[Help]

[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-042241

Length: 971

Sequence [FASTA format sequence]
NNAATGXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXGTCTT
CTCAGCTCCT CTCCTCACTA CGCGGATTTA CTGGTGGCCT CCCCGGTATC CAGCCGACCC
GGCCGGGTGG ACCCTTAGCT GGCGCCGGCT CCGGGAAGCC TAGAGAAGGG GAGGGGCGGA
CTCAGCTGGA GCTGAGCATC GTCCGGGTGG GCTGAGAGGC CGTGGCCTCT CCGTTCGAAG
CACCACCTGT CGCGGGGCGA GACTTGTGGT GAGAGAAATG ATGTTGTCCA GATTTAAAAT
AGTTGCCACT CCTTGTACTC TAGCATGTCG TCATTTGCAC ATAAAAGAGA AAGGCAAGCC
ACTTATGTTG AACCCAAGAA CAAACAAGGG AATGGCATTT ACATTACAGG AACGACAAAT
GCTGGGTCTT CAAGGACTTC TCCCTCCCAA AATAGAGACA CAAGATATTC AAGCTTTACG
ATTCCATAGA AACGTGAAAA AGCTGAATGG CCCTTTGGAA AAATACATCT ATATAATGGG
AATTCAAGAA AGAAATGAGA AGTTGTTTTA TAGAATACTG CAAGATGATA TTGAAACTCT
AATGCCAATT GTATATACAC CAACAGTTGG TCTTGCCTGT TCCCAGTATG GACACATCTT
TAGAAGACCC AAGCTGTTGT GGTGACTGAT GGAGAGAGAA TTCTGGGTCT TGGAGATCTG
GGTGTCTATG GAATGGGAAT TCCAGTANGA AAACTATGTT TGTATACAGC TTGTGCAGGA
ATACGGCCTG ATAGATGTCT GCCTGTGTGT ATTGATGTAG GAACCCGATA TCCAGCACTC
TTAAAAGACC CATTTTACAT GGGCTTATAT CAGAAAAGAG ATCGATCACA GCGTTATGAT
GATCCTATTG ATGAATTTAT GAAGGCCATT ACTGACAGAT ATGGGACGAA CATACTAATT
CCTTTTGAGA CCTTGGAATC ATAATGCATT CGGTTCTTGA AAAATTACCA GAAAATTTTG
TACTTCATGA CGATATCAAG GACCCCTTGC ATNCTCTACT GGTCTGCTGC ACCCAAAATT
ATGGTAATCC TTCCAACCCA AATCTTTTTC TGAACGGGAA AGCTGCCCTG AATGCAATCT
AAATTTTGCT TGGGAGAATG GCCCCCGAAA AAACTCAAAA AATTGATGGG TAAGTTGGTA
TTTTAGGGCG GAACTAATAA CATCTGGAAC TTGTTCCCCC CCCAAAATTC TGAATTTAAA
GGCAAAAATC AACCTCCCAA GGGAGTTAAA TTCTTTTCTG TTGCGGAAAT CTGGGTATAA
AGAAAAATCC CTTCCGGGGA TTGAAATTTT TTTATTGGCC CCGGGCGCGT GGTTCTCTGG
TCCTGTTAAG ACGTTGATTA AGAAGGGGCG CTCTT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinME2malic enzyme 2, NAD(+)-dependent, mitochondrial254e-117O
Contig/Assembly ProteinLOC286239similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1644e-64O
Contig/Assembly ProteinLOC286239similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1644e-64O
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial1401e-67O
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial1401e-67O
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic1372e-67O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMe2malic enzyme 2, NAD(+)-dependent, mitochondrial245e-113O
Contig/Assembly ProteinMe3malic enzyme 3, NADP(+)-dependent, mitochondrial1432e-67O
Contig/Assembly ProteinMod1malic enzyme, supernatant1311e-63O
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1317e-60O
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1317e-60O
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)98.69e-21O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)256e-120O
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1935e-72O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial1428e-64O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial1421e-68O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial1428e-64O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial1428e-64O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial1428e-64O
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic1421e-62
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial1425e-34O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC507817similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)271e-124O
Contig/Assembly ProteinLOC525813similar to malic enzyme 3, NADP(+)-dependent, mitochondrial1442e-63O
Contig/Assembly ProteinLOC540985similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1201e-27O
Contig/Assembly ProteinLOC518268similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)85.56e-17O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
PBL010050E10PBL01_0050_E10.bBW971060 AK348878