[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-001076

Length: 1,606

Sequence [FASTA format sequence]
GGACTTCCCG TGTGGCTCAC AACATAACTA CTCGGCGTTG CTTCTACAGT GGCTGTGGCT
CGACCCCTGG CCTGGGAACT TCCATATGCC GCAGGTGCGG CCACTTGTTT AAACGTGTAG
CGCCGCCACC GGAGGCCCGC CCTCTGCTCT CACCAGCCGA GCTTTGGTTG GGTCCTGGCA
GCTCTGGGAG GCAGCGCCGG AGAGTGAGCC ATGGGGACGG TGCACGCCCG GAGCCTGGAG
CCTCTTCCAG CCAGTGGACC CGATTTCGGA GGATTAGGAG AAGAAGCTGA ATTTGTGGAA
GTTGAACCTG AAGCAAAACA GGAAATTCTT GAGAACAAGG ATGTGGTTGT TCAGCACGTC
CACTTTGACG GCCTTGGAAG GACCAAGGAT GACATCATCA TGTGCGAAAT TGGAGACGTT
TTTAAGGCCA AAAACCTCAT CGAGGTCATG AGGAAATCCC ATGAAGCCCG TGAGAAGTTG
CTTCGTCTAG GAATATTTAG ACAAGTGGAC GTCTTGATTG ACACGTGTCA AGGTGACGAC
GCGCTTCCCA ACGGGTTAGA CGTCACCTTC GAAGTGACGG AACTGCGGCG ACTGACGGGC
AGTTACAACA CCATGGTCGG GAACAACGAG GGCAGCATGG TGCTTGGCCT CAAACTCCCT
AATCTTCTAG GCCGTGCAGA GAAGGTGACG TTTCAGTTTT CCTACGGAAC AAAAGAAACT
TCGTACGGCC TGTCCTTCTT CAAACCACAG CCCGGAAACT TCGAAAGAAA TTTCTCGGTG
AACTTATACA AAGTTACCGG GCAGTTCCCC TGGAGCTCCC TGCGCGAGAC AGACAGAGGG
GTGTCGGCCG AGTACTGTTT CCCCGTGTGG AGGAGCAGCC ACACCGTCAA GTGGGAGGGC
GTGTGGCGCG AGCTGGGCTG CCTGTCCCGG ACCGCGTCGT TCGCCGTCCG CAAGGAGAGC
GGGCACTCGC TCAAGTCGTC TCTCTCGCAC GCGATGGTCC TCGACTCTCG GAACTCCTCC
ATCTTACCGC GAAGGGGCGC TCTGCTCAAA GTTAACCAGG AGCTGGCGGG CTACACCGGA
GGGGACGTGA GCTTCATAAA AGAAGATTTT GAACTTCAGT TGAACAAACA GCTCATATTT
GATTCAGTCT TTTCCGCATC CCTCTGGGGT GGAATGTTGG TGCCCATTGG CGACAAGCCA
TCGAGTATTG CCGACAGGTT TTACCTCGGG GGACCCACGA GCGTGCGCGG CTTCAGCATG
CACAGCGTTG GGCCGCAGAG CGAAGGAGAC TACCTGGGTG GAGAGGCGTA CTGGGCCGGC
GGCCTGCACC TGTACACCCC GTTACCTTTC CGACCCGGCC AGGGCGGCTT TGGAGAGCTC
TTCCGAACGC ACTTTTTTCT NCACGCCGGA NACCTCTGCA ACCTCAACTA TGGCGAGGGC
CCCAAAGCTC ACATTCGCAA GCTGGCTGAG TGCATCCGCT GGTCCTACGG GGCCGGGATC
GTCCTCAGGC TGGGCAACAT CGCCCGGCTG GAGCTGAACT ACTGCATCCC CATGGGCGTG
CNAGGCGGCG ACAGGATATG TGACGGCGTC CAGTTTGGAG CTGGGA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSAMM50sorting and assembly machinery component 50 homolog [Homo sapiens]. 8950.0O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSamm50sorting and assembly machinery component 50 homolog [Mus musculus]. 8810.0O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC474473PREDICTED: similar to SAM50-like protein CGI-51 [Canis familiaris]. 8730.0O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSAMM50sorting and assembly machinery component 50 homolog [Bos taurus]. 8810.0O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100626494PREDICTED: sorting and assembly machinery component 50 homolog, partial [Sus scrofa]. 504e-143O
Contig/Assembly ProteinCGI-51PREDICTED: sorting and assembly machinery component 50 homolog, partial [Sus scrofa]. 2041e-52O


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LNG010059D11LNG01_0059_D11.bBP436787 
LVRM10117D02LVRM1_0117_D02.bBP450639 
OVR010015G02OVR01_0015_G02.b  
