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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-051792

Length: 982

Sequence [FASTA format sequence]
GGGGNCCTAG GACTTGACAG TTTGTACXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXX
CAG GCCGCAGCTG CGAGCCTTGG CTGGGCAGGA AAGCCCGCCG
GACCGCTGGG GTTGGAGCTA CCGCTGCGGT GATGGCGCAT GAAGGCTCGA GGCAGGAGAG
GCAGGCACGA GACCGCGGGA TGACTCGATC CAAGGCGGAA AAGGTCCGGC CGCCAACAGT
TCCGGTGCCA CAGGTGGACA TCGTGCCTGG GCGGCTTACT GAGGCCGAGT GGATGGCGCT
CTCGGTTCTT GAAGAGGGCG AGGAAGTGGT GGGGGACATC TTGGCTGATC TGCTGGCCCG
AGTCATGGAC TCCGCCTTCA AAGTCTACCT GACCCAGCAG TCAGGCACGG GAGGCCATGC
TGCAGATCAC CGAGTGGCGC TTCCTGGCCC GGGACGAGGG AGAAACTGCA GTGGCAGAGG
ACCCTACGTG GGGAGAGGAC GAAGAACCTT CCGCTTGCAC GACGGACGCC TGGGCTCAGG
GATCCGTGCC CGTGCTGCAC GCGCCCACCT CGGTGGGGCT GGAGGAGACC TTCCCAGGCG
AAGACCGAGG GAGCGTGGAT CAGATCACTT TAGGAAGATC GTGGATGGAT ACAGGCTCTC
AGGAACCGAT GGAACCTTGG GACCGCTGTC TTCCAGAGCA GAGGGTCGTC CCAGGTCCCT
CATCCACCCT GGAGCTGCTT AAGGAGACAG GGCCTCGAGG TCCTTTAGAG GAATTGGAAC
TGGACGGCCA GGCGAGGGGC CACCTCTCCT CGGTCGGATG CTTGACCGTG AGCAGCCAAC
TGTCGATGGA GATGGCGGTC GCAGGCGGTC CTCACCTTTC TCTGGAGCCG AACCCGGTTG
CCAGCCCCAA GGGCTCGGTC GAGAAGGCAC AGCCCTTCAG CTCCCCGTTC TCTCTCGAGG
ACCTCTACTA TTGCACGCCC CAGGCTCAGG CGGCTGGAGA CAGGATGGAG CCCCAGAAGG
AAGAAGTGCC CCTCATCTCC TCGAGCGGTT CGGTGTCTGG AAACTCTGCT GGTGGGCCCA
GCACGCTCAG CTCCTCTTCT GTTTCCAGCC GCAACAACCC TGGGGCCCCA TTGCCGGCCA
GTCTACTCCC GGGAAATTTG GCCCCACCCG AAAATGAACG CCTGAACCCG CGCGGCGTCT
TTCCCCTGGG TGCCCCCCCG GCGGAGGTTG GGTCCCAACC TCCAATGCCC CCCAAAACTA
CCCGGGGGCC GTCNAACGGA AAACGAGACC CGGGGGTCAA AACCCCGGCC ACAATCCGCT
TCCCAAAAAT TTCCCTCCCG CGGGTTTCTT CAATGTGTCC GGCGAGAATA ATCTCTT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC388963similar to short-chain dehydrogenase/reductase 12382e-94
Contig/Assembly ProteinLOC388963similar to short-chain dehydrogenase/reductase 12382e-94O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly Protein1700003E16RikRIKEN cDNA 1700003E16 gene1882e-75O
Contig/Assembly Protein1700003E16RikRIKEN cDNA 1700003E16 gene1794e-45O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475790similar to Retinol dehydrogenase 121352e-65O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
TCH010008E07TCH01_0008_E07.bCJ023048 AK350671