[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-041266
Length:
731
Sequence:
[FASTA format sequence]
NNNNAATXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXGCAT
TCTCTTTGCT TGTATTGCTG TCCATCCTGA CCCACCATAG CTCTACCGAC CCTCATCGAG
GCATCTAAGG AGAAAATGAC CATACTTGGG GTCCCAGTCC TGGGATTTGT TATCACCATC
TTGAACCTTC AGAAATCATG GGCTATCGTA GAGAATCACG TGATCATCCA GGCTGAGTTC
TATCTGAGCC CTGACAAATC TGGCGAGTTT ATGTTTGACT TTTGACGTGA TGAGATTTTC
CACGTGNATA TGGAAAAGAG GNNAGACGTC TGGCGACTTT GAGAATTTGG ACATTTTGCC
AGCTTTGAGG CTCAGGNTGC ACTGGCCCAC CTAACCTGTT GACAAGAGCC AACTGAAAAT
CATGATTAAN CGCTTCCAAA AAACCCCCAA AACCAAAGGT ACTCCCAAAT TGACTGGGCC
TTCTAAAAAA CCTGGTTGAC TGGGGAAAAC CCCAAATCCC CACCTGGTTT CTCTCACAAA
TTTTTCCCCC CCACGGGGGA AAGTGACCCC GGGTTTTAAA AGGGGCCCCC GGTTACCCAA
GAAAGTGTTA AAAAAATTTT TTCTTGCCCC CGGAGAGAAA CCTTTTTCCC AGGATTCCCA
AAATCCCCCT CTTTGGCCCC CCCCAAGAAG TTTTTTAAAT TCCCCGGGGG AACCTGGGGG
TTTTGCACAA CCCTCTTTCT AACCCCGGGG GGTTTGAAAA TAAAACCCCC CCCCCAAAAA
AAAAAAAAAA ACCCTGGGTG CTCTCGCCCC AAATTTGGCC TCTGGGGGGA AATTTCCTGG
GACACTCCTT TTTAAAAAGG GGGGGGGAAA GGAAACCCCC CTAAAACCCG AGGGCCTTTT
TGGGGGTTTT CGGGAAGAAA TTTTTTTAAA AAAATAAGGA ATATTCTCCT TAAAAATTTT
TAAAAACCGA GGATTCCCGG TTGTCACCTC GAGAGAACAC TCTCTCGGCA TTTCAGCCTG
AAGCATCAAG TGTGATGCTT CTTATCTCAA ATTACATCGG GTATCCTGTT GTACCCCTCT
GGCTGCTTTC TCCCTTCCAG CTTTTATACC CGGTATGCCT TGAAAAATCC TAGATCTTCC
TGCTGAACCT TCAGTTTTGG GCTCTTGTAC TTTCTGGATT TCCCCGGTTG GTTTCGAAAC
AATTGGGGCT CGGGAAAAAA AAAGCCCGG
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
HLA-DRA | major histocompatibility complex, class II, DR alpha | 120 | 1e-27 | O | ||
HLA-DPA1 | major histocompatibility complex, class II, DP alpha 1 | 63.2 | 2e-10 | O | ||
HLA-DOA | major histocompatibility complex, class II, DO alpha | 53.1 | 2e-07 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
H2-Ea | histocompatibility 2, class II antigen E alpha | 106 | 2e-23 | O | ||
H2-Aa | histocompatibility 2, class II antigen A, alpha | 51.2 | 1e-06 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
DLA-DRA1 | MHC class II DR alpha chain | 121 | 6e-28 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
BOLA-DRA | major histocompatibility complex, class II, DR alpha | 122 | 4e-28 | O | ||
LOC525727 | similar to HLA class II histocompatibility antigen, DO alpha chain precursor (MHC class II antigen DOA) (MHC DZ alpha) (MHC DN-alpha) | 61.6 | 6e-10 | O | ||
LOC525727 | similar to HLA class II histocompatibility antigen, DO alpha chain precursor (MHC class II antigen DOA) (MHC DZ alpha) (MHC DN-alpha) | 61.6 | 6e-10 | O |
Locus | Definition | Score | E value | FL |
---|
|