Assembly Overview: TOP
BLAST on RefSeq (Human): TOP
BLAST on RefSeq (Mouse): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Dog): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Cattle): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Pig): TOP
| | Locus | Definition | Score | E value | FL |
---|
Alignment: TOP
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
MLN01_0050_C02.b : nntttggtagtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0069_E03.b : nagtgxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b :
20080515C-005149 : ....................TTTGGTTTGGCCAAAAAGTACAGAGACAACAGGACAAGGC
---------+---------+---------+---------+---------+---------+ 40
MLN01_0050_C02.b : xxxxxxxxxxxxxxxxxxxxTTTGGTTTGGCCAAAAAGTACAGAGACAACAGGACAAGGC
PBL01_0069_E03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTTGGCCAAAAAGTACAGAGACAACAGGACAAGGC
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b :
20080515C-005149 : AACACATACCATACAGAGAAGATAAAAATCTCACTGGCACTGCCCGATACGCTAGCATCA
---------+---------+---------+---------+---------+---------+ 100
MLN01_0050_C02.b : AACACATACCATACAGAGAAGATAAAAATCTCACTGGCACTGCCCGATACGCTAGCATCA
PBL01_0069_E03.b : AACACATACCATACAGAGAAGATAGAAATCTCACTGGCACTGCCCGATACGCTAGCATCA
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b :
20080515C-005149 : ATGCACATCTTGGTATTGAACAGAGTCGCCGAGATGACATGGAATCATTAGGATATGTTT
---------+---------+---------+---------+---------+---------+ 160
MLN01_0050_C02.b : ATGCACATCTTGGTATTGAACAGAGTCGCCGAGATGACATGGAATCATTAGGATATGTTT
PBL01_0069_E03.b : ATGCACATCTTGGTATTGAACAGAGTCGCCGAGATGACATGGAATCATTAGGATATGTTT
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b :
20080515C-005149 : TGATGTATTTTAATAGAACCAGTCTGCCATGGCAAGGACTCAAGGCTGCAACAAAGAAGC
---------+---------+---------+---------+---------+---------+ 220
MLN01_0050_C02.b : TGATGTATTTTAATAGAACCAGTCTGCCATGGCAAGGACTCAAGGCTGCAACAAAGAAGC
PBL01_0069_E03.b : TGATGTATTTTAATAGAACCAGTCTGCCATGGCAAGGACTCAAGGCTGCAACAAAGAAGC
OVRM1_0209_G10.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0186_E06.b :
BKFL1_0008_G12.b :
20080515C-005149 : AGAAATATGAAAAAATTAGCGAAAAGAAGATGTCCACACCTGTGGAAGTTTTGTGTAAGG
---------+---------+---------+---------+---------+---------+ 280
MLN01_0050_C02.b : AGAAATATGAAAAAATTAGCGAAAAGAAGATGTCCACACCTGTGGAAGTTTTGTGTAAGG
PBL01_0069_E03.b : AAAAATATGAAAAAATTAGCGAAAAGAAGATGTCCACACCTGTGGAAGTTTTGTGTAAGG
OVRM1_0209_G10.b : xxxxxxxxxxxxxxxTTAGCGAAAAGAAGATGTCCACACCTGTGGAAGTTTTGTGTAAGG
OVRM1_0186_E06.b : nagttgtcxx
BKFL1_0008_G12.b :
20080515C-005149 : GGTTTCCTGCAGAATTTGCCATGTACTTAAACTATTGTCGTGGGCTGCGCTTTGAGGAAG
---------+---------+---------+---------+---------+---------+ 340
