[Help]

[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-048550

Length: 1,120

Sequence [FASTA format sequence]
NNAAACAAAN NNNNNACTCT TGCGTTGGCT CTGGTGGCTG GAAAAGAAGG TGTCCAAAAG
AGAAAGCCAT AAAGAAGATA TGGTTGGTTG ACTCAAAAGG ATTAATAGTT AAGGGACGGG
CTGCCTTAAC AAACGAGAAA GAGGAATTTG CCCATGAACA TGAAGAAATG AAGAACCTAG
AAGCCATTGT TCAAGATATA AAACCAACAG CCCTCATAGG AGTTGCTGCG ATTGGTGGTG
CATTTTCAGA ACAAATTCTC AAAGACATGG CTGCCTTCAA TGAACGGCCT ATTATTTTTG
CTTTGAGTAA TCCAACCAGC AAAGCAGAAT GTACTGCAGA GCAGTGCTAC ACACTGACAC
AGGGTCGTGC AATTTTTGCC AGTGGCAGTC CTTTTGATCC GGTCACTCTT CCAAGTGGGC
AGACCCTGTA TCCTGGCCAA GGCAACAATT CCTATGTGTT TCCTGGGGTT GCCCTTGGTG
TTGTGGCCTG TGGACTGAGG CATATCACGG ATAAGATCTT TCTCACTACT GCTGAGGTTA
TAGCTCAGCA AGTATCAGAT AAACACTTGG AAGAAGGCCG GCTTTATCCT CCTCTGAACA
CCATTAGAGA TGTTTCTCTG AAAATCGCAG AAAAGATTGT GAGAGATGCA TACCAAGAAA
AGACAGCCAC CATTTATCCT GAACCCTCAA ACAAGGAAGC ATTTGTCCGC TCTCAGATGT
ATAGCACTGA TTATGACCAG ATTCTACCTG ATGGCTATTC TTGGCCTGAA GAGGCCCAGA
AAATACAGAC CAAACTTGAC TAATAGCGTA ATAGCCTACA TTTCTAACTC CATTCATGAN
NATCTGGAAG TCTTTCATAA TTTTTAAATA TTGTGATCTT TTATAATGAT TCATAATGTG
CTAGATTAAG ATAATTTCCC CTTAACACTC TAAACATTTA TGGACGATTA TTGTTATACT
TTAGGGTAAA CATCACAGTA GACCATTTTG CCTCTTTACT TNCTGTTATT TANGGTTCCG
GCCTAATATT TTGCCCAGTT CTCTTTAAAA GCTATTGTAC TGCTACTGAA AACCTTTTTC
TANAGGACCC AAGGGGAAAC CCAATANTAT AAAAGGGTTG ATCCCTAAAA AAAAAAAAAA
AAGGCCCTGT GTCAACTTCA GGTCCGCCCC TAAAAATTAA AAAAAACTCC CCCTCCCCCG
AACCAAAAAA GAAAAGAAGT TTGTTTACTG TTTTGCCTCT AAGGGCAAAA AAAAACCCCC
ATTCCAAAAC TTTCCCCTCT CTTGGTTGCA ACCCCGATCA T


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic444e-125
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial3262e-89
Contig/Assembly ProteinME3malic enzyme 3, NADP(+)-dependent, mitochondrial3262e-89
Contig/Assembly ProteinME2malic enzyme 2, NAD(+)-dependent, mitochondrial2463e-65


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)411e-115
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)411e-115
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)411e-115
Contig/Assembly ProteinMod1malic enzyme, supernatant402e-112
Contig/Assembly ProteinLOC677317similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)389e-108
Contig/Assembly ProteinMe3malic enzyme 3, NADP(+)-dependent, mitochondrial3263e-89
Contig/Assembly ProteinMe2malic enzyme 2, NAD(+)-dependent, mitochondrial2402e-63
Contig/Assembly ProteinLOC639819similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)1173e-26O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinME1malic enzyme 1, NADP(+)-dependent, cytosolic442e-124
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial3286e-90
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial3286e-90
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial3117e-85
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial3088e-84
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2986e-81O
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2564e-68
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)2511e-66
Contig/Assembly ProteinLOC476198similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)2511e-66
Contig/Assembly ProteinLOC485151similar to malic enzyme 3, NADP(+)-dependent, mitochondrial59.37e-09


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC540985similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)444e-125
Contig/Assembly ProteinLOC525813similar to malic enzyme 3, NADP(+)-dependent, mitochondrial2394e-63
Contig/Assembly ProteinLOC617730similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)1655e-41O
Contig/Assembly ProteinLOC507817similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2)95.95e-20


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
SKNB10100E01SKNB1_0100_E01.bDB806030