[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-027815
Length:
1,085
Sequence:
[FASTA format sequence]
NNTTTGCATG GACTATNACX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XTGGGATTTG GAGGCTCAAG AAGAGATTCT GCATCAGGAA
GGCCACAGCA TGGGTGTGTA CGACATTGCC TTCCATCAAG ATGGCTCTTT GGCTGGCACC
GGGGGACTGG ATGCATTTGG TCGAGTTTGG GACCTGCGCA CGGGACGTTG TATCATGTTC
CTCGAAGGCC ACCTGAAGGA GATCTATGGA ATAAATTTCT CCCCCAATGG CTACCACATT
GCAACTGGCA GTGGTGACAA CACCTGCAAA GTGTGGGACC TTCGGCAACG GCGTTGTGTC
TATACCATTC CTGCCCATCA GAACTTAGTA ACTGGTGTCA AGTTTGAGCC TATCCATGGG
AATTTCTTGC TCACTGGTGC CTATGATAAC ACAGCCAAGA TCTGGACCCA CCCAGGCTGG
TCCCCACTGA AGACCTTGGC CGGCCATGAA GGCAAAGTGA TGGGCCTAGA CATTTCTTCC
GATGGGCAGC TCATAGCCAC TTGTTCATAT GACAGGACCT TCAAGCTCTG GATGGCCGAA
TAGGCAGGAC CATAGAAAAA GGACGCTACC TCCCTCTCAC AGAGCCATTT TCAAAAGAAA
GGAATCGATG TGTTTTGTTC TATCATGTTT TTGCCAGTTA CCATGCATAG ATCCGCAAAA
GAGTTGGATT TCCACGTCAG CTCCCACTGT AGGCAGGCCG CCCCCCCCTT GGGTGTTGAT
GATAAACCCC TTTCATGGTT GAAATTTTAA TTTTCATCTT CAGGCCCTGC CACGAACTGT
GTGGACATTG TGTTTCTTAA TCCTTTGTTT GGATGCCCTG TTGCCTCCCT CACAGTACTC
AGGATTCCAT TTTTGATTCT TGAAACTTGA CTTTCCATTA CATGGTACAT GCTTCAGGAC
CACACGTGAC CCAGAGAGCA AGGGCTGGGC TATAGTCTGA GCAGAGAGGC ACATCTCACC
ACGCGCTGGC TAACAGTGGC TGGCAAACCC AGACCCTGAN AGTGGAAGGT GAAAGGTAAA
CCACACTATG CTCGGGTTTG TATTGAACTT TTTACTCCTC TGGCCAGTTC CCTGGATGCT
CATGCCCCCG AACCTCAAAT AACATTTCCC CGTCCATATG GGTTCCATTC CTTGGAATTT
GGCACCTTGT TTTACCAAAA CGGGCCCTGG GAAAATCATG AAATTTTTAA CCCAAAAAAA
AAAAAAAAAA AAGGCACTGT TCTACTCAGT CGG
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
PRPF4 | PRP4 pre-mRNA processing factor 4 homolog (yeast) | 373 | e-103 | |||
WDR69 | WD repeat domain 69 | 112 | 7e-25 | |||
GNB4 | guanine nucleotide binding protein (G protein), beta polypeptide 4 | 109 | 5e-24 | |||
WDR5 | WD repeat domain 5 | 105 | 5e-23 | |||
WDR5 | WD repeat domain 5 | 105 | 5e-23 | |||
WDR5B | WD repeat domain 5B | 105 | 7e-23 | |||
GNB2 | guanine nucleotide binding protein (G protein), beta polypeptide 2 | 105 | 7e-23 | |||
GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | 105 | 9e-23 | |||
TAF5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa | 101 | 1e-21 | |||
GNB5 | guanine nucleotide binding protein (G protein), beta 5 | 99.8 | 4e-21 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Prpf4 | PRP4 pre-mRNA processing factor 4 homolog (yeast) | 371 | e-103 | |||
Gnb4 | guanine nucleotide binding protein, beta 4 | 107 | 3e-23 | |||
Wdr5 | WD repeat domain 5 | 105 | 6e-23 | |||
Gnb1 | guanine nucleotide binding protein, beta 1 | 105 | 1e-22 | |||
Gnb2 | guanine nucleotide binding protein, beta 2 | 105 | 8e-23 | |||
Wdr5b | WD repeat domain 5B | 104 | 1e-22 | |||
Taf5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor | 101 | 1e-21 | |||
4930563E19Rik | RIKEN cDNA 4930563E19 gene | 100 | 3e-21 | |||
Gnb5 | guanine nucleotide binding protein, beta 5 | 99.4 | 6e-21 | |||
Gnb5 | guanine nucleotide binding protein, beta 5 | 99.4 | 6e-21 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC474807 | similar to PRP4 pre-mRNA processing factor 4 homolog | 373 | e-103 | |||
LOC488087 | similar to guanine nucleotide-binding protein, beta-4 subunit | 109 | 5e-24 | |||
LOC477397 | similar to CG7568-PA | 108 | 1e-23 | |||
LOC479733 | similar to guanine nucleotide-binding protein, beta 2 | 105 | 8e-23 | |||
LOC479733 | similar to guanine nucleotide-binding protein, beta 2 | 105 | 8e-23 | |||
LOC479733 | similar to guanine nucleotide-binding protein, beta 2 | 105 | 8e-23 | |||
LOC479733 | similar to guanine nucleotide-binding protein, beta 2 | 105 | 8e-23 | |||
LOC479733 | similar to guanine nucleotide-binding protein, beta 2 | 105 | 8e-23 | |||
LOC479733 | similar to guanine nucleotide-binding protein, beta 2 | 105 | 8e-23 | |||
GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | 105 | 1e-22 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
MGC129043 | similar to U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD splicing factor Prp4) (hPrp4) | 373 | e-103 | |||
LOC530118 | similar to CG7568-PA | 113 | 2e-25 | |||
LOC525962 | similar to guanine nucleotide-binding protein, beta-4 subunit | 109 | 4e-24 | |||
GNB2 | guanine nucleotide binding protein (G protein),beta polypeptide 2 | 105 | 6e-23 | |||
GNB2 | guanine nucleotide binding protein (G protein),beta polypeptide 2 | 105 | 6e-23 | |||
GNB2 | guanine nucleotide binding protein (G protein),beta polypeptide 2 | 105 | 6e-23 | |||
GNB2 | guanine nucleotide binding protein (G protein),beta polypeptide 2 | 105 | 6e-23 | |||
GNB2 | guanine nucleotide binding protein (G protein),beta polypeptide 2 | 105 | 6e-23 | |||
GNB1 | GNB1 protein | 105 | 8e-23 | |||
LOC516001 | similar to TBP-associated factor 5 | 101 | 9e-22 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
PAFAH1B1 | platelet-activating factor acetylhydrolase Ib-alpha subunit | 94.7 | 3e-21 | |||
GNB2L1 | G-beta like protein | 84.3 | 5e-18 | |||
FZR1 | fizzy/cell division cycle 20 related 1 | 56.2 | 1e-09 |
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