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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20070806S-058423

Length: 561

Sequence [FASTA format sequence]
CAATTGACXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XX
CCTGCCCG CCGGACCTGC AAACTTGTGC CACCGGCTCT GCCTGTCCCC AGGGAGCCCG
AGCGTCCGCG GCCCTCGCCC CTCCCGCCCG TCACCAGCCA TGGGCTGCTT CGAGTGCTGC
ATCAAGTGTC TGGGAGGAGT CCCCTACGCC TCCCTGGTGG CCACCATCCT CTGCTTCTCG
GGGGTGGCCT TGTTCTGCGG CTGTGGGCAT GTGGCCCTGG CGGGCACCGT GGCCATCCTG
GAGCAGCACT TCTCCACCAA CACCTGTTAC CATGCCCTGC TGAGCGAGGT AATCCAACTG
ATGCAGTACG TCATCTACGG CATCGCGTCC TTCTTCTTCT TGTACGGGAT CATCCTGTTG
GCAGAGGGCT TCTACACCAC CAGCGCAGTC AAGGAGCTGC ACGGCGAGTT TAAGACAACC
GCCTGTGGCC GCTGCATCAG CGGGATGTTT GTCTTCCTCA CCTACGTGCT GGGAGTGGCC
TGGCTGGGCG TGTTCAGTTT CTCCGCGGTG CCNGTGCTCA TGTTCTACAA CATACGGTCC
ACCCGTCAAG CTTTGAGGCC CCCTTTATCA TCTGTACANC CGGTCTGCAT TAGATCTGTT
TGCACTTCCG CCGTACGGTA TTTCCTCTGT AACGCCTCTT CCGTACATTT GTGGCTCTGC
CCGGTATATA CCCTGGATAC GTAGCAGTTT ACACGTCATA TCACGGTTTC GTTGGGTNCG
GCGTAACTCG GCCCATTGCA TNTCCCGATC TACTTTTGAG TA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGPM6Bneuronal membrane glycoprotein M6-b isoform 4 [Homo sapiens]. 2921e-79O
Contig/Assembly ProteinGPM6Bneuronal membrane glycoprotein M6-b isoform 1 [Homo sapiens]. 2906e-79
Contig/Assembly ProteinGPM6Bneuronal membrane glycoprotein M6-b isoform 2 [Homo sapiens]. 2906e-79
Contig/Assembly ProteinGPM6Bneuronal membrane glycoprotein M6-b isoform 3 [Homo sapiens]. 2906e-79O
Contig/Assembly ProteinGPM6Aneuronal membrane glycoprotein M6-a isoform 3 [Homo sapiens]. 1945e-50O
Contig/Assembly ProteinGPM6Aneuronal membrane glycoprotein M6-a isoform 2 [Homo sapiens]. 1922e-49O
Contig/Assembly ProteinGPM6Aneuronal membrane glycoprotein M6-a isoform 1 [Homo sapiens]. 1922e-49O
Contig/Assembly ProteinPLP1myelin proteolipid protein isoform 2 [Homo sapiens]. 1843e-47O
Contig/Assembly ProteinPLP1myelin proteolipid protein isoform 1 [Homo sapiens]. 1677e-42O
Contig/Assembly ProteinPLP1myelin proteolipid protein isoform 1 [Homo sapiens]. 1677e-42O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 4 [Mus musculus]. 2943e-80O
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 6 [Mus musculus]. 2943e-80O
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 6 [Mus musculus]. 2943e-80O
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 3 [Mus musculus]. 2921e-79O
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 1 [Mus musculus]. 2921e-79
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 5 [Mus musculus]. 2921e-79O
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 2 [Mus musculus]. 2921e-79
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 5 [Mus musculus]. 2921e-79O
Contig/Assembly ProteinGpm6bneuronal membrane glycoprotein M6-b isoform 2 [Mus musculus]. 2921e-79
Contig/Assembly ProteinGpm6aneuronal membrane glycoprotein M6-a [Mus musculus]. 1921e-49O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC480842PREDICTED: similar to glycoprotein M6B isoform 2 [Canis familiaris]. 2906e-79
Contig/Assembly ProteinLOC475641PREDICTED: similar to glycoprotein M6A isoform 1 isoform 6 [Canis familiaris]. 1953e-50O
Contig/Assembly ProteinLOC475641PREDICTED: similar to glycoprotein M6A isoform 1 isoform 5 [Canis familiaris]. 1921e-49O
Contig/Assembly ProteinLOC475641PREDICTED: similar to glycoprotein M6A isoform 1 isoform 4 [Canis familiaris]. 1922e-49O
Contig/Assembly ProteinLOC475641PREDICTED: similar to glycoprotein M6A isoform 1 isoform 3 [Canis familiaris]. 1922e-49O
Contig/Assembly ProteinLOC475641PREDICTED: similar to glycoprotein M6A isoform 1 isoform 2 [Canis familiaris]. 1922e-49O
Contig/Assembly ProteinLOC475641PREDICTED: similar to glycoprotein M6A isoform 1 isoform 1 [Canis familiaris]. 1922e-49O
Contig/Assembly ProteinPLP1myelin proteolipid protein [Canis lupus familiaris]. 1661e-41O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGPM6Bneuronal membrane glycoprotein M6-b [Bos taurus]. 2921e-79O
Contig/Assembly ProteinGPM6Aneuronal membrane glycoprotein M6-a [Bos taurus]. 1922e-49O
Contig/Assembly ProteinPLP1myelin proteolipid protein [Bos taurus]. 1677e-42O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100155237PREDICTED: neuronal membrane glycoprotein M6-b isoform 1 [Sus scrofa]. 2963e-81
Contig/Assembly ProteinLOC100511106PREDICTED: neuronal membrane glycoprotein M6-a-like isoform 1 [Sus scrofa]. 1942e-50O
Contig/Assembly ProteinLOC100511106PREDICTED: neuronal membrane glycoprotein M6-a-like isoform 2 [Sus scrofa]. 1926e-50O
Contig/Assembly ProteinPLP1myelin proteolipid protein [Sus scrofa]. 1674e-42O


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
OVRM10114A04OVRM1_0114_A04.bBP145232 AK235772