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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-057267

Length: 1,242

Sequence [FASTA format sequence]
TTTACTTATT TTNNTTCCTA CTGCGTTTCC TCGTGCGGAG CGTGATTCGT TTCGCTTCAG
GCATGATGGC ACATATGGCG TTCCCCAATG CTTATGTGTA CTGTATCACA TCCTTGCCCC
AAAGCTACTT TAATTCTGCT GCGCAGGCTC AGTCCAGAGA TATCGCGACG ACACGAACAT
TAAGATCCCA AACCTTCTTC ACCAAACGGA GAGTAGGCCT CCAATCCTCT AACCCTCCCT
ATGGCACATG CTTACCCTGC ATGGGCAAGT ATCGCTGTGC TTTACGTACA ACTCTATGAT
GCTGTCTGGG GACACTGCCT ACCTGCAGAT GGCCCATGGC TAAGCAAAGA CAAAGTCCGA
ACTGTTTGAC CAACCGTTCC ATCACCTTCC TGTGTGGTGA TGCGGGCCCC CTGCCCATGG
CTGCTGTGGT GCATGACCCG ATGAACAATG CGAAGCAGGC AGAACACTGT ATCGCCCGGC
TAATTCACCT AAATAAGATT GACCCGCATG CTCCGAATGA AATGCTGTAT GGACGAATGG
GCTACATCTA TGCTCTTCCC TTTGTGAATA TGAACTTTGG AGTACAAAAG ATTCCTCGAA
GCCATATTCA ACATATTTGT GAAACAGTCT TAACCTCTGG AGAAAACCTA GCTAGAACAA
TACACTTCAC AGAATAAACT CCACTGATGT ATGAATGGTA CCTATAATAA TATGTGGGGG
CTGCTCATGG CCTGTCAAGA ATTTATTACT ACCTGATGCA GACCATCCTT TCAATGAACC
ATGCAAAGTT CCAAAGTTTG GTCAAGCCTA ATGCCGATTA TGTCTGCCAA CTGAAATTCC
CTTCCCGCTA ATTACCCTCC TTGATTGGAA CAACCTCAAA AATTGCTAAT CCATTGGTGC
CACAGTTCCC CTGGGGTAAT CCAACTGTCC CTTCCAGCCT ATTAAGGTGT TCACATGAAA
AAAGGAATCT CCCTGTATGC CTACCAATGT GGCCTAATTT TATTCTGAAA ATCCGGGTTG
TCTAAAAAAT GGGATACCGG CCTGTCTCTT GATAATTGTG GGTTACTCCC TATTCCCTCC
CTGAACCTTT TTCAACTCCC CTCCTGGTAA TTTATATTCC TCTCTTAAAG TCTCTTTAAA
ATTCTCCCTC ACAGGGGTCC TTAATTATTT GTCAAGAATT CTTCATTCCA TAGATCCCTG
AATACCCTCT CTTCCCCTCT CTTTTAAGTA ATAGCCTCGG AACACATTAA TTTCCCTGGG
CAGAACATCA TATTGTGCCC CACAAATCCA AATGCTCTCT CCGCCGTCAA CCTTTATTAT
TGTATATTTC TCTCCACTTC ATAACTACTT AATTGATACT ATTTCGTGAT AAT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLANCL1LanC lantibiotic synthetase component C-like 1 (bacterial)2694e-80O
Contig/Assembly ProteinLANCL2LanC lantibiotic synthetase component C-like 2 (bacterial)1331e-38
Contig/Assembly ProteinLANCL3LanC lantibiotic synthetase component C-like 3 (bacterial)51.22e-06


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLancl1LanC (bacterial lantibiotic synthetase component C)-like 12521e-74O
Contig/Assembly ProteinLancl2LanC (bacterial lantibiotic synthetase component C)-like 21322e-38
Contig/Assembly ProteinLancl2LanC (bacterial lantibiotic synthetase component C)-like 21322e-38
Contig/Assembly ProteinLancl3LanC lantibiotic synthetase component C-like 3 (bacterial)51.62e-06


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC478897similar to LanC-like protein 1 (40 kDa erythrocyte membrane protein) (p40)2562e-75O
Contig/Assembly ProteinLOC483240similar to LanC-like protein 2 (Testis-specific adriamycin sensitivity protein)1315e-38
Contig/Assembly ProteinLOC491823similar to LanC lantibiotic synthetase component C-like 350.44e-06


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMGC137731similar to LanC-like protein 1 (40 kDa erythrocyte membrane protein) (p40)2562e-76O
Contig/Assembly ProteinLOC541142similar to LanC-like protein 2 (Testis-specific adriamycin sensitivity protein)1303e-37


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
TES010039H11TES01_0039_H11.b