OVR010071F03OVR01_0071_F03.bBW965965 
OVRM10067F04OVRM1_0067_F04.bBP151484 
OVRM10106F07OVRM1_0106_F07.bBP151826 
OVRT10093F11OVRT1_0093_F11.bFS694007 
OVRT10129D06OVRT1_0129_D06.bHX237137 AK400689
SPL010015H11SPL01_0015_H11.b  AK350222

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
578C130.571WNACG/T
T300.429ATG/M
690A200.333WSACA/T
G130.667ACG/T
765A030.429BSGAA/E
G400.571GAG/E


Alignment:      TOP

20110601C-001076 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRT1_0129_D06.b : nnncccattcccnnnnnnnccgttagcgttacgatgxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0093_F11.b : nggctttnnnnnnnnccgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : ..........................GGACTTCCCGTGTGGCTCACAACATAACTACTCG
---------+---------+---------+---------+---------+---------+ 34
OVRT1_0129_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxggacttcccgtgtggctcacaacataactactcg
OVRT1_0093_F11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxggacttcccgtgtggctcacaacataactactcg
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : GCGTTGCTTCTACAGTGGCTGTGGCTCGACCCCTGGCCTGGGAACTTCCATATGCCGCAG
---------+---------+---------+---------+---------+---------+ 94
OVRT1_0129_D06.b : gcgttgcttctacagtggctgtggctcgacccctggcctgggaacttccatatgccgcag
OVRT1_0093_F11.b : gcgttgcttctacagtggctgtggctcgacccctggcctgggaacttccatatgccgcag
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : GTGCGGCCACTTGTTTAAACGTGTAGCGCCGCCACCGGAGGCCCGCCCTCTGCTCTCACC
---------+---------+---------+---------+---------+---------+ 154
OVRT1_0129_D06.b : gtgcggccaCTTGTTTAAACGTGTAGCGCCGCCACCGGAGGCCCGCCCTCTGCTCTCACC
OVRT1_0093_F11.b : gtgcggccaCTTGTTTAAACGTGTAGCGCCGCCACCGGAGGCCCGCCCTCTGCTCTCACC
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : AGCCGAGCTTTGGTTGGGTCCTGGCAGCTCTGGGAGGCAGCGCCGGAGAGTGAGCCATGG
---------+---------+---------+---------+---------+---------+ 214
OVRT1_0129_D06.b : AGCCGAGCTTTGGTTGGGTCCTGGCAGCTCTGGGAGGCAGCGCCGGAGAGTGAGCCATGG
OVRT1_0093_F11.b : AGCCGAGCTTTGGTTGGGTCCTGGCAGCTCTGGGAGGCAGCGCCGGAGAGTGAGCCATGG
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : GGACGGTGCACGCCCGGAGCCTGGAGCCTCTTCCAGCCAGTGGACCCGATTTCGGAGGAT
---------+---------+---------+---------+---------+---------+ 274
OVRT1_0129_D06.b : GGACGGTGCACGCCCGGAGCCTGGAGCCTCTTCCAGCCAGTGGACCCGATTTCGGAGGAT
OVRT1_0093_F11.b : GGACGGTGCACGCCCGGAGCCTGGAGCCTCTTCCAGCCAGTGGACCCGATTTCGGAGGAT
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : TAGGAGAAGAAGCTGAATTTGTGGAAGTTGAACCTGAAGCAAAACAGGAAATTCTTGAGA
---------+---------+---------+---------+---------+---------+ 334
OVRT1_0129_D06.b : TAGGAGAAGAAGCTGAATTTGTGGAAGTTGAACCTGAAGCAAAACAGGAAATTCTTGAGA
OVRT1_0093_F11.b : TAGGAGAAGAAGCTGAATTTGTGGAAGTTGAACCTGAAGCAAAACAGGAAATTCTTGAGA
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : ACAAGGATGTGGTTGTTCAGCACGTCCACTTTGACGGCCTTGGAAGGACCAAGGATGACA
