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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-063860

Length: 911

Sequence [FASTA format sequence]
GTGGAACXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XX
GCATGGCG GCGGGGGCGG CCGAGGCGGC GGCGGCTGTG
GTGGAGGTCG GCTCCGCCGG GCAGTTTGAG GAGCTGCTGC GCCTCAGAGC CAAGTCCCTG
CTGGTGGTCC ATATCTGGGC ACCATGGGCC CCACAGTGTG CTCAGATGAA CGATGTGATG
GCCGAGTTAG CCAAGGAGCA CCCGCAAGTT TCCTCTGTGA AGTTGGAGGC TGAAGCTGTT
CCTGAAGTGT CTGAAAAATA CGGAATTAGT TCTGTACCCA CCTTTCTGTT TTTCAAGATG
ACTTTTTACC TGCAGAATTC TCAGAGCATT GACCGGTTAG ATGGTGCACA TGCCCCAGAG
TTGACCAAAA AGGTTCAGCG ACATGCGTCC AGCAGCTCTT TCCCATCTGG CGGTAGCGAG
CACCTGAAAG AAGACCTCAG CCTTCGCCTG AAGAAGCTGA CCCACGCTGC CCCCTGCATG
CTGTTCATGA AGGGAACACC CCAGGAGCCG CGCTGCGGTT TCAGCAAGCA GATGGTGGAA
ATTCTTAACA AACATAATAT CCAGTTTAGC AGTTTTGGTA TCTTCTCAGA TGAAGAAGTT
CGCCAAGGCC TCAAAACCTA TTCCAATTGG CCCACCTACC CCCAGCTCTA TGTTTCTGGA
GAGCTCATAG GAGGACTTGA TATAATCAAG GAGCTAGAAG CATCTAAAGA ACTAGATACA
ATTTGCCCCA AAGCTCCCAA ATTAGAGGAA AGGCTCAAAG TACCTGACAA ATAAAGCTTC
TGTGATGCTC TTTATGAAGG GAAACAAACA GGAAGCCCAG TGTGGTTTCA CCAGACAAAT
CCTGGAAATT CTAAATAGTA CTGGTGTCTA CTACCAGACG TTCCGACTTA CTGAAGATGA
GGAAAACCGG CAGGATTGAA AACCTTCTCC CAC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTXNL2thioredoxin-like 2394e-110
Contig/Assembly ProteinGLRX5glutaredoxin 5 homolog (S. cerevisiae)93.62e-19O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTxnl2thioredoxin-like 2396e-110
Contig/Assembly ProteinLOC620016similar to thioredoxin-like 21724e-43
Contig/Assembly ProteinLOC620016similar to thioredoxin-like 21724e-43
Contig/Assembly ProteinLOC620016similar to thioredoxin-like 21724e-43
Contig/Assembly ProteinGlrx5glutaredoxin 5 homolog (S. cerevisiae)93.63e-19O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC477869similar to Thioredoxin-like 2 protein (PKC-interacting cousin of thioredoxin) (PKCq-interacting protein) (PKC-theta-interacting protein)395e-110O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTXNL2thioredoxin-like403e-112O
Contig/Assembly ProteinLOC616291similar to Thioredoxin-like protein 2 (PKC-interacting cousin of thioredoxin) (PKC-theta-interacting protein) (PKCq-interacting protein) (HUSSY-22)1747e-44O
Contig/Assembly ProteinLOC505935similar to CG14407-PA92.44e-19O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
UTR010034D05UTR01_0034_D05.bBP171173