Assembly Overview: TOP
BLAST on RefSeq (Human): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Mouse): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Dog): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Cattle): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Pig): TOP
| | Locus | Definition | Score | E value | FL |
---|
Alignment: TOP
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRM1_0082_H02.b : acgttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
HTMT1_0149_D11.b : ttttacgaagtagaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0061_G05.b : agttgtcxxxxxxxxxxxxxxxxxx
PTG01_0102_E03.b : ngcctttnnnnttttgataaagcag
UTR01_0058_F08.b : cctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20101001C-007140 : GAGACCTGGCAGGGATTTGGGACGCTGGACAGGCAGTTTCTTCACGTAGCCAGAGTGCGA
---------+---------+---------+---------+---------+---------+ 60
OVRM1_0082_H02.b : GAGACCTGGCAGGGATTTGGGACGCTGGACAGGCAGTTTCTTCACGTAGCCAGAGTGCGA
HTMT1_0149_D11.b : xxxxxxxxxgAGGGATTTGCGACGCTGGACAGGCAGTTTCTTCACGTAGCCAGAGTGCGA
OVRM1_0061_G05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTTCTTCACGTAGCCCGAGTGCGA
PTG01_0102_E03.b : cxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGTAGCCAGAGTGCGA
UTR01_0058_F08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTAGCCAGAGTGCGA
20101001C-007140 : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
---------+---------+---------+---------+---------+---------+ 119
OVRM1_0082_H02.b : ACGTGGGGTGCAAAACGGAGTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
HTMT1_0149_D11.b : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
OVRM1_0061_G05.b : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
PTG01_0102_E03.b : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
UTR01_0058_F08.b : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
20101001C-007140 : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
---------+---------+---------+---------+---------+---------+ 179
OVRM1_0082_H02.b : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
HTMT1_0149_D11.b : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
OVRM1_0061_G05.b : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
PTG01_0102_E03.b : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
UTR01_0058_F08.b : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
20101001C-007140 : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
---------+---------+---------+---------+---------+---------+ 239
OVRM1_0082_H02.b : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
HTMT1_0149_D11.b : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
OVRM1_0061_G05.b : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
PTG01_0102_E03.b : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
UTR01_0058_F08.b : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
20101001C-007140 : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
---------+---------+---------+---------+---------+---------+ 299
OVRM1_0082_H02.b : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
HTMT1_0149_D11.b : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
OVRM1_0061_G05.b : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
PTG01_0102_E03.b : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
UTR01_0058_F08.b : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
20101001C-007140 : AGGCTCGTTTCTGGCATGATGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
---------+---------+---------+---------+---------+---------+ 359
OVRM1_0082_H02.b : AGGCTCGTTTCTGGCATGATGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
HTMT1_0149_D11.b : AGGCTCGTTTCTGGCATGATGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
OVRM1_0061_G05.b : AGGCTCGTTTCTGGCATGATGGCGCANAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
PTG01_0102_E03.b : AGGCTCGTTTCTGGCATGGTGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
UTR01_0058_F08.b : AGGCTCGTTTCTGGCATGATGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
20101001C-007140 : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
---------+---------+---------+---------+---------+---------+ 419
OVRM1_0082_H02.b : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
HTMT1_0149_D11.b : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
OVRM1_0061_G05.b : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
PTG01_0102_E03.b : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
UTR01_0058_F08.b : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
20101001C-007140 : CGTGTGAACAATAAGATTCGAGAGCTGCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
---------+---------+---------+---------+---------+---------+ 479
OVRM1_0082_H02.b : CGTGTGAACAATAAGATTCGAGAGCTGCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
HTMT1_0149_D11.b : CGTGTGAACAATAAGATTCGAGAGCTGCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
OVRM1_0061_G05.b : CGTGTGAACAATAAGATTCGAGAGCTGCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
PTG01_0102_E03.b : CGCGTGAACAATAAGATTCGAGAGCTTCTTCAGCAAATGGAGAGAGGCCTANNATCAGCA
UTR01_0058_F08.b : CGCGTGAACAATAAGATTCGAGAGCTTCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
20101001C-007140 : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
---------+---------+---------+---------+---------+---------+ 539
OVRM1_0082_H02.b : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
HTMT1_0149_D11.b : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
OVRM1_0061_G05.b : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
PTG01_0102_E03.b : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
UTR01_0058_F08.b : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
