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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-056767

Length: 1,124

Sequence:  [FASTA format sequence]
CCACTGTGGC TCTGGAGAGT CGGACACCTA CACCGGCCAT GTCCTCCCAC ACTCATGTGG
CCCTGGTGAC TGGCTCAACA AGGGTATTGG CCTTGCCATC GTGCGGGAGC TGTGTCGGCA
GTTCTCGGGG GATGTGGTAC TCACAGCCAG GGACGTAGCT CGTGGTCAGG CGGCGGTGAA
GCAGCTGGAG GCAGAGGGCC TGAGCCCACG CTTCCACCAG CTGGACATCG ATGACCTGCA
GAGCATCCGG GTCCTGCGTG ACTTCCTGTG CAAGGAGTAT GGGGGACTGG ACGTGCTGGT
CAACAATGCG GCCATCATCA CCAAAAGTGA CGACCCCACA CTGTCTCATA TTCGGGCAGA
AATGATTATG AAAACCAACT TCGTGGGAAC CCGAGATGTG TGCACCGAGC TTCTGCCGCT
AATAAGACCC AAAGGCAGAG TGGTGAATGT GTCTAGCACT GAGGGTGTCA GAGCCCTTAA
CGAGTGCAGC CCTGAATTGC AGCAGAAGTT CAAGAGTGAG ACCATCACAG AGGAGGAGCT
GGTGGGGCTC ATGAACAAGT TTGTGGAAGA CACAAAGAAC GGGGTACACA GGAAGGAGGG
ATGGAGTGAT TCGACCTACG GAGTGACAAA AATTGGGGTC TCTGTGTTGT CCAGGATCTA
TGCCAGGAAA CTGAGTGAGC AGAGAGCAGG GGACAAGATC CTCCTGAATG CCTGCTGCCC
AGGGTGGGTG AGAACTGATA TGGGGGGACC CAAAGCCCCC AAGAGCCCAG AGGAAGGAGC
AGAGACCCCC GTGTACCTGG CCCTTTTGCC CTCGGATGCT GAGGAGCCTC ACGGTCAGTT
TGTATGTGAG AAAAAAAGTG TAGAGTGGGG TGTTCTCCCA CAGTGCTTCC CATGGGTCAC
TGCATAATTT GTGTCCTGAT TTCCCCCAAA GAGACTATAC TGTCAAAATA GCCCTATGCA
AAATGAAAAA AAAAATAAGA TCAAATTTCT CTTTTAAGTC CCACTTGGAG AAGACTGTCA
TTCTGTGAAG GCTTATGTCT TTCTTCTGAT CCCAGGGAAG GAAAAAAAAA TGTATTCCAA
TAAAGGGAAA CCCCAAAAAG AATAATGGCC CTCCTAAGGG CCAAAANAAA NAAAAANANA
ATAAANTAAA GGCCCATTTT CTCTAACTTC AGTCCGCGCC CTAAACATTT CTAAAAAAAA
CTCCCACCCT CCTCGAAACT GGAACCAAAA GAAGGCATGT TTGTTTTACT TTTTTTTGCC
CTTAAAGGTT CCAAATAAGC AATACCCACA ATTTCAACAA AACTTTTTTC GGGCTTCAAG
GGGTGTCCAC CC

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		CBR1	carbonyl reductase 1	441	e-124	O
		CBR3	carbonyl reductase 3	369	e-102	O
		RDH14	retinol dehydrogenase 14 (all-trans/9-cis/11-cis)	52.8	5e-07

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Cbr1	carbonyl reductase 1	403	e-112	O
		LOC435489	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1)	397	e-110	O
		LOC435489	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1)	397	e-110	O
		LOC386400	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1)	395	e-110	O
		Cbr3	carbonyl reductase 3	369	e-102	O
		Rdh13	retinol dehydrogenase 13 (all-trans and 9-cis)	66.2	6e-11
		Rdh14	retinol dehydrogenase 14 (all-trans and 9-cis)	59.3	7e-09
		Dhrsx	dehydrogenase/reductase (SDR family) X chromosome	51.2	2e-06

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC610164	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	437	e-123	O
		LOC480785	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	408	e-114	O
		LOC478411	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	406	e-113	O
		LOC487748	similar to carbonyl reductase 3	381	e-107
		LOC475790	similar to Retinol dehydrogenase 12	60.1	4e-09
		LOC611373	similar to Retinol dehydrogenase 13	57.4	3e-08

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		CBR1	carbonyl reductase 1	434	e-122	O
		LOC617400	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	424	e-119	O
		MGC127133	20-beta-hydroxysteroid dehydrogenase-like	421	e-118	O
		LOC516036	similar to carbonyl reductase 3	384	e-107	O
		LOC516036	similar to carbonyl reductase 3	240	1e-63	O
		LOC516036	similar to carbonyl reductase 3	240	1e-63	O
		LOC613272	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	236	3e-62	O
		LOC507942	similar to retinol dehydrogenase 11 (predicted)	52.4	7e-07

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		CBR1	20-beta-hydroxysteroid dehydrogenase	489	e-140	O