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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-032299

Length: 1,109

Sequence [FASTA format sequence]
NNNGGCTAGT XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX X
TCTCTGCTC CTCACCGTTC GAGCCACAGC CCTGTGTTCC
TTGCATTGCC GGCCGAGTCC CTGAGACAAG ATGGTGAAGG TCGGAGTGAA CGAATTTGGC
CGCATCGAGC GCCTGGTCAC CAGCGCTGCT TTTAACTCTG GCAAAGTGGA CATTGTCACC
TTCAATGACC CCATCATTGA CCACCAGTAC ATGGTCTACG TGTTTCAGTA TGATTCCATC
CCACGGCAAG TTCCTCGGCA CATTCAAGGC AGATAACGAG AACCTTGTCA TCAATGGAAA
CGTCATCACC ATCTTCCAGG AACGAGATCC CGACGACATC AAATGGGGCC ATGCTGGTGC
TACATATCTT GTGGAGTCCA CAGATGTCTT CACGACCATG GAGAAGGCCC GGGCTCACTT
GAAGCCTGGG GCCGAGACGG TCGTCATCTC TACCCCTTCT GCCGATGCCC CCATGTTTGT
GATGGGCGTG AGCCCTGAGA AGTATGACAA CTCCCCTCCA GATCGTCAGC AATGCCTCCT
GCATCACCAA CTGCTTGGTA CTCCTGGCCC AAGTCATCCA TGACCACTTC AGCGTCGCGG
AGGGACTCCT GACCACGGTC CGTGACATCA CTGCCACCCA AAATACTGTC GATGGCCCGT
CTGGTAAACT TTGGCGTGAT GGCCCAAAGG CTTGCCATAG AATTCACCCT GCTTCTACCG
GCCCCTGCCT AGGCTGTGGA CAAGGTCATA CCTGAACTCA AACGGGAAGC TCACTTGGCA
AGCCCCTTCC GGGTCCCCAT CCCCAAACCT GTCCTGTTGT TGGAACCTAA CCCTCCCCCC
CGGGAAAAAA CCTGCCAAAA TCATTATTGA CCTTCCAGAA ATGGGGGGTT TAACCAAAGG
CCTCCCGAAG GGCCCCCCCC CCTGGGGGCA CTCCCCGGGG CCTAAAATCG GGAGGGACCC
CAGGCTTTGT GACCCCTTGT GAGCTTTCAG CAAGGGGGAA AACATTTTCC TCTCTTTTTA
TAACATTTGT AAAGGCCTCG GGGCGCTCGG GAATTATTGA CCCTCCCACA ACAAAGCAAA
ACTTTTCTGT TCTAAGAGAT CACATTTTTC TTTGTGGGAG ACACCCACAA A


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGAPDHglyceraldehyde-3-phosphate dehydrogenase1422e-75O
Contig/Assembly ProteinGAPDHSglyceraldehyde-3-phosphate dehydrogenase, spermatogenic92.48e-50


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGapdhglyceraldehyde-3-phosphate dehydrogenase1426e-74O
Contig/Assembly ProteinLOC667048similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1421e-73O
Contig/Assembly ProteinLOC670723similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1421e-73O
Contig/Assembly ProteinLOC14433similar to glyceraldehyde-3-phosphate dehydrogenase1426e-74O
Contig/Assembly ProteinLOC380687similar to glyceraldehyde-3-phosphate dehydrogenase1426e-74O
Contig/Assembly ProteinLOC632720similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1401e-72O
Contig/Assembly ProteinLOC545984similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1409e-75O
Contig/Assembly ProteinLOC432919similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1393e-71O
Contig/Assembly ProteinLOC630967similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1393e-71O
Contig/Assembly ProteinLOC630967similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1393e-71O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGAPDHglyceraldehyde-3-phosphate dehydrogenase1395e-76O
Contig/Assembly ProteinLOC610683similar to glyceraldehyde-3-phosphate dehydrogenase1372e-73O
Contig/Assembly ProteinLOC477441similar to glyceraldehyde-3-phosphate dehydrogenase1372e-72O
Contig/Assembly ProteinLOC607085similar to glyceraldehyde-3-phosphate dehydrogenase1344e-70O
Contig/Assembly ProteinLOC610211similar to glyceraldehyde-3-phosphate dehydrogenase1342e-72O
Contig/Assembly ProteinLOC491880similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1304e-70O
Contig/Assembly ProteinLOC610338similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)1291e-68O
Contig/Assembly ProteinLOC487478similar to glyceraldehyde-3-phosphate dehydrogenase1282e-68O
Contig/Assembly ProteinLOC480206similar to glyceraldehyde-3-phosphate dehydrogenase1273e-69O
Contig/Assembly ProteinLOC475187similar to Glyceraldehyde-3-phosphate dehydrogenase, liver (GAPDH)1245e-69O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGAPDglyceraldehyde-3-phosphate dehydrogenase1394e-76O
Contig/Assembly ProteinPTPRNprotein tyrosine phosphatase, receptor type, N1352e-48O
Contig/Assembly ProteinLOC617654similar to Glyceraldehyde-3-phosphate dehydrogenase, liver (GAPDH)1342e-64O
Contig/Assembly ProteinLOC514503similar to glyceraldehyde-3-phosphate dehydrogenase95.91e-36O
Contig/Assembly ProteinGAPDHSglyceraldehyde-3-phosphate dehydrogenase, spermatogenic92.48e-50
Contig/Assembly ProteinLOC615002similar to Glyceraldehyde-3-phosphate dehydrogenase, liver (GAPDH)91.32e-52O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
OVR010098H01OVR01_0098_H01.b