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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-058412

Length: 1,140

Sequence:  [FASTA format sequence]
NNNCCTGCGT TGCTCTGGAC AAAACCTGAA TCCTAGCTCT GGTCTACCTG GCTTCTCTGT
TACCAAATTG CTCCTTGCCT GGCTGCACCT TCTGCCCTAG ACTCACACCA CCCTCCACTC
TCCACGCCAG AGCACATACA CCACACCAGC CATGTCTTCC AACACTCGAG TGGCTCTGGT
GACTGGGGCA AACAAGGGTA TTGGCTTCGC CATCGTGCGG GACCTGTGCC GGCAGTTCGC
TGGGGACGTG GTGCTCACAG CGAGGGACGT GGCACGAGGC CAGGCAGCCG TGAAGCAACT
GCAAGCCGAG GGCCTGAGCC CGCGCTTCCA CCAGCTGGAC ATCATAGACC TGCAGAGCAT
CCGTGCCCTG TGTGACTTCC TGCGGAAGGA GTATGGTGGG CTGGATGTGC TGGTCGACAA
CGCGGCCATC GCCTTCCAGT TGGACAATCC CACACCGTTT CATGTTCAGG CAGAACTGAC
TATGAAAACA AACTTCATGG GAAACCGAAA TGTGTGCACA GAGCTCCTGC CTCTAATAAA
ACTTCAAGGC AAAGTGGTGA ATGTGTCTAA CCCTTAAGGG GTCAGAACCC CTTTACAAGT
GCAGCCCTGA ATTTGCACAA AAATTCCAAA AATGAAACCT CCCCAAAGAA AGACCCGGGG
GGGCCTCCTG AACAATTTTT TGGAAAAAAC CAAAAAACGG GGGGCCCCGA AAGGGGGGTA
GAATTATTCC CCCCCCCCGG AGGGCCAAAA TTGGGGGTCC CCTGTTTTTC CCCCAATTTT
TTCCCCGAAA CCTGAAAAAC CAAAAACCGG GGGGAAAAAA CCCCCCGAAA ACCCCGCCCC
CCCCGGGGGG GGAAAAAAAC CAAAGGGGGG GGAACCCAAA CCCCCCAAAA CCCCCCAGGG
GGGGGGAAAA AAAACCCCCC GGGAATGGGC CCTTTTCCCC CCACAAAAAA AAAAGGGCCC
CCGGGGCCTT TTTTTTTTCC CAAAAAAAAT TTTAAAAAGG GGGGGTTCCC CCCCAAAAAA
ACCCCCCCGG GGAAAAAAAA AAATATTTGC GCCCCCTTCT CCCCCAGAGG AAGTTTCCTC
CCCAAAAAAA ATCTCTCGCG CGGGGCAAAA AAATAAAAAT ACAAAAAAAA ACACACCCTT
TTGTAAAAAA AAAATTATTT TTTCTTTTTT TTCTCCCCGC CAGAAGAAGA GGCGTTTTTT
TTGAAGGGAG GTTTTTTCTT TTCCCCCCCT CCCCCCGCGG GAAGGAGAGA AGGTCCTCCT
CCCTCCACTA AACAAAAAGG AGAGAAGGGT TTTTCTTTTT CTTTATAAAA AAAA

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		CBR1	carbonyl reductase 1	237	1e-62	O
		CBR3	carbonyl reductase 3	215	5e-56	O
		LOC388963	similar to short-chain dehydrogenase/reductase 1	55.8	6e-08
		LOC388963	similar to short-chain dehydrogenase/reductase 1	55.8	6e-08
		LOC654042	similar to dehydrogenase/reductase (SDR family) member 4 like 2	55.1	1e-07	O
		RDH12	retinol dehydrogenase 12 (all-trans/9-cis/11-cis)	53.5	3e-07	O
		RDH14	retinol dehydrogenase 14 (all-trans/9-cis/11-cis)	53.1	4e-07	O
		RDH11	retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	52	9e-07	O
		DHRS4L2	dehydrogenase/reductase (SDR family) member 4 like 2	52	9e-07	O
		LOC654042	similar to dehydrogenase/reductase (SDR family) member 4 like 2	52	9e-07	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Cbr3	carbonyl reductase 3	220	2e-57	O
		Cbr1	carbonyl reductase 1	213	4e-55	O
		LOC435489	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1)	210	3e-54	O
		LOC435489	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1)	210	3e-54	O
		LOC386400	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1)	197	2e-50	O
		Rdh13	retinol dehydrogenase 13 (all-trans and 9-cis)	60.1	4e-09	O
		Rdh11	retinol dehydrogenase 11	57	4e-08	O
		Rdh14	retinol dehydrogenase 14 (all-trans and 9-cis)	55.8	8e-08	O
		Rdh12	retinol dehydrogenase 12	54.3	2e-07	O
		Dhrsx	dehydrogenase/reductase (SDR family) X chromosome	53.9	3e-07	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC610164	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	236	4e-62	O
		LOC487748	similar to carbonyl reductase 3	223	9e-59
		LOC480785	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	209	4e-54	O
		LOC478411	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	207	2e-53	O
		LOC475790	similar to Retinol dehydrogenase 12	67.8	2e-11
		LOC490616	similar to dehydrogenase/reductase (SDR family) member 2 isoform 2	56.6	4e-08
		LOC491173	similar to retinol dehydrogenase 11 (predicted)	55.8	7e-08	O
		LOC611373	similar to Retinol dehydrogenase 13	55.1	1e-07	O
		LOC490744	similar to retinol dehydrogenase 12 (all-trans and 9-cis)	55.1	1e-07	O
		LOC482983	similar to retinol dehydrogenase 14 (all-trans and 9-cis)	52.4	8e-07	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		MGC127133	20-beta-hydroxysteroid dehydrogenase-like	234	1e-61	O
		LOC516036	similar to carbonyl reductase 3	224	1e-58	O
		CBR1	carbonyl reductase 1	222	5e-58	O
		LOC617400	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	215	6e-56	O
		LOC613272	similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+])	74.3	2e-13	O
		LOC507942	similar to retinol dehydrogenase 11 (predicted)	60.8	2e-09
		DSSDR2	double substrate-specificity short chain dehydrogenase/reductase 2	57	3e-08	O
		MGC139505	similar to retinol dehydrogenase 11 (predicted)	56.2	5e-08	O
		LOC507931	similar to Retinol dehydrogenase 13	54.7	1e-07	O
		SDR3	short-chain dehydrogenase/reductase	53.9	2e-07	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		CBR1	20-beta-hydroxysteroid dehydrogenase	278	1e-76	O