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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-027796

Length: 1,113

Sequence:  [FASTA format sequence]
TTTTGGCATG GACTATNACX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXGACAATGG GCCCTGCAAG CAGGTGTGCA CTGTCATCAG
GGACACCGTC ATGTGCTCCT GCTTCCCTGG CTACGCCATC ATGGCAGACG GCGTGTCCTG
CGAAGACATC AACGAGTGCG TGACGGATAT GCACACATGT AGCCGGAGCG AGCACTGCGT
GAACACGGTG GGTTCCTTCC GCTGCTACAA GGCTCTTACC TGTGAGCCTG GCTATATGCT
CAAGGATGGC GAATGTACAG ATGTGGATGA GTGTGAGCTG GGCACGCACA GCTGCCAGGT
GGGCTTCACG TGCCAGAACA CCAAGGGCTC CTTCTACTGC CAGCCAAGGC AGCGCTGCAT
GGACGGCTTC CTGCAGGACC CTGAGGGCAA CTGCGTGGAC ATCAATGAGT GCACATCACT
CTCTGAGCCC TGCCAGCCTG GCTTCAGCTG CGTCAACACG GTGGGCTCCT ACACGTGCCA
GAGAAACCCG CTCATCTGTG GGCGTGGCTA CCATGCCAGC CAGGACGGGA CCAAGTGTGT
GGATGTGAAT GAGTGTGAGA CAGGCGTGCA CCACTGCAGC GAGACCCAGG TGTGCCACAA
CCTCCCTGGC TCCTACCGAT GCGACTGCAA GGCTGGCTTC CAGCGGGACG CCTTCGGCCG
GACCTGCATT GACGTGAATG AGTGCTGGGC CTCGCCCAGC CGCCTGTGCC AGCACACCTG
CGAGAACACA CTTGGCTCCT ACCGCTGTTC CTGTGCCTCT GGCTTTGTGC TGGCTGCCGA
TGGAAAGCAC TGTGAAGATG TGAACGAGTG TGAGGCACAG CGCTGCAGCC AAGAGTGCGC
CAACATCTAC GGCTCCTACC AGTGCTACTG CCGCCAGGGC TACCAGCTGG CCGAAGACGG
GCACACCTGC ATAGACATTG ATGAGTGTGC TCAGGGTGCC GGCGTCCTCT GCACTTCCGC
TGCATCACGT GCCAGGGACC TACCATGTGC ATGCCCGGAG CGTGGCTACC CATGACACCC
AAGGGAAGTT CTGCAAGACC TGGACAATTG TCCCTGGGCA CCCAAATTGC TCCAAGGCGA
AACTGCCAAA AATCCAGGGA ACTTCCGCTG CTGCCTTTTA TTCCCCCCCA ATAATTCCCC
TTCCAAACAA ATTGGAAGCC CCCCGTCCAG AATTTTGAAG TGCAAAACCC CCCGCCCATA
AACCAACCCC TATTTCCAAG AGGGTTGGTG CCCACATATT TAATAACGGG GCCCTT

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		FBLN2	fibulin 2	655	0.0
		FBLN2	fibulin 2	633	0.0
		FBLN1	fibulin 1	431	e-121
		FBLN1	fibulin 1	431	e-121
		FBLN1	fibulin 1	431	e-121
		FBLN1	fibulin 1	431	e-121
		FBN2	fibrillin 2 (congenital contractural arachnodactyly)	232	5e-61
		FBN1	fibrillin 1	231	8e-61
		FBN3	fibrillin 3	215	6e-56
		HMCN1	hemicentin 1	210	2e-54

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Fbln2	fibulin 2	622	e-178
		Fbln1	fibulin 1	431	e-121
		Fbn2	fibrillin 2	232	5e-61
		Fbn1	fibrillin 1	228	9e-60
		Ltbp1	latent transforming growth factor beta binding protein 1	199	6e-51
		Ltbp2	latent transforming growth factor beta binding protein 2	199	3e-51
		Ltbp1	latent transforming growth factor beta binding protein 1	199	6e-51
		Ltbp4	latent transforming growth factor beta binding protein 4	198	7e-51
		Efemp2	epidermal growth factor-containing fibulin-like extracellular matrix protein 2	191	2e-48	O
		Megf6	multiple EGF-like-domains 6	184	1e-46

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC484634	similar to fibulin 2 precursor, isoform a	647	0.0
		LOC474468	similar to Fibulin-1 precursor	429	e-120
		FBN1	fibrillin 1	232	4e-61
		FBN1	fibrillin 1	232	4e-61
		FBN1	fibrillin 1	232	4e-61
		LOC481491	similar to fibrillin 2 precursor	232	6e-61
		FBN1	fibrillin 1	232	4e-61
		FBN1	fibrillin 1	232	4e-61
		LOC490784	similar to latent transforming growth factor beta binding protein 2	210	2e-54
		LOC490784	similar to latent transforming growth factor beta binding protein 2	210	2e-54

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LOC511854	similar to fibulin 2 precursor, isoform a	641	0.0
		LOC514588	similar to fibulin 1 isoform C precursor	425	e-119
		LOC514588	similar to fibulin 1 isoform C precursor	416	e-116
		LOC514588	similar to fibulin 1 isoform C precursor	360	1e-99
		FBN1	fibrillin 1	232	3e-61
		LTBP2	latent transforming growth factor beta binding protein 2	214	1e-55
		LOC519259	similar to fibrillin 2 precursor	206	3e-53
		LOC540017	similar to fibrillin 2 precursor	205	5e-53
		LOC510559	similar to latent transforming growth factor beta binding protein 1 isoform LTBP-1S	194	1e-49
		LOC535222	similar to EGF-containing fibulin-like extracellular matrix protein 2 precursor (Fibulin-4) (FIBL-4) (UPH1 protein)	193	2e-49	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		FBN1	fibrillin 1	218	3e-58
		EGF	epidermal growth factor	102	1e-23
		CD97	CD97 antigen	70.9	5e-14
		TNC	tenascin C	55.5	2e-09