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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-064517

Length: 1,084

Sequence [FASTA format sequence]
CGGTTTTTTT TTTGTTGGCC TAGTGXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXX
GG CTCCTCCCGC TTGCCGCCGC
AGTGACAGGG AAGCCGGGCC CGGTGGCAGA GAGGAAGTGC GGGGCCGCCG CGCCGAGCCC
GTCCCCGCCG AGGCCGGCTC CCCCAGGCGG CTCGGGTGAC AGTGTCGCGG CCGCCGGGCG
CAGCGCGGGG CACGCGCCGG GCAGAGCCAA GGGCCAGGCG GACGCTTCAG CAGAGACGCG
GGGAAAATGG CTGATGACTT TGGCTTCTTC TCGTCATCGG AGAGCGGGGC CCCTGAGGTT
GCCGAGGAGG ACCCGGCGGC TGCCTTCCTG GCCCAGCAGG AGAGTGAAAT CGCCGGCAGC
CGGGACCAGC GAGTGGGGCA GGTCCTGAGG ACATGGGGAC CACAGTCAAT GGAGATGTGT
TTCAGGATGC TAACGGTCCA GCTGATGGCT ACGCTGCCAT TGCCCAGGCG GACAGACTGA
CTCAGGAACC CGAGAGCATC CGCAAGTGGA GAGAGGAGCA GCGGAAACGG CTGCAAGAGC
TGGATGCTGC CTCCAAAGTG ACGGAACAAG AGTGGCGGGA GAAGGCCAAG AAGGACTTGG
AGGAATGGAA CCAGCGCCAG AGTGAGCAAG TTGAGAAGAA CAAGATCAAT AACCGGGCAT
CCGAGGAGGC TTTTGTGAAG GAATCCAAGG AGGAGACCCC AGGTACAGAG TGGGAGAAGG
TGGCCCAGCT GTGTGACTTC AACCCCAAGA GCAGCAAGCA ATGCAAAGAC GTGTCCCGCC
TGCGCTCGGT GCTCATGTCC CTGAAGCAGA CACCACTGTC CCGCTAGGAA CCTGTCACCA
GCATGGCCGC CAAGCGGGGG CAGGGCCGGG CAAAGTAGGA ACAGCTGCTT CGGGCAGGGG
GGGGGAAAAC CCCTCCTGGG GCTGCTACAA AGCCTATCCC GTTCCTCCCC ATCTCCCAGG
GCTGGAAAGA AGGGAGTTTT CCCCCCTCTC CGCCCCTTCC CTCCCTCTAA GCCCCTTTTG
GGCCCCACCC CCCTCAAATT GTCCCTCCTT CGTCCACAAA AATTTGACTG GTCCCCTCCG
GGAGGGTTTT TTTTTTTTTT TTTTTTTTTG GCTTTTAAAG GGGC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCLTBclathrin, light polypeptide (Lcb)3103e-86O
Contig/Assembly ProteinCLTBclathrin, light polypeptide (Lcb)2997e-83O
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)2063e-53O
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)1902e-48O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCltbclathrin, light polypeptide (Lcb)3056e-84O
Contig/Assembly ProteinCltaclathrin, light polypeptide (Lca)1958e-50O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a3105e-86O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a3007e-83O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a2991e-82O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a2965e-82O
Contig/Assembly ProteinLOC489104similar to clathrin, light polypeptide isoform a2921e-80O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a2024e-52O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1925e-49O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1925e-49O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1918e-49O
Contig/Assembly ProteinLOC474765similar to clathrin, light polypeptide A isoform a1872e-47O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCLTLBclathrin, light polypeptide B (light chain B)3012e-83O
Contig/Assembly ProteinCLTAclathrin, light polypeptide (Lca)1874e-49O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
UTR010058A12UTR01_0058_A12.bBP462940