MLN01_0050_C02.b : GGTTTCCTGCAGAATTTGCCATGTACTTAAACTATTGTCGTGGGCTGCGCTTTGAGGAAG
PBL01_0069_E03.b : GGTTTCCTGCAGAATTTGCCATGTACTTAAACTATTGTCGTGGGCTGCGCTTTGAGGAAG
OVRM1_0209_G10.b : GGTTTCCTGCAGAATTTGCCATGTACTTAAACTATTGTCGTGGGCTGCGCTTTGAGGAAG
OVRM1_0186_E06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTTGAGGAAG
BKFL1_0008_G12.b :
20080515C-005149 : CCCCGGATTACATGTACCTGAGACAGCTATTCCGCATTCTTTTCAGGACCCTGAATCACC
---------+---------+---------+---------+---------+---------+ 400
MLN01_0050_C02.b : CCCCGGATTACATGTACCTGAGACAGCTATTCCGCATTCTTTTCAGGACCCTGAATCACC
PBL01_0069_E03.b : CCCCGGATTACATGTACCTGAGACAGCTATTCCGCATTCTTTTCAGGACCCTGAATCACC
OVRM1_0209_G10.b : CCCCGGATTACATGTACCTGAGACAGCTATTCCGCATTCTTTTCAGGACCCTGAATCACC
OVRM1_0186_E06.b : CCCCGGATTACATGTACCTGAGACAGCTATTCCGCATTCTTTTCAGGACCCTGAATCACC
BKFL1_0008_G12.b :
20080515C-005149 : AATATGACTACACATTTGACTGGACAATGTTAAAGCAGAAAGCAGCACAGCAAGCAGCCT
---------+---------+---------+---------+---------+---------+ 460
MLN01_0050_C02.b : AATATGACTACACATTTGACTGGACAATGTTAAAGCAGAAAGCAGCACAGCAAGCAGCCT
PBL01_0069_E03.b : AATATGACTACACATTTGACTGGACAATGTTAAAGCAGAAAGCAGCACAGCAAGCAGCCT
OVRM1_0209_G10.b : AATATGACTACACATTTGACTGGACAATGTTAAAGCAGAAAGCAGCACAGCAAGCAGCCT
OVRM1_0186_E06.b : AATATGACTACACATTTGACTGGACAATGTTAAAGCAGAAAGCAGCACAGCAAGCAGCCT
BKFL1_0008_G12.b : nnnnnnn
20080515C-005149 : CTTCAAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGTTTCTAAGCATGAATCGAGG
---------+---------+---------+---------+---------+---------+ 520
MLN01_0050_C02.b : CTTCAAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGTTTCTAAGCATGAATCGAGG
PBL01_0069_E03.b : CTTCAAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGTTTCTAAGCATGAATCGAGG
OVRM1_0209_G10.b : CTTCAAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGTTTCTAAGCATGAATCGAGG
OVRM1_0186_E06.b : CTTCAAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGTTTCTAAGCATGAATCGAGG
BKFL1_0008_G12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxxxxx
20080515C-005149 : AACAGAAGCAGCAGAGCAGATGATCGGAGCAGCATTTGTTTCTCCCCAAATCTAGACATT
---------+---------+---------+---------+---------+---------+ 580
MLN01_0050_C02.b : AACAGAAGCAGCAGAGCAGATGATCGGAGCAGCATTTGTTTCTCCCCAAATCTAGACATT
PBL01_0069_E03.b : AACAGAAGCAGCAGAGCAGATGATCGGAGCAGCATTTGTTTCTCCCCAAATCTAGACATT
OVRM1_0209_G10.b : AACAGAAGCAGCAGAGCAGATGTTCGGAGCAGCATTTGTTTCTCCCCAAATCTAGACATT
OVRM1_0186_E06.b : AACAGAAGCAGCAGAGCAGATGATCGGAGCAGCATTTGTTTCTCCCCAAATCTAGACATT
BKFL1_0008_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20080515C-005149 : TTAGTTCATATGTACACTAGCCAGTGGCTGTGGACAACCATTTCCTTGGTGTAAAGAACT
---------+---------+---------+---------+---------+---------+ 640
