[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-057701
Length:
1,192
Sequence:
[FASTA format sequence]
GTGGCTATGG GTTACAAATT GCTCCTTGCC TGGCTGCACC TTCTGCCCTA GACTCAACCA
CCCCTCCACT CTCCACGCCA GAGCACATAC ACCACACCAG CCACGTCTTC CAACACTCGA
GTGGCTCTGG TGACTGGGGC AAACAAGGGT ATTGGCTTCT CCATCGTGCG GGACCTGTGC
CGGCAGTTCG CTGGGGACGT GGTGCTCACA GCGAGGGACG TGGCACGAGG CCAGGCAGCC
GTGAAGCAAC TGCAAGCCGA GGGCCTGAGC CCGCGCTTCC ACCAGCTGGA CATCATAGAC
CTGCAGAGCA TCCGTGCCCT GTGTGACTTC CTGCGGAAGG AGTATGGTGG GCTGGATGTG
CTGGTCAACA ACGCGGCCAT CGCCTTCCAG TTGGACAATC CCACACCGTT TCATATTCAG
GCAGAACTGA CTATGAAAAC AAACTTCATG GGAACCCGAA ATGTGTGCAC AGAGCTTCTG
CCTCTAATAA AACCTCAAGG CATAGTGGTG AGTGTGTCTA GCACTGAAGG TGTCAGAGCC
CTTAACGAGT GCAGCCCTGA ATTGCAGCAG AAGTTCAAGA GTGAGACCAT CCCATAGGAG
GAGCTGGTGG GGCTCATGAA CAAGTTTGTG GAAGACACTA ATAACGGGGT GCACAGGAAT
GAAGGATGGA GTGATTCGAC CCACGGAGTG ACCAAAATTG GGGTCTCTGT GTTGCCCCGG
TATCTATGCC TGGAAACTTG AAATAACTCA TAGCCTGGTG ACTATAATCT CCCTGAATGC
CTGCTGCCCA ATGGTGGTTG ATAACTGAAC TTGTGGGGGA CCTAATGCCT CACATATCCC
TAAGGTATGA ATCATAAACC CCCCGGGTAC TCCGGCCCTT TTTGTCCTCC GAACCTAATG
GGTCCTCCAG GTCCGTTTTT TTCCGATCAA AAAAACTTTA TAAATGGGGT GTTTCCCCTC
TAAAATTACC CCTTGGTTCA ATGATATATT TTGGTCCTGA TTTTCCCCCA AGGGTTTATT
TCCCCTTCTC CAAATTATCC CGGTTCCTAA TATCTATAAT CTTTAACCTC AAAATTCCCC
GCCTTTTATA AATAATCTAA TAACTCTTCC CTTTAAATCC CCCCCGGGGA AAACGGCTCC
CTATCCTCGT AAGAGCTTTT GTAAATCTCC ACTTTACTCC CCTGTGGGGA ATTTGGGTTA
GTTTCTCCTA CAGGTTAATT AACTTCTAAA GTGTATACAA TTCTCCTTTT TTTTATAAAA
TCAAATATAT ATAGAGCTCC TTCTCTCTCA CATCCTTGCT CGCGCCCTTA TTATTCTATT
ATAAAAATCT CTCTCTCCTC CTCTGACTAA TACAGAAAAT GATAGACATT TGGTGTATCA
TATTTTCTGC ATATATACGT ATCTCTGATT ACCCTCTACT CATTCTTAAT ATGATCTCTA
TCCTTCTTCT TCTTGGTGTC CTCTCATACT TATTTCTA
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 322 | 2e-88 | O | ||
CBR3 | carbonyl reductase 3 | 289 | 4e-78 | O | ||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 57.4 | 2e-08 | |||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 57.4 | 2e-08 | |||
RDH14 | retinol dehydrogenase 14 (all-trans/9-cis/11-cis) | 55.8 | 7e-08 | |||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 53.1 | 4e-07 | |||
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 52.8 | 6e-07 | |||
RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 52 | 1e-06 | |||
DHRS4L2 | dehydrogenase/reductase (SDR family) member 4 like 2 | 51.2 | 2e-06 | |||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 51.2 | 2e-06 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Cbr1 | carbonyl reductase 1 | 296 | 3e-80 | O | ||
Cbr3 | carbonyl reductase 3 | 296 | 3e-80 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 289 | 5e-78 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 289 | 5e-78 | O | ||
LOC386400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 278 | 6e-75 | O | ||
Rdh13 | retinol dehydrogenase 13 (all-trans and 9-cis) | 62.4 | 9e-10 | |||
Rdh11 | retinol dehydrogenase 11 | 58.2 | 2e-08 | |||
Rdh14 | retinol dehydrogenase 14 (all-trans and 9-cis) | 57 | 4e-08 | |||
Rdh12 | retinol dehydrogenase 12 | 56.6 | 5e-08 | |||
Dhrsx | dehydrogenase/reductase (SDR family) X chromosome | 56.2 | 6e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC610164 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 324 | 9e-89 | O | ||
LOC487748 | similar to carbonyl reductase 3 | 300 | 2e-81 | |||
LOC480785 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 280 | 3e-75 | O | ||
LOC478411 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 276 | 3e-74 | O | ||
LOC475790 | similar to Retinol dehydrogenase 12 | 67.8 | 2e-11 | |||
LOC491173 | similar to retinol dehydrogenase 11 (predicted) | 57.8 | 2e-08 | |||
LOC611373 | similar to Retinol dehydrogenase 13 | 57.4 | 3e-08 | |||
LOC490744 | similar to retinol dehydrogenase 12 (all-trans and 9-cis) | 56.6 | 5e-08 | O | ||
LOC490616 | similar to dehydrogenase/reductase (SDR family) member 2 isoform 2 | 55.5 | 1e-07 | |||
LOC482983 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 54.7 | 2e-07 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
MGC127133 | 20-beta-hydroxysteroid dehydrogenase-like | 314 | 1e-85 | O | ||
CBR1 | carbonyl reductase 1 | 313 | 1e-86 | O | ||
LOC617400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 306 | 9e-84 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 304 | 1e-82 | O | ||
LOC613272 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 164 | 2e-40 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 130 | 2e-30 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 130 | 2e-30 | O | ||
LOC507942 | similar to retinol dehydrogenase 11 (predicted) | 60.8 | 2e-09 | |||
DSSDR2 | double substrate-specificity short chain dehydrogenase/reductase 2 | 58.2 | 1e-08 | |||
MGC139505 | similar to retinol dehydrogenase 11 (predicted) | 57.8 | 2e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | 20-beta-hydroxysteroid dehydrogenase | 385 | e-110 | O |
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