:
1,067
Sequence:
[FASTA format sequence]
TTAAACGCAT TAGTGXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXACTGGC ATTTCTAATC CTTTGGAGAA CAGAGAAGTA
AAATTCAAAG GCAGTTAAAT CAGAAGTGTT TGAAATCTGA CATCTACTCC CAAACAAGCA
TTTCTCAGGA GGCCCCCATA CCATGTGGCT GTACCTGGCT GTCCTCGTGG GCCTGTACTA
CCTCCTTCGC TGGTACCGGG AAAGGCAGAT GGTTAGCCAC CTTGGGGATA AGTATGTCTT
CATCACGGGC TGTGACTCGG GCTTCGGGAA CCTGCTGGCC AGGCAGCTGG ATGTGAGGGG
CCCAGCTGGA GACGGTGCTC TTGGACGTGA CCAAGACAGA GAGCATTGCT GCAGCCACCC
AGTGGGTGAA GGAGCGTGTC GGGGACAGAG GACTCTGGGG TCTGGTCAAC AATGCAGGCA
CTTTTCACCC ACTGTGCATC ACTGAGTGGC TGAAGACTGA GACCTGGATA CATACCCTCA
AAGTGAACCT CATTGGTGTG ACAGAGGTGA CCTTGAGCAT GCTTCCCTTG GTGAAGAAAG
CACAGGGGAG AATTGTCAAT GTCTCCAGCA TTCTGGGAAG AGTTGCTTTC TTTGGAGCAG
TCTACTCTAG CTCCAAGCAT GGAGTGGAAG CCTTTTCAGA TGTCCTGAGA TGTGAGCTTC
AGCATTTTGG GGTGAAAGTC AGCATAGTTG AACCTGGTTA CTTCAGAACA GGAATGACAG
ATGTGCAGAA GTCCTCAGAG GCAATGAAGC AAGTCTGGAA AGAAGTCCCT GCTCATATTA
AGGACACCTA TGGACAGAAG TTTTTTGATG CCTATCACGA TGTTATGAAA CAAGGGCTGT
CTAGTTGTAG CACAAACCTG AACCTGGTCA CGGACTGCAT GGAACACGCT CTGACATCTG
TGCATCCCCG CACTCGGTAC TCAGCTGGCT GGGATGCTCA ATTTTTTCTC ATCCCTCTGT
CTTATTTACT TACATCCCTG GGAAACTACA TACTGAACTA AATCTTGGGC CCAAACCATT
GCCAGGCATT TAAAAAAAAA TTTTTTTTGT GGGCCCTTCA AACAAAAAAA AAAAAAAATC
TTAAAATTTT TTTATTTTCC TCAATTAAAC
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
HSD17B6 | hydroxysteroid (17-beta) dehydrogenase 6 | 358 | e-116 | O | ||
RDH16 | retinol dehydrogenase 16 (all-trans) | 253 | 6e-83 | O | ||
DHRS9 | dehydrogenase/reductase (SDR family) member 9 | 221 | 1e-65 | O | ||
DHRS9 | dehydrogenase/reductase (SDR family) member 9 | 221 | 1e-65 | O | ||
SDR-O | orphan short-chain dehydrogenase / reductase | 221 | 8e-69 | O | ||
RDH5 | retinol dehydrogenase 5 (11-cis/9-cis) | 205 | 1e-59 | O | ||
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 148 | 5e-40 | |||
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 148 | 5e-40 | |||
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 148 | 5e-40 | |||
HSD11B2 | hydroxysteroid (11-beta) dehydrogenase 2 | 114 | 4e-29 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Hsd17b9 | hydroxysteroid (17-beta) dehydrogenase 9 | 321 | e-104 | O | ||
Rdh1 | retinol dehydrogenase 1 (all trans) | 276 | 2e-88 | O | ||
Rdh9 | retinol dehydrogenase 9 | 275 | 1e-87 | O | ||
Rdh7 | retinol dehydrogenase 7 | 274 | 7e-89 | O | ||
Rdh16 | retinol dehydrogenase 16 | 273 | 5e-87 | O | ||
Rdhs | retinol dehydrogenase similar | 271 | 1e-87 | O | ||
BC089597 | cDNA sequence BC089597 | 268 | 1e-85 | O | ||
Dhrs9 | dehydrogenase/reductase (SDR family) member 9 | 224 | 7e-67 | O | ||
Sdro | orphan short chain dehydrogenase/reductase | 219 | 4e-68 | O | ||
Rdh5 | retinol dehydrogenase 5 | 215 | 1e-62 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC481118 | similar to 3-hydroxysteroid epimerase | 367 | e-119 | O | ||
LOC481118 | similar to 3-hydroxysteroid epimerase | 357 | e-115 | O | ||
LOC474409 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 264 | 4e-88 | O | ||
LOC474409 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 256 | 8e-86 | O | ||
LOC481119 | similar to orphan short-chain dehydrogenase / reductase | 234 | 9e-73 | O | ||
LOC488391 | similar to NADP-dependent retinol dehydrogenase/reductase | 230 | 1e-68 | |||
LOC481099 | similar to 11-cis retinol dehydrogenase (11-cis RDH) | 214 | 4e-63 | |||
LOC488037 | similar to 3-hydroxybutyrate dehydrogenase precursor | 145 | 3e-39 | O | ||
LOC489690 | similar to hydroxysteroid (17-beta) dehydrogenase 2 | 120 | 3e-30 | |||
HSD11B2 | hydroxysteroid (11-beta) dehydrogenase 2 | 115 | 2e-27 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
MGC127926 | similar to 3-hydroxysteroid epimerase | 392 | e-125 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 261 | 8e-87 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 261 | 8e-87 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 261 | 8e-87 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 261 | 8e-87 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 256 | 3e-85 | O | ||
LOC522844 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 250 | 2e-82 | O | ||
LOC538876 | similar to orphan short-chain dehydrogenase / reductase | 232 | 1e-72 | O | ||
RDHL | NADP-dependent retinol dehydrogenase/reductase | 229 | 1e-68 | O | ||
RDH5 | retinol dehydrogenase 5 (11-cis and 9-cis) | 202 | 5e-58 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
HSD11B2 | hydroxysteroid 11-beta dehydrogenase 2 | 120 | 8e-33 |
|