20101001C-007140 : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAA
---------+---------+---------+---------+---------+---------+ 599
OVRM1_0082_H02.b : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAN
HTMT1_0149_D11.b : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAA
OVRM1_0061_G05.b : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAN
PTG01_0102_E03.b : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAA
UTR01_0058_F08.b : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAA
20101001C-007140 : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
---------+---------+---------+---------+---------+---------+ 659
OVRM1_0082_H02.b : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
HTMT1_0149_D11.b : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
OVRM1_0061_G05.b : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
PTG01_0102_E03.b : AGTCTGAACTGTTTGACCAAGCGTTCCATCACTTTCCGGTGGGGTGATGCGGGCCCCCTG
UTR01_0058_F08.b : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
20101001C-007140 : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCAGGCAGAAGACTGTATC
---------+---------+---------+---------+---------+---------+ 719
OVRM1_0082_H02.b : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCCAGCAGAAGACTGTATC
HTMT1_0149_D11.b : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAACAGGCAGAAGACTGTATC
OVRM1_0061_G05.b : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCAGGCAGAAGACTGTATC
PTG01_0102_E03.b : GCAATGGCTGCTGgtgtgcttgaccaaattaaccatgaaaagccgggcaaaaaactgttt
UTR01_0058_F08.b : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCAGGCAGAAGACTGTATC
20101001C-007140 : ACCCGGCTAATTCACCTAAATAAGATTGACCCGCATGCTCCAAATGAAATGCTGTATGGA
---------+---------+---------+---------+---------+---------+ 779
OVRM1_0082_H02.b : ACC
HTMT1_0149_D11.b : ACCCGGCTAATTCACCTAAATAAGATTGACCCGCATGCTCCCAATGAAATGCTGTATGGA
OVRM1_0061_G05.b : ACCCGGCTAATTCACCTNAATNAGATTGACCCGCATGCTCCAAATGAAATGCTGTATGGA
PTG01_0102_E03.b : cccccggcttaattcccctaaataaaattgaccccccaggccccaaattaaaagcttgtt
UTR01_0058_F08.b : ACCCGGCTAATTCACCTAAATAAGATTGACCCGCATGCTCCAAATGAAATGCTGTATGGA
20101001C-007140 : CGAATGGGCTACATCTATGCTCTTCTCTTTGTGAATAAGAACTTTGGAGTAGAAAAGATT
---------+---------+---------+---------+---------+---------+ 839
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : CGAATGGGCTACATCTATGCTCTTCTCTTTGTGAATAGAACTTTGGGAGTAGAAAAGATT
OVRM1_0061_G05.b : CGAATGGGCTACATCTATGCTCT
PTG01_0102_E03.b : ggaacaaaaggggccacactcctggccctccccttttgggaaaaaaaactttgggaataa
UTR01_0058_F08.b : CGAATGGGCTACATCTATGCTCTTCTCTTTGTGAATAAGAACTTTGGAGTAGAAAAGATT
20101001C-007140 : CCTCGAAGCCATATTCAGCAAATTTGTGAAACAATCCTTACCTCTGGAGAAAACCTAGCT
---------+---------+---------+---------+---------+---------+ 899
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : CCTCGAAGCCATATTCAACAAATTTGTGAAAACATCCTTACCTCCTGAAAAAACCTACCT
OVRM1_0061_G05.b :
PTG01_0102_E03.b : aaaaaaattcccccaaacccttttttcccaaattttggaaacaactttttccctcgtgga
UTR01_0058_F08.b : CCTCGAAGCCATATTCAGCAGATTTGTGAAACAGTCTTAACCTCTGGAGAAAACCTAGCT
20101001C-007140 : AGAAAAAAAAACTTCCAGAAAAAACTCCCCTGATGTATGAAGGGAACAAAAAAATTATGT
---------+---------+---------+---------+---------+---------+ 959
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : AGAAAAAaaacttcacgaaaaaatcccctgatggttgaatggtaccagaaattttggggg
OVRM1_0061_G05.b :
PTG01_0102_E03.b : aaaaccctcctttaaaaaaaaaattttcccaaaaaaaaccccccctgtgtgttagagggg
UTR01_0058_F08.b : AGAAAAAAAAACTTCCAGAAAAAACTCCCCTGATGTATGAAGGGAACAAAAAAATTATGT
20101001C-007140 : GGGGGCTGCTCTGGGCCTGGCAGGAATTTATTACTACCTGA...................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : gccgcccatgcctggcaggaatttttactacgggatcacccaaccttcaatgagccggcg
OVRM1_0061_G05.b :
PTG01_0102_E03.b : gccccaaaatttttttggggggggcccctcgggccgccgcgaaatttttttttcccttgg
UTR01_0058_F08.b : GGGGGCTGCTCTGGGCCTGGCAGGAATTTATTACTACCTGAatgcaccccaccctccagt
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : aattccaaatttggccaacccagttaaatttgtttgccacttaattccctcaggaataac
OVRM1_0061_G05.b :
PTG01_0102_E03.b : ggggccccccccccctttggggggccgggggaaatttaaaaattttgggcacccccttga
UTR01_0058_F08.b : tgacccttgcaaaagtacaaaatttgggtaaacccaattggtaaattatgtctgcccacc
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : cccccgtggggaaaacaccaaatttctatcctttgggcacggtcccccggggaatcaaag
OVRM1_0061_G05.b :
PTG01_0102_E03.b : aaaaaattttgcccccaaaaaaattctccttgggaggacacccctttgtgggggagaacc
UTR01_0058_F08.b : tgaaaattccctttcgggcaatttccccttccttgtgggggaaaaaaactccaaaatttt
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : ccttatcgcgcaaaggggtcaaaaaaaagtgtcccagatgcccaccgggcccattttttg
OVRM1_0061_G05.b :
PTG01_0102_E03.b : ccaaattttttgtctttttgggggcccccccccgcgggggaatactcatttcctttccgc
UTR01_0058_F08.b : gcctattcccatttgggggcccccgggtttccccctgggggggaaaaatcctaaattgcc
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : aaaagggttgcaaaaagggggggggttccccccctgggaaacctcccctccacccttcaa
OVRM1_0061_G05.b :
PTG01_0102_E03.b : ccccggggggggaaaaaaaaaattttttttagttccccccccccccgatattttttttaa
UTR01_0058_F08.b : tcctttttccggggcccact
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : ccccgaaagaaacaataggggttattggaggggtaataaaaaaagaaaacacaacttttc
OVRM1_0061_G05.b :
PTG01_0102_E03.b : taaagtgtgttaaaaaaaaaggggggggtgccccccccggggaagaaataattttttttt
UTR01_0058_F08.b :
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b : cttga
OVRM1_0061_G05.b :
PTG01_0102_E03.b : ttctttttttctcaccccagaagaaaaaaaaaaaaggtttttgtttttggggggcataaa
UTR01_0058_F08.b :
20101001C-007140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b :
HTMT1_0149_D11.b :
OVRM1_0061_G05.b :
PTG01_0102_E03.b : aaaaaaaagaaaaaaccccc
UTR01_0058_F08.b :