[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-058351
Length:
1,303
Sequence:
[FASTA format sequence]
TTTTCGCTGT GGCTATGGAC TGGCTTCTCT GTTACCAAAT TGCTCCTTGC CTGGCTGCAC
CTTCTGCCCT AGACTCACAC CACCCTCCAC TCTCCACGCC AGAGCACATA CACCACACCA
GCCATGTCTT CCAACACTCG AGTGGCTCTG GTGACTGGGG CAAACAAGGG TATTGGCTTC
GCCATCGTGC GGGACCTGTG CCGGCAGTTC GCTGGGGACG TGGTGCTCAC AGCGAGGGAC
GTGGCACGAG GCCAGGCAGC CGTGAAGCAA CTGCAAGCCG AGGGCCTGAG CCCGCGCTTC
CACCAGCTGG ACATCATAGA CCTGCAGAGC ATCCGTGCCC TGTGTGACTT CCTGCGGAAG
GAGTATGGTG GGCTGGATGT GCTGGTCAAC AACGCGGCCA TCGCCTTCCA GTTGGACAAT
CCCACACCGT TTCATATTCA GGCAGAACTG ACTATGAAAA CAAACTTCAT GGGAACCCGA
AATGTGTGCA CAGAGCTTCT GCCTCTAATA AAACCTCAAG GCAGAGTGGT GAATGTGTCT
AGCACTGAAG GTGTCAGAGC CCTTAACGAG TGCAGCCCTG ATTTGCAGCA GAAGTTCAAG
AGTGAGACCT TCACAGAAGA AGAGCTGGTG GGGCTCATGA ACAAGTTTGT GGAAGACCCA
AAAACGGGGT GCACAGAAAG AAGGATGAAT TGATTCCACT ACGGAGTGAC CAAATTGGGG
GTCTCTGGGT TGCCCAGAAT TCATGCCAGG AAACTGAAAA ACCCAAAAAA CCGGGGAAAA
AAATCCCCCG GAAAGCCCCC CGCCCCAGGG GGGTGAAAAA TTAACATGGG GGGGAACCCA
AACCCCCCCA AAACCCCAAA GGTGGGAACC AAAACCCCCC CTGATCTTGG GCCCTTTTGC
CCCCAAAAAG AAAGGGCCCC CCTGGGCCAT TTGTTACCGA AAAAAAATTT TTAAAAAGGG
GGTTTCCCCC CGAAAAACTC CCCCCGGGAA AAAACAAATT TTGCCCCGGA TTTCCCCACA
GAGAATTTTC CCCTCTAAAA AATTTCCTGG GGGAAAAACC CTTAATCCCT ACCCTTAAAA
AACGCCTTTT TTTAAAAAAA CAAATTTTCC TTTTATAACC CCCCGGGGGA AAGGGGCTTT
TTTCTGGGAG GTTTTTTGTT TTCCCCTTTC CCCCGGGGAA AAAAAAGGGC TTTCCCCTCT
TGTATAAAAT GTGGCGGGAA AATAAAAAAC AAAAAAAAAA TCCCTTTTGT TTTTTATGTG
GCCCGCCGCC TTATTTTTTA AAAAAACACC CCTCCCCCCC ACAAAAAAAA AAATATAAGA
TTTGTTCTTT ATTTTC
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 320 | 2e-87 | O | ||
CBR3 | carbonyl reductase 3 | 285 | 5e-77 | O | ||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 2e-08 | |||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 2e-08 | |||
RDH14 | retinol dehydrogenase 14 (all-trans/9-cis/11-cis) | 56.6 | 5e-08 | |||
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 55.8 | 8e-08 | |||
RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 55.1 | 1e-07 | |||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 54.3 | 2e-07 | O | ||
DHRS4L2 | dehydrogenase/reductase (SDR family) member 4 like 2 | 52.4 | 9e-07 | O | ||
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 52.4 | 9e-07 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Cbr3 | carbonyl reductase 3 | 290 | 2e-78 | O | ||
Cbr1 | carbonyl reductase 1 | 289 | 4e-78 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 285 | 6e-77 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 285 | 6e-77 | O | ||
LOC386400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 268 | 7e-72 | O | ||
Rdh13 | retinol dehydrogenase 13 (all-trans and 9-cis) | 63.5 | 5e-10 | |||
Rdh11 | retinol dehydrogenase 11 | 60.1 | 5e-09 | |||
Rdh14 | retinol dehydrogenase 14 (all-trans and 9-cis) | 58.9 | 1e-08 | |||
Rdh12 | retinol dehydrogenase 12 | 57.4 | 3e-08 | |||
Dhrsx | dehydrogenase/reductase (SDR family) X chromosome | 56.6 | 6e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC610164 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 315 | 6e-86 | O | ||
LOC487748 | similar to carbonyl reductase 3 | 294 | 1e-79 | |||
LOC480785 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 281 | 8e-76 | O | ||
LOC478411 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 279 | 4e-75 | O | ||
LOC475790 | similar to Retinol dehydrogenase 12 | 72.8 | 7e-13 | |||
LOC491173 | similar to retinol dehydrogenase 11 (predicted) | 59.3 | 8e-09 | |||
LOC490744 | similar to retinol dehydrogenase 12 (all-trans and 9-cis) | 58.9 | 1e-08 | O | ||
LOC611373 | similar to Retinol dehydrogenase 13 | 57.8 | 2e-08 | |||
LOC490616 | similar to dehydrogenase/reductase (SDR family) member 2 isoform 2 | 56.6 | 5e-08 | |||
LOC482983 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 55.5 | 1e-07 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
MGC127133 | 20-beta-hydroxysteroid dehydrogenase-like | 310 | 2e-84 | O | ||
CBR1 | carbonyl reductase 1 | 305 | 5e-83 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 301 | 1e-81 | O | ||
LOC617400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 297 | 1e-80 | O | ||
LOC613272 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 155 | 9e-38 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 124 | 1e-28 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 124 | 1e-28 | O | ||
LOC507942 | similar to retinol dehydrogenase 11 (predicted) | 65.9 | 7e-11 | |||
DSSDR2 | double substrate-specificity short chain dehydrogenase/reductase 2 | 60.8 | 2e-09 | |||
MGC139505 | similar to retinol dehydrogenase 11 (predicted) | 59.7 | 5e-09 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | 20-beta-hydroxysteroid dehydrogenase | 372 | e-104 | O |
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