[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-021637
Length:
491
Sequence:
[FASTA format sequence]
CGGCGCCCAT CCCCGCCGGG GCCGCGCCNA CGCCCACCCC CTACCTCCCC CCACCCCCCC
CCCCCCGCCC CTCATTGTCA AACANAGGCT GGTACGGTCT CTAGTCCTCA AACCTGCTGG
CCTACCGGAC TTGTTACATT TCTAGTCCTT TGGACAACAG AAATCTCAAT TCAAAGGCAG
TTCCATCAGA AATGTTTGAA ATCTGACATC TACTCCCAAA CAAGCATTTC TCAGGAGGTC
CCCATACCAT GTGGCTGTAC CTGGCTGTCC TCGTGGGCCT GTACTACCTC CTTCGCTGGT
ACCGGGAAAG GCACATGCCT ACCCACCTTG CGGATAAGTA TGTCTTCCTC ACGGGCTGTG
ACTCGGGCTT TGGCAACCTG TTGGCGAGGC AGCTGCATGT GACGGCNTTG AGGGTCCTGC
CTCGCTGTCT GACAGAGCAC GCGTGCGCTC ACCTGAGGAA GCAGACCCCA CACCCGCTGG
ACACGGTGCT CTTGGCAGTG ACCAAGACAG AGAGCATTGC TGCCGTCACT TGCTGCTTGA
AGGAGCGTGT CGGGGACACA TGATTCTGCT GTCTGGTCAA CACTGCTGGC ACTTTTCACC
CACTCTGCAT CACCTCATGG CTGAAGACTG CCACCTGGAT ACATACTCTT ACCCTGAACC
TCATTGGCGT GACACAGGCC CACCTTTCAC CCGCTTCCTT TATCTCAAAC ATCACCTGGT
ATAACTGTCA ATGCTTCCCC TCATCTAGCA ACAGCCGGTT TCCCGTACCG CCCCCCCTCC
CTCCAACTAT CGACGCCACC CTTTTAGATG TCCTCCACCC TCCA
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
HSD17B6 | hydroxysteroid (17-beta) dehydrogenase 6 | 103 | 9e-23 | O | ||
RDH16 | retinol dehydrogenase 16 (all-trans) | 102 | 2e-22 | O | ||
SDR-O | orphan short-chain dehydrogenase / reductase | 82 | 2e-16 | O | ||
DHRS9 | dehydrogenase/reductase (SDR family) member 9 | 65.1 | 3e-11 | O | ||
DHRS9 | dehydrogenase/reductase (SDR family) member 9 | 65.1 | 3e-11 | O | ||
RDH5 | retinol dehydrogenase 5 (11-cis/9-cis) | 56.6 | 1e-08 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Hsd17b9 | hydroxysteroid (17-beta) dehydrogenase 9 | 103 | 6e-23 | O | ||
Rdh7 | retinol dehydrogenase 7 | 98.6 | 3e-21 | O | ||
Rdhs | retinol dehydrogenase similar | 97.8 | 5e-21 | O | ||
AY053573 | cDNA sequence AY053573 | 95.5 | 2e-20 | O | ||
Rdh1 | retinol dehydrogenase 1 (all trans) | 95.1 | 3e-20 | O | ||
Rdh16 | retinol dehydrogenase 16 | 92 | 3e-19 | O | ||
BC089597 | cDNA sequence BC089597 | 91.7 | 3e-19 | O | ||
Rdh9 | retinol dehydrogenase 9 | 91.7 | 3e-19 | O | ||
Sdro | orphan short chain dehydrogenase/reductase | 82.8 | 2e-16 | O | ||
Dhrs9 | dehydrogenase/reductase (SDR family) member 9 | 69.3 | 2e-12 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC481118 | similar to 3-hydroxysteroid epimerase | 108 | 3e-24 | O | ||
LOC474409 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 108 | 2e-24 | O | ||
LOC474409 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 108 | 2e-24 | O | ||
LOC481118 | similar to 3-hydroxysteroid epimerase | 108 | 3e-24 | O | ||
LOC481119 | similar to orphan short-chain dehydrogenase / reductase | 85.9 | 2e-17 | O | ||
LOC488391 | similar to NADP-dependent retinol dehydrogenase/reductase | 64.7 | 4e-11 | |||
LOC481099 | similar to 11-cis retinol dehydrogenase (11-cis RDH) | 58.9 | 2e-09 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 105 | 2e-23 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 105 | 2e-23 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 105 | 2e-23 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 105 | 2e-23 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 105 | 2e-23 | O | ||
MGC127926 | similar to 3-hydroxysteroid epimerase | 103 | 9e-23 | O | ||
LOC522844 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 100 | 4e-22 | O | ||
LOC614621 | similar to retinol dehydrogenase 16 | 100 | 4e-22 | O | ||
LOC519718 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 100 | 6e-22 | O | ||
LOC538876 | similar to orphan short-chain dehydrogenase / reductase | 88.2 | 3e-18 | O |
Locus | Definition | Score | E value | FL |
---|
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