MLN01_0050_C02.b : TTAGTTCATATGTACACTAGCCAGTGGCTGTGGACAACCATTTCCTTGGTGTAAAGAACT
PBL01_0069_E03.b : TTAGTTCATATGTACACTAGCCAGTGGCTGTGGACAACCATTTCCTTGGTGTAAAGAACT
OVRM1_0209_G10.b : TTAGTTCATATGTACACTAGCCAGTGGCTGTGGACAACCATTTCCTTGGTGTAAAGAACT
OVRM1_0186_E06.b : TTAGTTCATATGTACACTAGCCAGTGGCTGTGGACAACCATTTCCTTGGTGTAAAGAACT
BKFL1_0008_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGGTGTAAAGAACT
20080515C-005149 : TCATTTCGGTATAAACTGGCTCTGGGCAGCACTGGCGATACTGCGTCCCGAGTTGTAGCC
---------+---------+---------+---------+---------+---------+ 700
MLN01_0050_C02.b : TCATTTCGGTATAAACTGGCTCTGGGCAGCGCTGGCGATACTGCGTCCCGAGTTGTAGCC
PBL01_0069_E03.b : TCATTTCGGTATAAACTGGCTCTGGGCAGCACTGGCGATACTGCGTCCCGAGTTGTAGCC
OVRM1_0209_G10.b : TCATTTCGGTATAAACTGGCTCTGGGCAGCACTGGCGATACTGCGTCCCGAGTTGTAGCC
OVRM1_0186_E06.b : TCATTTCGGTATAAACTGGCTCTGGGCAGCACTGGCGATACTGCGTCCCGAGTTGTAGCC
BKFL1_0008_G12.b : TCATTTCGGTATAAACTGGCTCTGGGCAGCACTGGCGATACTGCGTCCCGAGTTGTAGCC
20080515C-005149 : GCTGTAATTGTGAATATTAACTGAGATAGTGAGACATGGTGTCCAGTTTTCTATTGCATT
---------+---------+---------+---------+---------+---------+ 760
MLN01_0050_C02.b : GCTGTAATTGTGAATATTAACTGAGATAGTGAGACATGGTGTCCAGTTTTCTATTGCATT
PBL01_0069_E03.b : GCTGTAATTGTGAATATTAACTGAGATAGTGAGACATGGTGTCCAGTTTTCTATTGCATT
OVRM1_0209_G10.b : GCTGTAATTGTGAATATTAACTGAGATAGTGAGACATGGTGTCCAGTTTTCTATTGCATT
OVRM1_0186_E06.b : GCTGTAATTGTGAATATTAACTGAGATAGTGAGACATGGTGTCCAGTTTTCTATTGCATT
BKFL1_0008_G12.b : GCTGTAATTGTGAATATTAACTGAGATAGTGAGACATGGTGTCCAGTTTTCTATTGCATT
20080515C-005149 : TTTTCAAGTGGAAAAGTTAACTGAGTGGTTGACACACACAAATTGGTGGACAGATTGTGC
---------+---------+---------+---------+---------+---------+ 820
MLN01_0050_C02.b : TTTTCAAGTGGAAAAGTTAACTGAGTGGTTGACACACACAAATTGGTGGACGGATTGTGC
PBL01_0069_E03.b : TTTTCAAGTGGAAAAGTTAACTGAGTGGTTGACACACACAAATTGGTGGACAGATTGTGC
OVRM1_0209_G10.b : TTTTCAAGTGGAAAAGTTAACTGAGTGGTTGACACACACAAATTGGTGGACAGATTGTGC
OVRM1_0186_E06.b : TTTTCAAGTGGAAAAGTTAACTGAGTGGTTGACACACACAAATTGGTGGACAGATTGTGC
BKFL1_0008_G12.b : TTTTCAAGTGGAAAAGTTAACTGAGTGGTTGACACACACAAATTGGTGGACAGATTGTGC
20080515C-005149 : ATATGCCAATTGTTTTGTTAAAACCTTTTCTTTTGAACTATACTGCTTTGAGATCTCACT
---------+---------+---------+---------+---------+---------+ 880
MLN01_0050_C02.b : ATATGCCAATTGTTTTGTTGAAACCTTTTCTTTTG*ACTATACTGCTTTGAGATCTCACT
PBL01_0069_E03.b : ATATGCCCAATGTTTTGTTAAAACCTTTTCTTTTG*ACTATACTGCTTTGAGATCTCACT
OVRM1_0209_G10.b : ATATGCCAATTGTTTTGTTAAAACCTTTTCTTTTGAACTATACTGCTTTGAGATCTCACT
OVRM1_0186_E06.b : ATATGCCAATTGTTTTGTTAAAACCTTTTCTTTTGAACTATACTGCTTTGAGATCTCACT
BKFL1_0008_G12.b : ATATGCCAATTGTTTTGTTAAAACCTTTTCTTTTGAACTATACTGCTTTGAGATCTCACT
20080515C-005149 : TCAGAAGAACGGCATGAACAGTCTTCAGCCGCAGTTGTGATGGTTGTAAATGCTCGCAGC
