[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-021932
Length:
478
Sequence:
[FASTA format sequence]
TTGTCXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXTA
GTCTCAGTAT TTCCTTCTCA CTTGTTACAT TTCTAATCCT TTGGAGAACA GAGAAGTAAA
ATTCAAAGGC AGTTAAATCA GAAGTGTTTG AAATCTGACA TCTACTCCCA AACAAGCATT
TCTCAGGAGG CCCCCATACC ATGTGGCTGT ACCTGGCTGT CCTCGTGGGC CTGTACTACC
TCCTTCGCTG GTACCGGGAA AGGCAGATGG TTAGCCACCT TGGGGATAAG TATGTCTTCA
TCACGGGCTG TGACTCGGGC TTTGGGAACC TGCTGGCGAG GCAGCTGGAT GTGAGGGGCT
TGAGGGTCCT GGCTGCATGT CTGACGGAGC AAGGGGCCCA GCAGCTGAGG AAGCAGACGT
CAGACAGGCT GGAGACGGTG CTCTTGGACG TGACCAAAAC AGAGAACATT GCTGCCGCCA
CCCAGTGTGT GAAGGAACAC GTGGGCGAAA GAGAAATCTG AGGTCTGAGA CACAAGGCGT
GGACAATACG AGGAGTGTGA GTGAGCGACA AAATGCGCGC GCGGAGTGGA AACATCCCCA
TTAGGTAACC ACCCCAGAGT GCTGAGTAGA GCCACCAATC CTTGAGCACT TAAACGCGAA
GTAAAAATAA TGGAGCGTGA TCGACAACCG CAAAGTGCAC CATATGTACA AGAAAGCAGT
GAGGGAGAGT GACGCTATAA CAATGCACAC AGAAAGGATG CCAAAGAGAT AGTGAAGCAC
ATCGCGGCAA GGAAGT
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
HSD17B6 | hydroxysteroid (17-beta) dehydrogenase 6 | 160 | 6e-40 | O | ||
RDH16 | retinol dehydrogenase 16 (all-trans) | 147 | 3e-36 | O | ||
SDR-O | orphan short-chain dehydrogenase / reductase | 117 | 4e-27 | O | ||
DHRS9 | dehydrogenase/reductase (SDR family) member 9 | 104 | 3e-23 | O | ||
DHRS9 | dehydrogenase/reductase (SDR family) member 9 | 104 | 3e-23 | O | ||
RDH5 | retinol dehydrogenase 5 (11-cis/9-cis) | 90.1 | 7e-19 | O | ||
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 59.7 | 1e-09 | O | ||
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 59.7 | 1e-09 | O | ||
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 59.7 | 1e-09 | O | ||
HSD11B2 | hydroxysteroid (11-beta) dehydrogenase 2 | 54.7 | 3e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Hsd17b9 | hydroxysteroid (17-beta) dehydrogenase 9 | 156 | 8e-39 | O | ||
Rdh7 | retinol dehydrogenase 7 | 151 | 3e-37 | O | ||
Rdhs | retinol dehydrogenase similar | 149 | 1e-36 | O | ||
AY053573 | cDNA sequence AY053573 | 148 | 2e-36 | O | ||
Rdh1 | retinol dehydrogenase 1 (all trans) | 147 | 6e-36 | O | ||
Rdh16 | retinol dehydrogenase 16 | 147 | 6e-36 | O | ||
Rdh9 | retinol dehydrogenase 9 | 143 | 7e-35 | O | ||
BC089597 | cDNA sequence BC089597 | 140 | 4e-34 | O | ||
Sdro | orphan short chain dehydrogenase/reductase | 117 | 4e-27 | O | ||
Dhrs9 | dehydrogenase/reductase (SDR family) member 9 | 110 | 8e-25 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC474409 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 162 | 1e-40 | O | ||
LOC474409 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 162 | 1e-40 | O | ||
LOC481118 | similar to 3-hydroxysteroid epimerase | 159 | 1e-39 | O | ||
LOC481118 | similar to 3-hydroxysteroid epimerase | 159 | 1e-39 | O | ||
LOC481119 | similar to orphan short-chain dehydrogenase / reductase | 123 | 7e-29 | O | ||
LOC488391 | similar to NADP-dependent retinol dehydrogenase/reductase | 102 | 2e-22 | |||
LOC481099 | similar to 11-cis retinol dehydrogenase (11-cis RDH) | 97.4 | 5e-21 | O | ||
LOC488037 | similar to 3-hydroxybutyrate dehydrogenase precursor | 60.1 | 9e-10 | O | ||
LOC489690 | similar to hydroxysteroid (17-beta) dehydrogenase 2 | 53.9 | 7e-08 | |||
HSD11B2 | hydroxysteroid (11-beta) dehydrogenase 2 | 50.1 | 1e-06 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 157 | 4e-39 | O | ||
LOC519718 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 157 | 3e-39 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 157 | 4e-39 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 157 | 4e-39 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 157 | 4e-39 | O | ||
LOC519940 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 157 | 4e-39 | O | ||
MGC127926 | similar to 3-hydroxysteroid epimerase | 154 | 3e-38 | O | ||
LOC614621 | similar to retinol dehydrogenase 16 | 153 | 5e-38 | O | ||
LOC522844 | similar to microsomal NAD+-dependent retinol dehydrogenase 4 | 153 | 7e-38 | O | ||
LOC538876 | similar to orphan short-chain dehydrogenase / reductase | 124 | 4e-29 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
HSD11B2 | hydroxysteroid 11-beta dehydrogenase 2 | 60.1 | 3e-11 |
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