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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-046491

Length: 1,173

Sequence [FASTA format sequence]
NNNTTTTCGC GTTGGCTAGG GATTCANGTT CTGCAAGTTG GCTTCTGATT TTGAAGGCTT
TCTGATCTAT CAGGAGACAC CTTTTTGTTT GCTTGACATC ATCTTTCCCT TATTGAAAAA
GTGACCTTTC CCCAAGCACT TGGTTTCTGT TGTTGACCCT GTAAGGTATT TCCTTGATGA
GTTCTGTTTG GATACCCCAT CACCTGGCTT GTCTCCCACC CGACTGACAT TTTCAAGTAA
ATAATCAAAT TGCTATACTT TCCTCCCATC ATCCGGTTCC TGAATGAAGG GGCTGGGGGT
GGGGAGGGCA CCTCAGGTTG TGCTTAGTTC GCAGGACATT CACCGGTTAC ATGGTGCACA
TGCCCCAGAG TTGACCAAAA AGGTTCAGCG ACATGCGTCC AGCAGCTCTT TCCCATCTGG
CGGTAGCGAG CACCTGAAAG AAGACCTCAG CCTTCGCCTG AAGAAGCTGA CCCACGCTGC
CCCCTGCATG CTGTTCATGA AGGGAACACC CCAGGAGCCG CGCTGCGGTT TCAGCAAGCA
AATGGTGGAA GTTCTTAACA AACATAATAT CCAGTTTAGC AGTTTTGATA TCTTCTCAGA
TGAAGAAGTT CGCCAAGGCC TCAAAACCTA TTCCAATTGG CCCACCTACC CCCAGCTCTA
TGTTTCTGGA GAGCTCATAC GAGGACTTGA TATAATCAAG GAGCTAGAAG CATCTAAAGA
ACTAGATACA ATTTGCCCCA CAGCTCCCAA ATTAGAGGAA AGGCTCAAAG TACTGACAAA
TAAAGCTTCT GTGATGCTCT ATATGAAGGG AAACAAACAG GAAGCCAAGT GTGGTTTCAG
CAGACAAATC CTGCAAATTC TAAATAGTAC TGGTGTCGAC TACGAGACGT TCGACATACT
GGAGGATGAG GTAGTCCGGC AGGGGGTTGA AACCTACTCC AACTGGCCGA CGTACCCTCA
GCTGTATGTG AAAGGTGAGC TGGGTCGAGG CCTGAATATT GTTAAGGACT AAAAGAAAAC
GGTGAGCTGC TGCCTATCCT GAAAGACAAA ATAATCATTG GGGGACTGGG GGCTAGCTAC
TGCCAGAAGC CCGTCCTCCC TTAAAGACCA GTCCCTGAGT TGCCAAGGAT AAGAAAAGCT
TATCCCCGGT ACCCGGGGGA TTTTCCGAGA CTGCCCTAAA AACCGTAAAA CAGGGGTTCC
CCCC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTXNL2thioredoxin-like 2395e-110O
Contig/Assembly ProteinGLRX5glutaredoxin 5 homolog (S. cerevisiae)90.52e-18O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTxnl2thioredoxin-like 2396e-110O
Contig/Assembly ProteinLOC620016similar to thioredoxin-like 21703e-42
Contig/Assembly ProteinLOC620016similar to thioredoxin-like 21703e-42
Contig/Assembly ProteinLOC620016similar to thioredoxin-like 21703e-42
Contig/Assembly ProteinGlrx5glutaredoxin 5 homolog (S. cerevisiae)90.53e-18O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC477869similar to Thioredoxin-like 2 protein (PKC-interacting cousin of thioredoxin) (PKCq-interacting protein) (PKC-theta-interacting protein)397e-110O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTXNL2thioredoxin-like400e-112O
Contig/Assembly ProteinLOC616291similar to Thioredoxin-like protein 2 (PKC-interacting cousin of thioredoxin) (PKC-theta-interacting protein) (PKCq-interacting protein) (HUSSY-22)1986e-51O
Contig/Assembly ProteinLOC505935similar to CG14407-PA89.45e-18O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
SKNB10055D01SKNB1_0055_D01.b