[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20060611S-058416
Length:
1,121
Sequence:
[FASTA format sequence]
TTCCTACTGT GGCTACGGCT GATCCAGCTC TGGTCTACCT GGCTTCTCTG TTACAAATTG
CTCCTTGCCT GGCTGCACCT TCTGCCCTAG ACTCACACCA CCCTCCACTC TCCACGCCAG
AGCACATACA CCACACCAGC CATGTCCTCC AACACTCGAG TGGCTCTGGT GACTGGGGCA
AACAAGGGTA TTGGCTTCGC CATCGTGCGG GACCTGTGCC GGCAGTTCGC TGGGGACGTG
GTGCTCACAG CGAGGGACGT GGCACGAGGC CAGGCAGCCG TGAAGCAACT GCAAGCCGAG
GGCCTGAGCC CGCGCTTCCA CCAGCTGGAC ATCATAGACC TGCAGAGCAT CCGTGCCCTG
TGTGACTTCC TGCGGAAGGA GTATGGTGGG CTGGATGTGC TGGTCAACAA CGCGGCCATC
GCCTTCCAGT TGGACAATCC CACACCGTTT CATATTCAGG CAGAACTGAC TATGAAAACA
AACTTCATGG GAACCCGAAA TGTGTGCACA GAGCTTCTGC CCTCTATAAA ACCTCAAGGC
AAAGTGGTGA ATGTGTCTAG CACTGAAAGT GTCAGAGCCC TTACGAGTGC AGCCCTGAAT
TGCAGCAGAA GTTCAGGAGT GAGACCTTCA CAGAGGAAGA GCTGGTGGGG CTCATGAACA
AGTTTGTGAA AAACCCAAGA ACGGGGTGCA CAGGAAGGGA GGAAGGAATG ATTTCCACCT
ACGGAATGGA AAAAATTGGG GGCCCTGGGT TTGCCCGGAT CTTTTCCCGG AAACTTGAAA
AAACCAGGGA CCCCGGGAAA AAAACCCCCC CGAAATGCCC GCCGCCCCGG GGGGGGGAAA
AAAATAAACT GGGGGGGACC CAAAACCCCC CAAAACCCCC AAGGTTGGGA AACAAAAACC
CCCCGGTGTT TTTGGCCCCT TTTTCCCCCC AAAAGCAAAA GGGGGCCCCA GGGGCCCCTT
TTTTTTCCCC AAAAAAAAAT TTTAAAAAAG GGGGGGTTCC CCCCCAAAAA AACCCCCCGG
GGAAAAAGAA AAAAATTGGG CCCCAATTTT CCCCCACAAG GGGACTTTCC CCCCTCCACA
AAAAATTTCC GCGGGGGGGA AAAACCAAAA ACTCCACCCC AAAAAAACAC CCTCTTTTTA
AAGAAAAAAA AAAATATCTC TTCTTTATAA TCCCCCCCGG GAAAGAAGCG CTTTTTCTTT
TTGGGAGAGG TTGTGTTTTT TCCCCCCCCC CCCCTCCCGG GGAAGAAAAG AAAGCTTCCC
TCCTCCGCGT GTAAAAACAA TAAAGGGGAA GAATATATTC TTTTCTTTAT AAAAAAAAAA
AAAA
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | carbonyl reductase 1 | 242 | 7e-81 | O | ||
CBR3 | carbonyl reductase 3 | 228 | 7e-60 | O | ||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 1e-08 | |||
LOC388963 | similar to short-chain dehydrogenase/reductase 1 | 58.2 | 1e-08 | |||
RDH14 | retinol dehydrogenase 14 (all-trans/9-cis/11-cis) | 57.8 | 2e-08 | |||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 55.8 | 6e-08 | O | ||
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 55.5 | 8e-08 | O | ||
RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 54.7 | 1e-07 | O | ||
DHRS4L2 | dehydrogenase/reductase (SDR family) member 4 like 2 | 52.4 | 7e-07 | O | ||
LOC654042 | similar to dehydrogenase/reductase (SDR family) member 4 like 2 | 52.4 | 7e-07 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Cbr3 | carbonyl reductase 3 | 231 | 9e-71 | O | ||
Cbr1 | carbonyl reductase 1 | 221 | 1e-72 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 216 | 2e-72 | O | ||
LOC435489 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 216 | 2e-72 | O | ||
LOC386400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) | 202 | 7e-68 | O | ||
Rdh13 | retinol dehydrogenase 13 (all-trans and 9-cis) | 63.5 | 4e-10 | O | ||
Rdh11 | retinol dehydrogenase 11 | 59.7 | 5e-09 | O | ||
Rdh14 | retinol dehydrogenase 14 (all-trans and 9-cis) | 58.9 | 9e-09 | |||
Rdh12 | retinol dehydrogenase 12 | 56.6 | 5e-08 | O | ||
Dhrsx | dehydrogenase/reductase (SDR family) X chromosome | 56.2 | 6e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC610164 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 241 | 3e-79 | O | ||
LOC487748 | similar to carbonyl reductase 3 | 236 | 3e-72 | |||
LOC480785 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 214 | 9e-68 | O | ||
LOC478411 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 206 | 1e-65 | O | ||
LOC475790 | similar to Retinol dehydrogenase 12 | 72.4 | 8e-13 | |||
LOC491173 | similar to retinol dehydrogenase 11 (predicted) | 58.5 | 1e-08 | O | ||
LOC490744 | similar to retinol dehydrogenase 12 (all-trans and 9-cis) | 58.2 | 1e-08 | O | ||
LOC611373 | similar to Retinol dehydrogenase 13 | 57.8 | 2e-08 | O | ||
LOC490616 | similar to dehydrogenase/reductase (SDR family) member 2 isoform 2 | 56.6 | 4e-08 | |||
LOC482983 | similar to retinol dehydrogenase 14 (all-trans and 9-cis) | 55.8 | 7e-08 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
MGC127133 | 20-beta-hydroxysteroid dehydrogenase-like | 236 | 6e-77 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 236 | 2e-62 | O | ||
CBR1 | carbonyl reductase 1 | 230 | 6e-76 | O | ||
LOC617400 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 223 | 2e-58 | O | ||
LOC613272 | similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) | 76.6 | 6e-31 | O | ||
LOC507942 | similar to retinol dehydrogenase 11 (predicted) | 65.5 | 7e-11 | |||
LOC516036 | similar to carbonyl reductase 3 | 63.2 | 4e-10 | O | ||
LOC516036 | similar to carbonyl reductase 3 | 63.2 | 4e-10 | O | ||
DSSDR2 | double substrate-specificity short chain dehydrogenase/reductase 2 | 60.1 | 3e-09 | O | ||
MGC139505 | similar to retinol dehydrogenase 11 (predicted) | 58.9 | 7e-09 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CBR1 | 20-beta-hydroxysteroid dehydrogenase | 283 | 3e-97 | O |
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