---------+---------+---------+---------+---------+---------+ 394
OVRT1_0129_D06.b : ACAAGGATGTGGTTGTTCAGCACGTCCACTTTGACGGCCTTGGAAGGACCAAGGATGACA
OVRT1_0093_F11.b : ACAAGGATGTGGTTGTTCAGCACGTCCACTTTGACGGCCTTGGAAGGACCAAGGATGACA
SPL01_0015_H11.b : nnnnnnnnnnnnnnnnn
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b :
20110601C-001076 : TCATCATGTGCGAAATTGGAGACGTTTTTAAGGCCAAAAACCTCATCGAGGTCATGAGGA
---------+---------+---------+---------+---------+---------+ 454
OVRT1_0129_D06.b : TCATCATGTGCGAAATTGGAGACGTTTTTAAGGCCAAAAACCTCATCGAGGTCATGAGGA
OVRT1_0093_F11.b : TCATCATGTGCGAAATTGGAGACGTTTTTAAGGCCAAAAACCTCATCGAGGTCATGAGGA
SPL01_0015_H11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0117_D02.b : cattgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0067_F04.b : agttgtcxxxxxxxxxxxxxx
OVR01_0071_F03.b : nnnnggcttggactatnacxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0106_F07.b : nagttgtcxxxxx
OVR01_0015_G02.b : ggcttttattgtgcactatagaacaggttttggacaaaaaagctgggtcggta
LNG01_0059_D11.b :
20110601C-001076 : AATCCCATGAAGCCCGTGAGAAGTTGCTTCGTCTAGGAATATTTAGACAAGTGGACGTCT
---------+---------+---------+---------+---------+---------+ 514
OVRT1_0129_D06.b : AATCCCATGAAGCCCGTGAGAAGTTGCTTCGTCTAGGAATATTTAGACAAGTGGACGTCT
OVRT1_0093_F11.b : AATCCCATGAAGCCCGTGAGAAGTTGCTTCGTCTAGGAATATTTAGACAAGTGGACGTCT
SPL01_0015_H11.b : xxTCCCATGAAGCCCGTGG**AGTTGCTTCGTCTAGGA*TATTTAGACAAGTGGACGTCT
LVRM1_0117_D02.b : xxTCCCATGAAGCCCGTGAGAAGTTGCTTCGTCTAGGAATATTTAGACAAGTGGACGTCT
OVRM1_0067_F04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAATATTTAGACAAGTGGACGTCT
OVR01_0071_F03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTATTTAGACAAGTGGACGTCT
OVRM1_0106_F07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGGACGTCT
OVR01_0015_G02.b : ccgagtccgggaattccctcgtgcaccggttcaggcctccggtagaacatgaGGACGTCT
LNG01_0059_D11.b :
20110601C-001076 : TGATTGACACGTGTCAAGGT*GACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
---------+---------+---------+---------+---------+---------+ 572
OVRT1_0129_D06.b : TGATTGACACGTGTCAAGGT*GACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
OVRT1_0093_F11.b : TGATTGACACGTGTCAAGGT*GACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
SPL01_0015_H11.b : TG*TTGACACGTGTCAAGGTAGACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
LVRM1_0117_D02.b : TGATTGACACGTGTCAAGGT*GACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
OVRM1_0067_F04.b : TGATTGACACGTGTCAAGGT*GACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
OVR01_0071_F03.b : TGATTGACACGTGTCAAGGT*GACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
OVRM1_0106_F07.b : TGATTGACACGTGTCAAGGT*GACGACGCGCT*TCCCAACGGGTTAGACGTCACCTTCGA
OVR01_0015_G02.b : TCATCGACACGTGTCATGGTGGACGACGCGCTCTCCCAACGGGTTAGACGTCACCTTCGA
LNG01_0059_D11.b :
20110601C-001076 : AGTGA*CGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
---------+---------+---------+---------+---------+---------+ 631
