[Help]

[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-028767

Length: 1,124

Sequence:  [FASTA format sequence]
NNNCCTTGTG ACTTGACXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXG TTATGGGAAG TGAGCTGGTG AACCATGATC TGGGAAGGGA
CCTGGGGGAC CTGGGTTAGC TAGTTAGTAG CTCCTAACCC ACTGTGAGGA TATGGATCAT
GAGCTGAGCC AGGGAGCTGC ACTGCTACGG CTGCTACACC TTCTGTGGCT GCTGCCCCAC
TCCTGGACTG CCCCCGAAGC TCCTGCTCCA GGGTGGAGGG ATGAGCTGCA AAACCACACG
TTCCAGTACA CAATGTACTG CCAGGATGGG AATCCCGAAG TGGGACTCTC CGAGGTCTAT
GATGGGGACC AGCTTTTCTC CTTCAACTTT TCCCAGAACA TCCGAGTGCC TCGCCTGCCT
GAATTTGCGG ACTGGGCTCA CCAGATTGAA GACACTCCTG CCATTTTCTT TGACAAAGGA
TTCTGCCGAG AGATGATCGA AAAAGTTGGC CCACTGTTTG AAGGGAAAAT CCCAGTGTCT
AGAGGTCAGG GGTTTTTGGG GGGGGGGATG AGGGGGTGAG TGGGCTTCAC TCTTCACCTG
AATTATACAC TGAATTACTC CCCTTCTCAT CAGCTCCCCA TCTCTCAGGC TTTCTGCTCC
CCCCACCCCA GGACCTTGAT ATTTCTGCCA CTCATGGTTT GCCCTCTATT TTTGTTGTGG
GGCAAAAGAC AAGACCCTAG GAACTTGTCT TCCTCGAAAC TATTTATTGA ACTCGATGAA
TTCAATAGGG ACCCCTGGAT GTCTACCGAG TATCATTAGC CCTTGTGCTA CAACGCTTAG
CAAGATGGGA GGGGAGCATG GAAGTGTCTG AGGATGTGCC TGCGTTTTAA TGGGAAGACA
GCACTGATCC GACACCAAAG TGAGGTCTAG ATAGGAAGTG CGGCAGGAAG TAGCCGGGAG
GAAGACCTTC TCAGAGCCTG CATCATCTCT CCTCCCCAAA GCCCATGCCC TTTGACCCAG
TCTCTGCCCT CCCTTCTGTA TGCTGCGTCC CCTCCACACC GGGATGTCGG CTAAGCTCCT
GGCGTCTTTC CTTCAAACCT AATTCTTTCG AAGGGTACCC ATCGCTGAAG GGTTCAGCTG
AAGCCCCCGG AAGTTGGCCA ACCCAACCCC GGTTCGGTTT GCCAGAAACC TTTTCCCCCG
CCTGACGGGA CCTGGAACAC CCTCTGCCCT GTGGAAGATC GGCCCATTTC TTCCCCCCGG
AGACCCCCTT CAGCCTTTTT TTTAATTCCC GAACCCTTAA TTTTCCGGGG GAACTGAGAC
CAGGCTATAA ATCTTTGGGG AGACCTTTCC GAATAGTTCT GGGGGGCGCA AAACACCGGG
TCTTTTCTCC TTCTCC

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

---

Assembly Overview:      TOP

Change score limit to  

---

BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		HLA-DMA	major histocompatibility complex, class II, DM alpha	171	1e-42	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		H2-DMa	histocompatibility 2, class II, locus DMa	139	5e-33	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		HLA-DMA	major histocompatibility complex, class II, DM alpha	179	4e-45	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		BOLA-DMA	major histocompatibility complex, class II, DM alpha-chain, expressed	187	1e-47	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		SLA-DMA	SLA-DM alpha chain	241	2e-65	O