[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-056828
Length:
1,312
Sequence:
[FASTA format sequence]
TGGCTCTGGA CTCGCCCGGA GGCTCGCGGC GAGAGTGCTG CTAGTGGGCA CCCAACCCCT
TCTGCGTCGC ATCGGCTGCC AGCATTGCGC AGACCTTCGG CCTCGCGTTT GGGAGAAACC
AGACCCATCC GCTGTCCGTG CAGAGGCACC GCTGCCCCGC TCCCGACCAT GTCGTCCAAC
ATTCGCGTGG CGGTGGTGAC CGGCGGCAAC AAGGGCATCG GCCTCGCCAT CGTGCGTGAT
CTGTGCCAGC AGTTCTCGGG GGATGTGATG CTTACGGCGC GGGACGTGGC GAGAGGCCAG
GCGGCGGTGC AGCAGCTGCA GGCTGAGGGT CTGAGCCCGC GCTTCCACCA GCTGGATATC
GACGACCTTC GGAGCATCCA GGCCCTGCGC GACTTCCTGC TCAAGGAGTA TGGGGGACTC
AACGTGCTGG TCAATAACGC GGGCATCGCT TTCAAAACTG TTGATCCCAC ACCGTTTCAT
ATTCAAGCTG AAGTAACTAT GAAAACAAAC TTCTTGGGAA CCCGAAATGT ATGCACAGAG
CTCCTGCCTC TGATAAAACC CCAAGGCAGA GTGGTGAATG TGTCTAGCAC TGAGAGTGTC
AGAGCTCTTA ACAACTGCAG TCCTGAACTG CAACAGAAAT TTCAGAGTGA GACCCTCACA
CATGAAGAGC TGGTGGGGCT CATGAACAAG TTTGTGGAAG ACCCCAAGAA CGGAGTCCCT
TAAAAGGAAG GCTGGGCCAG TACCGCGTAC GGAGTGACAA AAATCGGGGT CACTGTACTC
TCCCGGAATC TTGGCCAGGA AACTGAATTG ATCATATACC AGGGGAAAAA ATTCCTCCTG
AATAGCTGCT GCTCAAAGGT GGGGGAAAAA TTAAATGGGT TGGACCCAAA GCCCCCTAAA
ACCCCGAAGA AAGGGGCGAA AACCCCCGGG TACCTGGCCC TTTTCCCCCC AAAAGCTAAG
GGGCCCTCCG GCTCTTTTGT TTTTGAAAAA AAAATTTTTA AAAGGGGGGT TCCCCCTTTA
ACACTCCCCC GGGGCCAAGG CAAAATTTGG GTCCCGATTT CCCCAAAGGG ATATTTTCCT
TATCAAAAAT TTCCCTGGGC AAAAAAAAAA AAAAAAAGGC CCTTTTTGTC TCATTTTCGG
GGCCCGGCCC CTAAATATAT CTATAAAAAA AATCCCCATC CCCCCCCCTG ACCGGGAATA
AAAAAGAAAG CAAATGGTTT TAATAATATT TTTCCCCCCT TATGGGGTCA AAAATAAAAA
TACTCCCAAT TTCAAAAGAA GACTTTTTCT CATTCTCATT GGGTGTGTGA CACACCAAAT
ATTTCTACTG TGGTGTCCAG GATAGCACC
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 373 | e-103 | O | ||
CBR3 | carbonyl reductase 3 | 322 | 6e-88 | O | ||
RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 62.8 | 6e-10 | O | ||
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 62.8 | 6e-10 | O | ||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 2e-08 | |||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 2e-08 | |||
DHRS10 | dehydrogenase/reductase (SDR family) member 10 | 54.3 | 2e-07 | O | ||
PECR | peroxisomal trans-2-enoyl-CoA reductase | 52 | 1e-06 | O | ||
RDH14 | retinol dehydrogenase 14 (all-trans/9-cis/11-cis) | 51.6 | 1e-06 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 338 | 1e-92 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 338 | 1e-92 | O | ||
Cbr1 | carbonyl reductase 1 | 337 | 2e-92 | O | ||
LOC386400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 327 | 2e-89 | O | ||
Cbr3 | carbonyl reductase 3 | 318 | 6e-87 | O | ||
Rdh11 | retinol dehydrogenase 11 | 66.6 | 5e-11 | O | ||
Rdh12 | retinol dehydrogenase 12 | 62.8 | 8e-10 | O | ||
Rdh13 | retinol dehydrogenase 13 (all-trans and 9-cis) | 59.3 | 9e-09 | O | ||
Dhrsx | dehydrogenase/reductase (SDR family) X chromosome | 55.1 | 2e-07 | O | ||
Rdh14 | retinol dehydrogenase 14 (all-trans and 9-cis) | 53.9 | 4e-07 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC610164 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 350 | 2e-96 | O | ||
LOC487748 | similar to carbonyl reductase 3 | 333 | 2e-91 | |||
LOC480785 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 318 | 6e-87 | O | ||
LOC478411 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 311 | 1e-84 | O | ||
LOC475790 | similar to Retinol dehydrogenase 12 | 69.3 | 8e-12 | |||
LOC480366 | similar to Retinol dehydrogenase 11 (Retinal reductase 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) | 64.7 | 2e-10 | |||
LOC490744 | similar to retinol dehydrogenase 12 (all-trans and 9-cis) | 63.5 | 4e-10 | O | ||
LOC476420 | similar to dehydrogenase/reductase (SDR family) member 10 | 58.5 | 1e-08 | O | ||
LOC491173 | similar to retinol dehydrogenase 11 (predicted) | 57.8 | 2e-08 | O | ||
LOC611373 | similar to Retinol dehydrogenase 13 | 55.5 | 1e-07 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 348 | 5e-96 | O | ||
LOC617400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 345 | 5e-95 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 332 | 3e-91 | O | ||
MGC127133 | 20-beta-hydroxysteroid dehydrogenase-like | 328 | 6e-90 | O | ||
LOC613272 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 189 | 5e-48 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 157 | 2e-38 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 157 | 2e-38 | O | ||
DSSDR2 | double substrate-specificity short chain dehydrogenase/reductase 2 | 65.1 | 1e-10 | O | ||
LOC507942 | similar to retinol dehydrogenase 11 (predicted) | 64.7 | 2e-10 | O | ||
MGC139505 | similar to retinol dehydrogenase 11 (predicted) | 60.8 | 2e-09 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | 20-beta-hydroxysteroid dehydrogenase | 371 | e-104 | O |
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