OVRT1_0129_D06.b : AGTGA*TGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
OVRT1_0093_F11.b : AGTGA*TGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
SPL01_0015_H11.b : AGTGA*CGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
LVRM1_0117_D02.b : AGTGA*CGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
OVRM1_0067_F04.b : AGTGA*CGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
OVR01_0071_F03.b : AGTGA*TGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
OVRM1_0106_F07.b : AGTGA*CGGAACTGCGGCGACTGACGGGCAGTTACAACACCATGGTCGGGAACAACGAGG
OVR01_0015_G02.b : AGTGATCGGAACCGCGGCGACCGACGGGCAGTTACAACACCACGGTCGGGAACAACGAGG
LNG01_0059_D11.b :
20110601C-001076 : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACGT
---------+---------+---------+---------+---------+---------+ 691
OVRT1_0129_D06.b : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACAT
OVRT1_0093_F11.b : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACAT
SPL01_0015_H11.b : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACGT
LVRM1_0117_D02.b : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACGT
OVRM1_0067_F04.b : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACGT
OVR01_0071_F03.b : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACAT
OVRM1_0106_F07.b : GCAGCATGGTGCTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACGT
OVR01_0015_G02.b : GCAGCATGGTGCTAGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAGAAGGTGACAT
LNG01_0059_D11.b :
20110601C-001076 : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTCAAACCACAGC
---------+---------+---------+---------+---------+---------+ 751
OVRT1_0129_D06.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTTCAAACACAGC
OVRT1_0093_F11.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTCAAACCACAGC
SPL01_0015_H11.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTCAAACCACAGC
LVRM1_0117_D02.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTCAAACCACGGC
OVRM1_0067_F04.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTCAAACCACAGC
OVR01_0071_F03.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTCAAACCACAGC
OVRM1_0106_F07.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTGTCCTTCTTCAAACCACAGC
OVR01_0015_G02.b : TTCAGTTTTCCTACGGAACAAAAGAAACTTCGTACGGCCTATCCTTCTTCAAACCACAGC
LNG01_0059_D11.b : ntttcgggctggacttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-001076 : CCGGAAACTTCGAAAGAAATTTCTCGGTGAACTTATACAAAGTTACCGGGCAGTTCCCCT
---------+---------+---------+---------+---------+---------+ 811
OVRT1_0129_D06.b : CCGGAAACTTCGAGAGAAATTTCTCGGTGAACTTATACAAAAGTACCGGGCAGTTCCCCT
OVRT1_0093_F11.b : CCGGAAACTTCGAGAGAAATTTCTCGGTGAACTTATACAAAAGTACCGGGCAGTTCCCCT
SPL01_0015_H11.b : CCGGAAACTTCGAGAGAAATTTCTCGGTGAACTTATACAAAGTTACCGGGCAGTTCCCCT
LVRM1_0117_D02.b : CCGGAAACTTCGAAAGAAATTTCTCGGTGAACTTATACAAAGTTACCGGGCAGTTCCCCT
