[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-056727
Length:
1,138
Sequence:
[FASTA format sequence]
CCGCGTGGCT CTGGTTGTTG GCTCTGGACA GACACACTGA ATCCTAGCTC TGGTCTACCT
GGCTTCTCTG TTACCAAATT GCTCCTTGCC TGGCTGCACC TTCTGCCCTA GACTCACACC
ACCCTCCACT CTCCACGCCA GAGCACATAC ACCACACCAG CCATGTCTTC CAACACTCGA
GTGGCTCTGG TGACTGGGGC AAACAAGGGT ATTGGCTTCG CCATCGTGCG GGACCTGTGC
CGGCAGTTCG CTGGGGACGT GGTGCTCACA GCGAGGGACG TGGCACGAGG CCAGGCAGCC
GTGAAGCAAC TGCAAGCCGA GGGCCTGAGC CCGCGCTTCC ACCAGCTGGA CATCATAGAC
CTGCAGAGCA TCCGTGCCCT GTGTGACTTC CTGCGGAAGG AGTATGGTGG GCTGGATGTG
CTGGTCAACA ACGCGGCCAT CGCCTTCCAG TTGGACAATC CCACACCGTT TCATATTCAG
GCAGAACTGA CTATGAAAAC AAACTTCATG GGAACCCGAA ATGTGTGCAC AGAGCTTCTG
CCTCTAATAA AACCTCAAAG CAGAGTGGTG AATGTGTCTA GCACTGAAAG TGTCAGAACC
CTTAACGAGT GCAGCCCTGA ATTGCAGCAG AAGTTCTAGA GTGAGACCAT CTCACAGGAG
GAGCTGGTGG GGCTCATGAA CAAATTTGTG GGAGACACAC ANAACAGGGT GCACACGAAA
GAGGGGAGGA GTGATTCCAC CTACCGAGTG ACAAAAATGG GGGCTCTGTG TTGTCCCCGA
TCTTTGCCCC GAAACTGAGA GAGCACAGAG CAGGGGACAA GATCCCCCTG AAAGACTGCT
GCCCCCGGGG GGGGGGAAAT GAAATGGGGG GACCCCAACC CCCCCTAACC CAAAGTAGGA
GCCAAAACCC CCCGGAATTT GCCCCTTTGC CCCCCAAAAC AAAGGGGCCC CTGGGCCGTT
TGTTTCTTTC AAAAAAATTT TAAAAAGGGG GGTTCCCCCC GAAAAAAAAC CCCCGGGGGA
AAGGAAAAAT TTTGCCCGGG TTTTCCCCCA GGGATATTTT TCCTTTCCAA AAAATTCCTT
GGCGGCGGAC CCCAAACCCA AACCCTAAAA AAAACCCCTT TGTTAAAAAA AAAAAAAAAT
CTCCTTTTAT ATTCCCCCCG GGAAGAAGAG GCCATATCTT TTAAGAGATT TGTGTATTCC
TCTTTCATCC CCGGCGGGGA AGAGGGAGGG TTGCTCCCCT GTGTTTAAAA GAGAAAGAAA
AAAGGGTGTT TTTTATATTT TCTAAAAAAA AAAAAAAAAC CTTTTTCTCT TTTTCGTGTT
GCCCCCCACA ATAATATAA
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 326 | 3e-89 | O | ||
CBR3 | carbonyl reductase 3 | 290 | 2e-78 | O | ||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 1e-08 | |||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 1e-08 | |||
RDH14 | retinol dehydrogenase 14 (all-trans/9-cis/11-cis) | 58.2 | 1e-08 | O | ||
RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 56.6 | 4e-08 | O | ||
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 56.2 | 5e-08 | O | ||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 54.3 | 2e-07 | O | ||
DHRS4L2 | dehydrogenase/reductase (SDR family) member 4 like 2 | 52.4 | 7e-07 | O | ||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 52.4 | 7e-07 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Cbr1 | carbonyl reductase 1 | 298 | 9e-81 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 296 | 3e-80 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 296 | 3e-80 | O | ||
Cbr3 | carbonyl reductase 3 | 294 | 1e-79 | O | ||
LOC386400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 283 | 2e-76 | O | ||
Rdh13 | retinol dehydrogenase 13 (all-trans and 9-cis) | 65.5 | 1e-10 | O | ||
Rdh11 | retinol dehydrogenase 11 | 61.6 | 1e-09 | O | ||
Rdh14 | retinol dehydrogenase 14 (all-trans and 9-cis) | 60.5 | 3e-09 | O | ||
Rdh12 | retinol dehydrogenase 12 | 57.8 | 2e-08 | O | ||
Dhrsx | dehydrogenase/reductase (SDR family) X chromosome | 56.2 | 6e-08 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC610164 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 320 | 2e-87 | O | ||
LOC487748 | similar to carbonyl reductase 3 | 303 | 3e-82 | |||
LOC480785 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 289 | 4e-78 | O | ||
LOC478411 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 283 | 2e-76 | O | ||
LOC475790 | similar to Retinol dehydrogenase 12 | 71.2 | 2e-12 | |||
LOC491173 | similar to retinol dehydrogenase 11 (predicted) | 60.8 | 2e-09 | O | ||
LOC611373 | similar to Retinol dehydrogenase 13 | 59.7 | 5e-09 | O | ||
LOC490744 | similar to retinol dehydrogenase 12 (all-trans and 9-cis) | 59.3 | 7e-09 | O | ||
LOC482983 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 57 | 3e-08 | O | ||
LOC480366 | similar to Retinol dehydrogenase 11 (Retinal reductase 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) | 57 | 3e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 314 | 7e-86 | O | ||
LOC617400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 314 | 9e-86 | O | ||
MGC127133 | 20-beta-hydroxysteroid dehydrogenase-like | 305 | 4e-83 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 303 | 2e-82 | O | ||
LOC613272 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 157 | 1e-38 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 127 | 2e-29 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 127 | 2e-29 | O | ||
LOC507942 | similar to retinol dehydrogenase 11 (predicted) | 64.3 | 2e-10 | |||
MGC139505 | similar to retinol dehydrogenase 11 (predicted) | 61.2 | 1e-09 | O | ||
DSSDR2 | double substrate-specificity short chain dehydrogenase/reductase 2 | 61.2 | 1e-09 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | 20-beta-hydroxysteroid dehydrogenase | 388 | e-109 | O |
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