[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-058155
Length:
1,277
Sequence:
[FASTA format sequence]
TTTCGCGTTG GCTAGACCCT GAATCCAGCT CTGGTCTACC TGGCTTCTCT GTTACCAAAT
TGCTCCTTGC CTGGCTGCAC CTTCTGCCCT AGACTCACAC CACCCTCCAC TCTCCACGCC
AGAGCACATA CACCACACCA GCCATGTCTT CCAACACTCG AGTGGCTCTG GTGACTGGGG
CAAACAAGGG TATTGGCTTC GCCATCGTGC GGGACCTGTG CCGGCAGTTC GCTGGGAACG
TGGTGCTCAC AGCGAGGGAC GTGGCACGAG GCCAGGCAGC CGTGAAGCAA CTGCAAGCCG
AGGGCCTGAG CCCGCGCTTC CACCAGCTGG ACATCATAGA CCTGCAGAGC ATCCGTGCCC
TGTGTGACTT CCTGGGGAAG GAGTATGGTG GGCTGGATGT GCTGGTCAAC AACGCGGCCA
TCGCCTTCCA GTTGGACAAT CCCACACCGT TTCATATTCA GGCAGAACTG ACTATGAAAA
CAAACTTCAT GGGAACCCGA AATGTGTGCA CAGAGCTTCT GCCTCTAATA AAACCTCAAG
GCAGAGTGGT GAATGTGTCT AGCACTGAAG GTGTCAGAGC CCTTAACGAG TGCAGCCCTG
AATTGCAGCA GAAGTTCAAG AGTGAGACCT TCACAGATGA GGAACTGGTG GGGCTCATGA
ACAAGTTTGT GGAAGACACA AAAAACGGGG TGCACAAGAA GGGAGGAATG GATTGAATCC
AACCTACGGA GTGACAAAAA TTTGGGGTCT CTGTGTTGTC CAGAATCTTT GCCCAGGAAA
CTTAAAAAAG CAAAAAACCG GGGGACAAAA TCCCCCCTGA AAGGCTTGCC GCCCCAAGGG
GGGGTAAAAA CTGAAATGGG GGGAAACCAA AACCCCCCAA AACCCCCAAA GGTTGGAACC
AAAAACCCCC CGGGAATTGG CCCCTTTTTC CCCCCAAATA CAAAGGGGCC CCAGGGCCAT
TTTTTTTCAC AAAAAAATTT TTTAAAAGGG GGGGTTCCCC CCAAAAAAAT CCCCCGGAGA
AAAAGAAAAA ATTGGGGCCC GTATTTCCCC AAAGGGAATT TTTCCCTACT AAAAATTTTC
CGGGGAAAAA AAACCAAAAA TACACACAAA AAAAAACCCC TTTTTTAAAA AAACACAATT
TTCCTTTTTA AACCCCCCCG GGGAAAACGG CCTTTTTTCA GAAGAATTTT TTTGTTTTCC
CCTTCCTTCC GGCGGGAGAA AAGAGAGGGT CTCCCCTTGT GTAAAAAAGT GAGGAAGGAG
ATGTTCTTTT TTTTATTTCA AAATAAAAAA AAAAAAAAGC ATATTTTTAT TTATCGTTGG
CCCGCTTCAA ATATAAAATA AACACCCCCC CCCCCTCACA CACATATATA AGAATATGTT
CTTCTTN
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 317 | 2e-86 | O | ||
CBR3 | carbonyl reductase 3 | 284 | 1e-76 | O | ||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 57.4 | 3e-08 | |||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 57.4 | 3e-08 | |||
RDH14 | retinol dehydrogenase 14 (all-trans/9-cis/11-cis) | 56.6 | 4e-08 | |||
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 55.8 | 8e-08 | O | ||
RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 55.1 | 1e-07 | O | ||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 55.1 | 1e-07 | O | ||
DHRS4L2 | dehydrogenase/reductase (SDR family) member 4 like 2 | 53.1 | 5e-07 | O | ||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 53.1 | 5e-07 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 288 | 1e-77 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 288 | 1e-77 | O | ||
Cbr3 | carbonyl reductase 3 | 286 | 4e-77 | O | ||
Cbr1 | carbonyl reductase 1 | 285 | 6e-77 | O | ||
LOC386400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 272 | 5e-73 | O | ||
Rdh13 | retinol dehydrogenase 13 (all-trans and 9-cis) | 65.1 | 2e-10 | O | ||
Rdh11 | retinol dehydrogenase 11 | 61.2 | 2e-09 | O | ||
Rdh14 | retinol dehydrogenase 14 (all-trans and 9-cis) | 58.9 | 1e-08 | |||
Rdh12 | retinol dehydrogenase 12 | 57.4 | 3e-08 | O | ||
Dhrsx | dehydrogenase/reductase (SDR family) X chromosome | 55.5 | 1e-07 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC610164 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 308 | 1e-83 | O | ||
LOC487748 | similar to carbonyl reductase 3 | 291 | 9e-79 | |||
LOC480785 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 285 | 7e-77 | O | ||
LOC478411 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 280 | 3e-75 | O | ||
LOC475790 | similar to Retinol dehydrogenase 12 | 72.8 | 7e-13 | |||
LOC611373 | similar to Retinol dehydrogenase 13 | 59.3 | 8e-09 | O | ||
LOC491173 | similar to retinol dehydrogenase 11 (predicted) | 59.3 | 8e-09 | O | ||
LOC490744 | similar to retinol dehydrogenase 12 (all-trans and 9-cis) | 58.9 | 1e-08 | O | ||
LOC490616 | similar to dehydrogenase/reductase (SDR family) member 2 isoform 2 | 56.6 | 5e-08 | |||
LOC482983 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 55.5 | 1e-07 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
MGC127133 | 20-beta-hydroxysteroid dehydrogenase-like | 312 | 3e-85 | O | ||
CBR1 | carbonyl reductase 1 | 303 | 3e-82 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 296 | 2e-80 | O | ||
LOC617400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 296 | 3e-80 | O | ||
LOC613272 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 158 | 8e-39 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 125 | 9e-29 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 125 | 9e-29 | O | ||
LOC507942 | similar to retinol dehydrogenase 11 (predicted) | 65.9 | 7e-11 | |||
DSSDR2 | double substrate-specificity short chain dehydrogenase/reductase 2 | 60.8 | 2e-09 | O | ||
MGC139505 | similar to retinol dehydrogenase 11 (predicted) | 59.7 | 5e-09 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | 20-beta-hydroxysteroid dehydrogenase | 374 | e-105 | O |
|