OVRM1_0067_F04.b : CCGGAAACTTCGAAAGAAATTTCTCGGTGAACATATACAAAGTTACCGGGCAGTTCCCCT
OVR01_0071_F03.b : CCGGAAACTTCGAGAGAAATTTCTCGGTGAACTTATACAAAGTTACCGGGCAGTTCCCCT
OVRM1_0106_F07.b : CCGGAAACTTCGAAAGAAATTTCTCGGTGAACTTATACAAAGTTACCGGGCAGTTCCCCT
OVR01_0015_G02.b : CCGGAAACTTCGAGAGAAATTTCTCGGTGAACTTATACAAAGTTACCGGGCAGTTCCCCT
LNG01_0059_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxGTGAACTTATACAAAGTTACCGGGCAGTTCCCCT
20110601C-001076 : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
---------+---------+---------+---------+---------+---------+ 871
OVRT1_0129_D06.b : GGAGCTCCCTGCGCGAGACAGACAGAAGGGTGTCCGCCGAGTACTGTTTCCCCGTGTGGA
OVRT1_0093_F11.b : GGAGCTCCCTGCGCGAGACA*ACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
SPL01_0015_H11.b : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
LVRM1_0117_D02.b : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
OVRM1_0067_F04.b : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
OVR01_0071_F03.b : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
OVRM1_0106_F07.b : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
OVR01_0015_G02.b : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
LNG01_0059_D11.b : GGAGCTCCCTGCGCGAGACAGACAGAGGGGTGTCGGCCGAGTACTGTTTCCCCGTGTGGA
20110601C-001076 : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
---------+---------+---------+---------+---------+---------+ 931
OVRT1_0129_D06.b : GAAGCACCA**CACGTCAAGTGGGAGGGCTTGTGGCCCGANCTGGGCTGCCTGTCCCGaa
OVRT1_0093_F11.b : GGAGCAGCCACACCGTCCAGTGGGAGGGCGTGTGGCCCNAGCTGGGCTGCCTGTCCGGGA
SPL01_0015_H11.b : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
LVRM1_0117_D02.b : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
OVRM1_0067_F04.b : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
OVR01_0071_F03.b : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
OVRM1_0106_F07.b : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
OVR01_0015_G02.b : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
LNG01_0059_D11.b : GGAGCAGCCACACCGTCAAGTGGGAGGGCGTGTGGCGCGAGCTGGGCTGCCTGTCCCGGA
20110601C-001076 : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
---------+---------+---------+---------+---------+---------+ 991
OVRT1_0129_D06.b : cgcgtcgttcgcctccgcaagagagcggcactcgctcagtcgtcccctcccagcaatggt
OVRT1_0093_F11.b : ACGCGTCGTTCGCCGTCgcaaggagagcggcactcgctcaagtcgtctcctcgcacgcaa
SPL01_0015_H11.b : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
LVRM1_0117_D02.b : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
OVRM1_0067_F04.b : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
OVR01_0071_F03.b : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
OVRM1_0106_F07.b : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
OVR01_0015_G02.b : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
LNG01_0059_D11.b : CCGCGTCGTTCGCCGTCCGCAAGGAGAGCGGGCACTCGCTCAAGTCGTCTCTCTCGCACG