---------+---------+---------+---------+---------+---------+ 940
MLN01_0050_C02.b : TCAGAAGAACGGCATGAACAGTCTTCAGCCGCAGTTGTGATGGTTGTNAATGCTCGCAGC
PBL01_0069_E03.b : TCAGAAGAACGGCATGAACAGTCTTCAGCCGCAGTTGTGATGGGTGTAAATGCTCGCAGC
OVRM1_0209_G10.b : TCAGAAGAACGGCATGAACAGTCTTCAGCCGCAGTTGTGATGGTTGNTAATGCTCGCAGC
OVRM1_0186_E06.b : TCAGAAGAACGGCATGAACAGTCTTCAGCCGCAGTTGTGATGGTTGTAAATGCTCGCAGC
BKFL1_0008_G12.b : TCAGAAGAACGGCATGAACAGTCTTCAGCCGCAGTTGTGATGGTTGTAAATGCTCGCAGC
20080515C-005149 : TGTGCGTTCTTAGGGTTTCTTCATCCCTGGGGTTTGCAAGTTGTTCACTTAAAACATTCT
---------+---------+---------+---------+---------+---------+ 1000
MLN01_0050_C02.b : TGTGCGTTCTTAGGGTTTCTTCATCCCTGGGGTTTGCAAGT*GTTCACTT*AAACATTCT
PBL01_0069_E03.b : TGTGCGTTTCTAGGGTTTCCTCCATCCTGGGGGTTGCAAGTTGTCCACTA*AAACATTCT
OVRM1_0209_G10.b : TGTGCGTTCTTAGGGTTTCTTCATCCCTGGGGTTTGCNAGTTGTTCACTTNAAACATTCT
OVRM1_0186_E06.b : TGTGCGTTCTTAGGGTTTCTTCATCCCTGGGGTTTGCAAGTTGTTCNACTTAAACATTCT
BKFL1_0008_G12.b : TGTGCGTTCTTAGGGTTTCTTCATCCCTGGGGTTTGCAAGTTGTTCACTTAAAACATTCT
20080515C-005149 : TAACATGGTTGGCTTCTTGTGTGCAAGCCAGCTGATATGGTAGCAACCAAAGATTCCAGT
---------+---------+---------+---------+---------+---------+ 1060
MLN01_0050_C02.b : TAcatggtgggcttctgtgtgcaagcacctgataggtaccaaccaaaattccgtggttaa
PBL01_0069_E03.b : TAcctggttggctcttgtgtgcagcccactgatatggtaccaaccaagatccagtgttta
OVRM1_0209_G10.b : TAA
OVRM1_0186_E06.b : TAACATGGTTGGCTTCTTGTGTGNCAGCCAGCTGATATGGTAGCAACCAAAGATTCCAGT
BKFL1_0008_G12.b : TAACATGGTTGGCTTCTTGTGTGCAAGCCAGCTGATATGGTAGCAACCAAAGATTCCAGT
20080515C-005149 : GTTTGAGCATATGAAAGACTCTGCCTGCTTACCTGTGCTAGAAATAACAGCATCTAAAGT
---------+---------+---------+---------+---------+---------+ 1120
MLN01_0050_C02.b : ccaatgaaaactcgcctgcttccgtgcttgaataaccctccaaatgaaatttaaaaaatt
PBL01_0069_E03.b : gcatatgaagacttcgctgctacctgtgctgaaatacccccctaagtgagcactagaaaa
OVRM1_0209_G10.b :
OVRM1_0186_E06.b : GTTTGAGCATATGAAAGACTCTGCCTGCTTACCTGTGCTAGAA
BKFL1_0008_G12.b : GTTTGAGCATATGAAAGACTCTGCCTGCTTACCTGTGCTAGAAATAACAGCATCTAAAGT
20080515C-005149 : GAAGACTTAAGAAAAACTTAGTGACTACTAGATTATCCGTAGGACTCTGCATTAACTCTA
---------+---------+---------+---------+---------+---------+ 1180
MLN01_0050_C02.b : ttggcaccaattatccgagacccgcttaccttaaggtctggttaaaaaaccatttcccaa
PBL01_0069_E03.b : cttaggacaccaaatatccgcagacccgctaacctcaatgtcctgggataaaaagcaatt
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : GAAGACTTAAGAAAAACTTAGTGACTACTAGATTATCCGTAGGACTCTGCATTAACTCTA
20080515C-005149 : TAAATGTCTTGGTATTAAAAAAAGCATATTTGTCACAGAAATTTAGTTAACATCTTANCA
---------+---------+---------+---------+---------+---------+ 1240
MLN01_0050_C02.b : attttaatctcaccaacaggtgtttgtctaaaagacccgacacctatatgggttgttttt
PBL01_0069_E03.b : gccccaaattagtaactcctcccgaaccggggaggtgcctaaaaagacccggaaccccaa
