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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-027900

Length: 1,062

Sequence [FASTA format sequence]
AATTNNGGCT AGGAATATGA CXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXX
GACTCT GTGCCCCTCG ACGCGCGTAG GTCCCGGCTG
GCCGGGCGGC GCCCCTGACC TTGGTTTCTC CCCGTGGCAG GTCTGCGCAA GGACCATGGG
TGCGTCGCTG GGCAGCGGCG CGCGGGTGGC TCTCCTGCCC CGCCAGGCCT GCGGCGCCGT
CCGGCGCTGG GCACCCCCCG CGCCCGCCCG AGACTGCCAC TCCAAGACGG GCCTGCCGCG
TCCTGTGCCC CTGAAGAAGC GCGGATACGA TGTCACCAGG AATCCGCATC TCAACAAGGG
TATGGCCTTT ACACTTGAAG AAAGGCTGCA GCTTGGAATC CATGGCCTAA TCCCCCCCTG
CTTCTTGAGC CAGGACGTCC AGCTCCTCCG GATCATGAGA TACTACGAGC GGCAGCAGAG
TGACCTGGAC AAGTACATCA TTCTGATGAC CCTCCAAGAC CGGAACGAGA AGCTCTTCTA
CCGAGTGCTG ACGTCCGACG TGGAGAAATT CATGCCCATC GTGTACACGC CCACCGTGGG
GCTGGCCTGT CAGCACTACG GCCTGACCTT CCGCAGGCCC CGTGGGCTCT TTATCACCAT
TCATGACAAG GGCCATCTTC CAACAATGCT GAACTCTTGG CCAGAAGATG ATATTAAGGT
ACGATCCTAC TTTCTTTGCT GTTCCTCTGT TGTTGGATGA ATCCTTCAGC CTGGACTAGA
GACATTCTCA GCTAAAAATG GGCCATTACA ACACTGAAGG CAAGACACTG CATCCCTTCC
CAAGGCCCAG AGCACAGACC ACTGCCAGCC AAGCACGGAG TAAAGGTTTG CATTAACCAG
GCACCCAGTG AACTTGTCCT TTTATATCAT TATTAATAGT AGTAGTAGTG CATGTATTGA
GTACCTGCTG AATATGCACT GCCAGTTTCC ATAGCAGATG CNGAGGAAGA TCAGATATAG
ACCCTCTTCT CAAGTAGCTG ACTTTTCNTG AGGAAAATAA ATAGAGACCC CCAAGATTAC
TGGTTGAACT GATCAGCACG CAAAAGAGCT GGGGGTGTAA AGGGGCAAAA TACTTTTAGC
TGAGGGAATC TGGNAGACTT CTGGGAATGG TGGATGTGAC CCAGCCTGAA ATGAGGCTAA
AGTTGGAAAT TCACCTTGGA AAAATGAACA AGGGCGGGTT TTTCGCCAAA AAAAAAAAAG
CCAATGGTCT AACGCGGTCC GGGCCCTAAA AACCCCGGGG CCA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial3201e-87O
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial3201e-87O
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic2132e-55O
Contig/Assembly ProteinME2malic enzyme 2, NAD(+)-dependent, mitochondrial1688e-42O
Contig/Assembly ProteinLOC286239similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1019e-22O
Contig/Assembly ProteinLOC286239similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1019e-22O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMe3malic enzyme 3, NADP(+)-dependent, mitochondrial3185e-87O
Contig/Assembly ProteinMod1malic enzyme, supernatant2118e-55O
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1896e-48O
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1896e-48O
Contig/Assembly ProteinMe2malic enzyme 2, NAD(+)-dependent, mitochondrial1696e-42O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial3117e-85O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2417e-64O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2417e-64O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2417e-64O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2417e-64O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2272e-59O
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic1911e-48O
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1663e-41O
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1051e-22O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC525813similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2432e-64O
Contig/Assembly ProteinLOC507817similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1648e-41
Contig/Assembly ProteinLOC540985similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1501e-36O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
MLN010052B03MLN01_0052_B03.bCJ011673