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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-056548

Length: 1,304

Sequence [FASTA format sequence]
NNTTACTACT GTGGCTATAA NATTTGTGCC GGCGCCCCGG GGAGGACAGG CTCCAGAGAC
GCGCCGGCAT TTGGCCTCCA ACTGGTGCCC CCATGGGCAG CCCCTCCTTT TTCTCGCGGC
GGCTGCCGCC GCTGTGGCTA CTGCTGCTGT CGCCGTGGCC AGTCTGGACC CAGGCGCTCC
CAGCAGCCAC CCCCTCCGGA CCCCCGGGCG CCCCGGACTG CCCGGAGGCG TGCGTGTGCG
CGCCGGGCGG TCAGGCCAAC TGCTCCTGGC GCGCGCTGCC CGCCGTGCCG GGGGGCCTGA
GAAAGAGCGT GCGAATTCTG CTGCTGGACC ACAACCGCGT GCGGGCGCTG CCTCCCGGCG
CCTTCTTGGG CGCTGGCGCG CTGCTACGTC TGGACCTGCA CGAGAACCGG CTGCGCTGGA
TGCACTCATG GGCCTTCTGG GGGCTGGGCA CTCTGCAACA CCTCTACCTC AGCGCCAACC
AACTGGAGGT GCTGGTGCCC AGCACCTGCG TGCCACAGCA GTGCGCTGCG CTACCTCTCG
CTGGCATTGT AAACAGCAGG TTCGCCAGTA AAACAGATTC CTCGGACCCG TACTCACTGC
AGTTGTCACT CAATCTTCAC CACTGCGAAA TACCTACCTA CAAAAAGAAA CTTCAGACAA
GAAACTCCAC TGATGTATGA CTGGTACCGA GACTATTATG TGGGGGCTGC TCATGGCCTG
TCAAGAATTT ATTACTACCT GATGCACCCC AGCCTTCAAG TGAGCCATGC GAAGTTACAG
AGTTTGGTCA AGCCTAGTGT AGATTATGTC TGCCAGCTGA AATTCCCCTT CGGCAATTAC
CCTCCTTGTG TGGACAACAC TCCAGATCTG CTAGTCCATT GGTGCCACGG TTCCCCTGGG
GTAATCTACA TGCTCATTCA AGCCTATAAG GTGTTCAGAG AAGACCGGTA TCTCAATGAT
GCCTACCAGT GTGCCAATGT AATCTGGAAG TACGGGTTGC TGAAAAAAGG GTAGGGGCTG
TGCCCCGCAT TGCCGGGAAC GCCAAGCCTT CTGACCCTGT TCACCTCCCG CCGAATGAAG
AACCTTTATG GGCTTGTAAT TTTCCGAGGG GGTCTAATTA TGGAAAATGG ATGCAAACAC
CGAAACCCTT TTCCCCCTTT AAGGAGGCCG GAAAAAATTT TCTGGGTGAA TGCTATGCCC
AAAACCAATT CCTGCTTTAA TAAAAAGAAA TCTGCCCCCC TCCCTCCGAA ATTTGGTTTC
ACCCCTAAAC CCTTAATCAA AAAAAAAAGC CTTTCCTCTC CCCCCCCCCC ACGCTAAAAA
CACCCCCCCC CCAAATAAGG TGTGTCTA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLANCL1LanC lantibiotic synthetase component C-like 1 (bacterial)2241e-58O
Contig/Assembly ProteinLANCL2LanC lantibiotic synthetase component C-like 2 (bacterial)1494e-36
Contig/Assembly ProteinRP11-350O14.10cytokeratin associated protein1058e-23O
Contig/Assembly ProteinRP11-350O14.10cytokeratin associated protein1003e-21
Contig/Assembly ProteinLANCL3LanC lantibiotic synthetase component C-like 3 (bacterial)84.32e-16


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLancl1LanC (bacterial lantibiotic synthetase component C)-like 12142e-55O
Contig/Assembly ProteinLancl2LanC (bacterial lantibiotic synthetase component C)-like 21465e-35
Contig/Assembly ProteinLancl2LanC (bacterial lantibiotic synthetase component C)-like 21199e-27
Contig/Assembly ProteinBC004853cDNA sequence BC0048531096e-24O
Contig/Assembly ProteinLancl3LanC lantibiotic synthetase component C-like 3 (bacterial)84.72e-16


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC478897similar to LanC-like protein 1 (40 kDa erythrocyte membrane protein) (p40)2258e-59O
Contig/Assembly ProteinLOC483240similar to LanC-like protein 2 (Testis-specific adriamycin sensitivity protein)1495e-36
Contig/Assembly ProteinLOC606959similar to CG11136-PA1243e-28O
Contig/Assembly ProteinLOC491823similar to LanC lantibiotic synthetase component C-like 3843e-16


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMGC137731similar to LanC-like protein 1 (40 kDa erythrocyte membrane protein) (p40)2255e-59O
Contig/Assembly ProteinLOC507842similar to CG11136-PA1342e-31O
Contig/Assembly ProteinLOC541142similar to LanC-like protein 2 (Testis-specific adriamycin sensitivity protein)1156e-26
Contig/Assembly ProteinLOC519239similar to LanC lantibiotic synthetase component C-like 3842e-16O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
TES010016H05TES01_0016_H05.bCJ031109