20110601C-001076 : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAAAG
---------+---------+---------+---------+---------+---------+ 1051
OVRT1_0129_D06.b : cccgattctggaatcctcatctacccgaaaggcgccttgcccaattaaccaaaactgggg
OVRT1_0093_F11.b : tggtcctcaatctcggactcttcttcttcccgaagggcccttctgccaaagttacccgga
SPL01_0015_H11.b : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAA
LVRM1_0117_D02.b : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAAAG
OVRM1_0067_F04.b : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAAAG
OVR01_0071_F03.b : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAAAG
OVRM1_0106_F07.b : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAAAG
OVR01_0015_G02.b : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAAAG
LNG01_0059_D11.b : CGATGGTCCTCGACTCTCGGAACTCCTCCATCTTACCGCGAAGGGGCGCTCTGCTCAAAG
20110601C-001076 : TTAACCAGGAGCTGGCGGGCTACACCGGAGGGGACGTGAGCTTCATAAAAGAAGATTTTG
---------+---------+---------+---------+---------+---------+ 1111
OVRT1_0129_D06.b : ggtccccggagggaacgtgcttctaaaaaaattttaactttttaaaaacccctatttttt
OVRT1_0093_F11.b : ctggcggctacacgaagggacatgacttctaaaaaaatttgaactttgttaaaaacacct
SPL01_0015_H11.b :
LVRM1_0117_D02.b : TTAACCAGGAGCTGGCGGGCTACACCGGAAGGGACGTGAGCTTCATAAAAGAAGATTTTG
OVRM1_0067_F04.b : TTAACCAGGAGCTGGCGGGCTACACCGGAGGGGACGTGAGCTTCATAAAAGAAGATTTTG
OVR01_0071_F03.b : TTAACCAGGAGCTGGCGGGCTACACCGGAGGGGACGTGAGCTTCATAAAAGAAGATTTTG
OVRM1_0106_F07.b : TTAACCAGGAGCTGGCGGGCTACACCGGAGGGGACGTGAGCTTCATAAAAGAAGATTTTG
OVR01_0015_G02.b : TTAACCAGGAGCTGGCGGGCTACACCGGAGGGGACGTGAGCTTCATAAAAGAAGATTTTG
LNG01_0059_D11.b : TTAACCAGGAGCTGGCGGGCTACACCGGAGGGGACGTGAGCTTCATAAAAGAAGATTTTG
20110601C-001076 : AACTTCAGTTGAACAAACAGCTCATATTTGATTCAGTCTTTTCCGCATCCCTCTGGGGTG
---------+---------+---------+---------+---------+---------+ 1171
OVRT1_0129_D06.b : tgtgggttcacaacnaccccccgttttttccccgttttagcaaaaaaacctcccaaacaa
OVRT1_0093_F11.b : catttgatccggggatctaccaaaatccccccgggtttttcccggttttgaacttaaaaa
SPL01_0015_H11.b :
LVRM1_0117_D02.b : AACTTCAGTTGAACAAACAGCTCATATTTGATTCAGTCTTTTCCGCATCCCTCTGGGGTG
OVRM1_0067_F04.b : AACTTCAGTTGAACAAACAGCTCATATTTGATTCAGTCTTTTCCGCATCCCTCTGGGGTG
OVR01_0071_F03.b : AACTTCAGTTGAACAAACAGCTCATATTTGATTCAGTCTTTTCCGCATCCCTCTGGGGTG
OVRM1_0106_F07.b : AACTTCAGTTGAACAAACAGCTCATATTTGATTCAGTCTTTTCCGCATCCCTCTGGGGTG
OVR01_0015_G02.b : AACTTCAGTTGAACAAACAGCTCATATTTGATTCAGTCTTTTCCGCATCCCTCTGGGGTG
LNG01_0059_D11.b : AACTTCAGTTGAACAAACAGCTCATATTTGATTCAGTCTTTTCCGCATCCCTCTGGGGTG
20110601C-001076 : GAATGTTGGTGCCCATTGGCGACAAGCCATCGAGTATTGCCGACAGGTTTTACCTCGGGG
---------+---------+---------+---------+---------+---------+ 1231
OVRT1_0129_D06.b : aaaaaaagattcccgggccccgggaacacaaaaggaagaggttcccccccccgggagagg
OVRT1_0093_F11.b : cccttctcaattaaaactaaagaggatcccgtggaccccgggaaacaaaataccgggaag
SPL01_0015_H11.b :
LVRM1_0117_D02.b : GAATGTTGGTGCCCATTGGCGA
