[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-030108
Length:
951
Sequence:
[FASTA format sequence]
GGCCXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXTT GGCCTACTGG AAGGAAGAGA TGCTGAGACT
GCCCGGAACC GCAGCGGAGG AAATTTGGTC CTGAAACCCC CTCTTAATCC CGACTGCTGG
GCCCAAGAAC TTGGACATCC TTACGTGCAG TTTGCTCACC CTCTGGCTGT GCCATGGGCC
CAGGATTAAA AAAAAAAAAA AAAAAAAAAA GGAATCCTGG TTGAGTAGAG CCCCATGAGA
GACACGGGAT AACCAGCTGA CTGCATTCCA GGATCTGTGC GCGGCAGAGG ACCACGGCTG
CGAGCAACTC TGCGTGAACC TGCTGGGCTC CTTTGTGTGC CAGTGCTACG GGGGCTACAC
CCTGGCGGAG GACGGGAAAC GGTGCGTGGC TGTGGACTAC TGTGCCTCAG AAAACCACGG
ATGCGAACAC GAGTGTGTAA ATGCTGACAC CTCCTACGTC TGCCGGTGCC CTAAAGGATT
TGCTCTGAAC CCAGATAAGA AAACATGTGC AAAAATAGAC CACTGCGCGT CACCTAACCA
CGGCTGCCAG CACGAGTGTG TCAACACAGA TGATTCCTAC TTCTGCCGCT GCCTAAAAGG
CTTTACTCTG AATCCAGATC AGAAAACCTG TAGAAGGATC AATTACTGTG CGCTGAACAA
ACCAGGCTGT GAGCACGAAT GCATCAACAC GGAGGAGGGC CACTACTGCC GCTGTCGCCG
GGGCTACACG CTGGACCCCA ACGGCAAGAC CTGCAGCCGG GTGGATCACT GCGCGGAGCA
AGACCACGGC TGCGAGCAGC TGTGTCTGAA CACCGAGGAC TCCTTCGTGT GCCAGTGCTC
GGAAGGCTTC CTCATCAACG AGGACCTCAA GACCTGCTCC CCGGGTGGAT TACTGCCTGC
TGAGCGACCA CCGGTTGCGA ATACTCCTGC GTCAACACGG ACAGATCCTT CGCCTGCCAG
TGTCCTGAGG GGGATGTGCT CCCCAGTGGA TGCAAGACCT GGTGCCAATT TGAATTCTTG
GGGGTTTGGG GGAACCATGG GTTGTGAAAC ATTCCTTGGG GTAAACAGGG GGGAAGCTTC
TTTTCTGGGG GCCGAATGTT TTTAAAAGGG TATATAACCT CCCGGGAAAA AAAGGGGGAA
AAAACCTGGG CAAAAAAAAT AAGGTTTTTT TTTTTTGGGG TTTTTGAA
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
MATN2 | matrilin 2 | 421 | e-127 | |||
MATN2 | matrilin 2 | 421 | e-127 | |||
MATN3 | matrilin 3 | 172 | 3e-43 | |||
MEGF6 | multiple EGF-like-domains 6 | 166 | 2e-41 | |||
MEGF6 | multiple EGF-like-domains 6 | 166 | 2e-41 | |||
MEGF6 | multiple EGF-like-domains 6 | 166 | 2e-41 | |||
SCUBE3 | signal peptide, CUB domain, EGF-like 3 | 163 | 2e-42 | O | ||
FBN2 | fibrillin 2 (congenital contractural arachnodactyly) | 161 | 9e-40 | |||
FBN3 | fibrillin 3 | 156 | 2e-38 | |||
SCUBE1 | signal peptide, CUB domain, EGF-like 1 | 154 | 1e-37 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Matn2 | matrilin 2 | 417 | e-125 | |||
Matn4 | matrilin 4 | 184 | 1e-46 | |||
6130401L20Rik | RIKEN cDNA 6130401L20 gene | 175 | 7e-44 | |||
6130401L20Rik | RIKEN cDNA 6130401L20 gene | 175 | 7e-44 | |||
Megf6 | multiple EGF-like-domains 6 | 175 | 5e-45 | |||
6130401L20Rik | RIKEN cDNA 6130401L20 gene | 175 | 7e-44 | |||
Megf6 | multiple EGF-like-domains 6 | 175 | 5e-45 | |||
6130401L20Rik | RIKEN cDNA 6130401L20 gene | 175 | 7e-44 | |||
6130401L20Rik | RIKEN cDNA 6130401L20 gene | 175 | 7e-44 | |||
Megf6 | multiple EGF-like-domains 6 | 174 | 8e-45 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC491431 | similar to matrilin 2 isoform a precursor | 426 | e-127 | |||
LOC485891 | similar to Matrilin-4 precursor | 174 | 9e-44 | |||
LOC482985 | similar to matrilin 3 precursor | 171 | 7e-43 | |||
LOC489619 | similar to EGF-like-domain, multiple 3 | 169 | 5e-42 | |||
LOC485382 | similar to CEGP1 protein | 164 | 1e-40 | |||
LOC485382 | similar to CEGP1 protein | 164 | 1e-40 | |||
LOC481491 | similar to fibrillin 2 precursor | 160 | 1e-40 | |||
LOC485382 | similar to CEGP1 protein | 158 | 8e-39 | |||
LOC481753 | similar to signal peptide, CUB domain, EGF-like 3 | 158 | 6e-41 | O | ||
LOC485006 | similar to Fibrillin-3 precursor | 155 | 7e-38 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC540041 | similar to matrilin 3 precursor | 175 | 4e-44 | |||
LOC514874 | similar to signal peptide, CUB domain, EGF-like 3 | 163 | 1e-42 | |||
LOC540017 | similar to fibrillin 2 precursor | 162 | 2e-41 | |||
LOC616459 | similar to EGF-like-domain, multiple 3 | 161 | 8e-40 | |||
FBN1 | fibrillin 1 | 152 | 2e-37 | |||
LOC529947 | similar to CEGP1 protein | 150 | 1e-36 | |||
FBLN5 | fibulin 5 | 149 | 3e-36 | |||
LOC514588 | similar to fibulin 1 isoform C precursor | 147 | 9e-36 | |||
LOC519259 | similar to fibrillin 2 precursor | 143 | 2e-35 | |||
LOC514588 | similar to fibulin 1 isoform C precursor | 139 | 4e-33 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
FBN1 | fibrillin 1 | 143 | 6e-37 | |||
EGF | epidermal growth factor | 122 | 1e-29 | |||
CD97 | CD97 antigen | 62.8 | 1e-11 | O |
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