[Help]

[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-054547

Length: 1,182

Sequence [FASTA format sequence]
NTTTTCCATT GTACTATGAC XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXX
AGCT TGTCCTCCGG TCGCGTTGCC ACCACAGCGG CCGCTGCCGG
GCGCGGTTAC GGCGGGTCGG TTGGTGTGTC TTTCAGTGTC GATTTCTGTG CAGTTGAACG
CCTGCCATGG CTGATTTAGA TCCGTTCGGC GCCCCCGCCG GCCCCTCGCT GGGGAACGGA
GTGGCCGGCG AGGAGGACCC GGCCGCGGCC TTCTTGGCGC AGCAGGAGAG CGAGATTGCT
GGCATCGAGA ACGACGAGGC CTTCGCCATC CTGGACGGAG GCGCTCCTGG GCCCCAGCCG
CACGGCGAGC CGCCGGGGGG TCCGGATGCC GTTGATGGAG TGATGAATGG CGAATACTAC
CAGGATAGTA ATGGGCCGAC AGACAGTTAT GCATCTATTT CACAAATGGA TCGATTGCAG
TCAGAACCTG AAAGTATCCG TAAATGGAGA GAATAGCAAA CGGAACGCTT GAAAGCCCTT
GATACCAATT CTCGGAAGCA GGAATCAGAG TGGAAAGAAA AAGCAATAAA GGAGCTGGAA
TATTGGTATG CAAGGCAGGA CTATCAGTTA CAAAATACAA ATGCCTAAAA AAAGGCCCCC
AAAGAACCCT TTGAAAATTA AATTAAATAG TCATCCCCAA TAAAGGAATG GTAACAGGTG
TAAAGAGAGT TTAAATTGTG AAACAAATAA AGAAAATTAA TCTCAAAATT CCACACAAAA
AAAGAAATGT ACTAAACACG GAAATAAAAG AACCACTTAG GAAAAAAAAA AACCGAGTTC
TGAAATCAAT ATAAGTAACA ATCCAGAAAT AAAAAATAAT GAAGANANTT CAAAAAAATA
GAAATAATTA TCTTTCATCT ACAATGGAAA AAAACTTATT ATGAAAATAA AGATTAATTA
AGAATAAAAA ATAAAAAAGA TCTCATAAAC TGAATTTTCA CAAGAAATAT ATATATATAC
CATATAAAAC TAAATAATTA AGAGAATTTA ACAATTATAC AAATATCGTA CAAAGACAAA
CTTATAATAT CAAATCATAA CTTTACATGA AAGAGAAACA GAGGTACAAA ATATCAAAGA
ACATTACTAA AGCTATTATT GAAAATAATA AATATACAGA GTACTAAACA AGANTACCAA
ATAAAAATAA TACGNTAAGA TAACAAACAT AAAAAAAAAA AATAATTATA TACAATAAAT
ACATATT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)2463e-65O
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)2332e-61O
Contig/Assembly ProteinCLTBclathrin, light polypeptide (Lcb)1441e-34O
Contig/Assembly ProteinCLTBclathrin, light polypeptide (Lcb)1357e-32O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCltaclathrin, light polypeptide (Lca)2311e-60O
Contig/Assembly ProteinCltbclathrin, light polypeptide (Lcb)1411e-33O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a2486e-66O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a2393e-63O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a2371e-62O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a2364e-62O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1456e-35O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a1441e-34O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a1441e-34O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a1442e-34O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a1402e-33O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a1358e-32O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)2362e-62O
Contig/Assembly ProteinCLTLBclathrin, light polypeptide B (light chain B)1489e-36O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
TCH010069C10TCH01_0069_C10.bCJ027368