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : TAAATGTCTTGGTATTAAAAAAAGCATATTTGTCACAGAAATTTAGTTAACATCTTANCA
20080515C-005149 : CTGAACATGTGTGTATGTTGCTTAGATAAATGTAATCACTGTAAACATCTATATGGTCTG
---------+---------+---------+---------+---------+---------+ 1300
MLN01_0050_C02.b : taaagaactttttcattt
PBL01_0069_E03.b : aaaaaaaaaaaaaaaaaaaggccttggtccatcgggcgccccctgaatctcggggccatc
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : CTGAACATGTGTGTATGTTGCTTAGATAAATGTAATCACTGTAAACATCTATATGGTCTG
20080515C-005149 : GGATTTTTGTTTTATTTTGGAATGGGAGCTCTTTTTTGTTTACNAGTTCATTAAAAACTT
---------+---------+---------+---------+---------+---------+ 1360
MLN01_0050_C02.b :
PBL01_0069_E03.b : cccccctttgaaaggcctaggatataaaagcgccccttacccggggaattcgatttaaac
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : GGATTTTTGTTTTATTTTGGAATGGGAGCTCTTTTTTGTTTACNAGTTCATTAAAAACTT
20080515C-005149 : GAAA........................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b : tttggaaagcacccccaaccaaaatattggccccgccgttggttaaaaaccacttttttc
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : GAAAactgttctgtaaggaaatgagatttttttaaaaacaaaaaaatgccttgctgactc
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b : ccccccccccgcc
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : actatgaatcaaaatctcccccatttttacaagactattccaagcattggttaggaaata
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b :
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : tcccttgccaatcattttaaatttagtacaagaacttcccaatgttttaattaaaaattt
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b :
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : ttttccctgaaacgaaagcattctaaccttttccttttttaagaattgcagggcaatccc
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b :
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : cctgctgtacccccaggcccgaaattgtattgtaacccggacccctaaaaaaaactggca
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b :
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : tattttaaaaaaaagaacttaagggttaataaaaaagacctttttaaacccgcgcatggc
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b :
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : cagaggggcaccccaaatttaaacccccccccccgggggttggagcgccccccggcgccc
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b :
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : tcccacaccaagggcctcctttcccccaaaaaaaaaaatttttgttttctttttggccca
20080515C-005149 : ............................................................
---------+---------+---------+---------+---------+---------+ 1364
MLN01_0050_C02.b :
PBL01_0069_E03.b :
OVRM1_0209_G10.b :
OVRM1_0186_E06.b :
BKFL1_0008_G12.b : aaaaaatttggag