OVRM1_0067_F04.b : GAATGTTGGTGCCCATTGGCGACAAGCCATCGAGTATTGCCGACAGGTTTTTACTCGGGG
OVR01_0071_F03.b : GGATGTTGGTGCCCATTGGCGACCAGCCGTCGAGTATTGCCGACAGGTTTTAACTCGGGG
OVRM1_0106_F07.b : GAATGTTGGTGCCCATTGGCGATAAGCCGTCGAGTATTGCCGACAGGTTTTACCTCGGGG
OVR01_0015_G02.b : GAATGTTGGTGCCCATTGGCGACAAGCCGTCGAGTATTGCCGACAGGTTTTACCTCGGGG
LNG01_0059_D11.b : GAATGTTGGTGCCCATTGGCGACAAGCCATCGAGTATTGCCGACAGGTTTTACCTCGGGG
20110601C-001076 : GACCCACGAGCGTGCGCGGCTTCAGCATGCACAGCGTTGGGCCGCAGAGCGAAGGAGACT
---------+---------+---------+---------+---------+---------+ 1291
OVRT1_0129_D06.b : tcccccccccaagattgaaggtgtgtgggggccgctcttcttccccaaaaaaaannnnnn
OVRT1_0093_F11.b : ggtttcccgccccccgggaaaaaactgtcccccc
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b : GAACCACGAGCGTGCGCGGCTTCAGC
OVR01_0071_F03.b : GACCCACGAGCGTGCGCGGCTTCAGCATGCACAGCGTTGGGCCccaaagccaagaaacta
OVRM1_0106_F07.b : GACCCACGAGCGTGCGCGGCTTCAGCATGCACAGCGTTGGGCCGCAGAGCGaaagagact
OVR01_0015_G02.b : GACCCACGAGCGTGCGCGGCTTCAGCATGCACAGCGTTGGGCCGCAGAGCGAAGGAGACT
LNG01_0059_D11.b : GACCCACGAGCGTGCGCGGCTTCAGCATGCACAGCGTTGGGCCGCAGAGCGAAGGAGACT
20110601C-001076 : ACCTGGG*TGGAGAGGCGTACTGGGCCGGCGGCCTGCACCTGTACACCCCGTTACCTTTC
---------+---------+---------+---------+---------+---------+ 1350
OVRT1_0129_D06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b : actgggtggaaagggctatggggccggcgcctgcacctgtaccccccttacctttccaac
OVRM1_0106_F07.b : acctgggt
OVR01_0015_G02.b : NACTGGGGTGGAGAGGCGTACTGGGCCGGCGGCCTGCNACTGTACACCTCGTTACTTTTT
LNG01_0059_D11.b : ACCTGGG*TGGAGAGGCGTACTGGGCCGGCGGCCTGCACCTGTACACCCCGTTACCTTTC
20110601C-001076 : CGACCCGGCCAGGGCGGCTTTGGAGAGCTCTTCCGAACGCACTTTTTTCTNCACGCCGGA
---------+---------+---------+---------+---------+---------+ 1410
OVRT1_0129_D06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b : cggccagggcggttttggaaagtcttccgaacccactttttttccaagcccggaaacctc
OVRM1_0106_F07.b :
OVR01_0015_G02.b : CGA*CCGGNCAGGGCGGCTTTGGAGAGCTCTTC*GAACGCACTTTTTTCTtncacgcgga
LNG01_0059_D11.b : CGACCCGGCCAGGGCGGCTTTGGAGAGCTCTTCCGAACGCACTTTTTTCTNCACGCCGGA
20110601C-001076 : NACCTCTGCAACCTCAACTATGGCGAGGGCCCCAAAGCTCACATTCGCAAGCTGGCTGAG
---------+---------+---------+---------+---------+---------+ 1470
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b : tgcaacctcactttggggagggccccaaagttcccatttccaagcggggtaaaggaaccc
OVRM1_0106_F07.b :
OVR01_0015_G02.b : aact
LNG01_0059_D11.b : NACCTCTGCAACCTCAACTATGGCGAGGGCCCCAAAGCTCACATTCGCAAGCTGGCTGAG
20110601C-001076 : TGCATCCGCTGGTCCTACGGGGCCGGGATCGTCCTCAGGCTGGGCAACATCGCCCGGCTG
---------+---------+---------+---------+---------+---------+ 1530
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b : cctggtcccacggggccgggaatttcctccgggtggggaaaaatcccccgggtggggact
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : TGCATCCGCTGGTCCTACGGGGCCGGGATCGTCCTCAGGCTGGGCAACATCGCCCGGCTG
20110601C-001076 : GAGCTGAACTACTGCATCCCCATGGGCGTGCNAGGCGGCGACAGGATATGTGACGGCGTC
---------+---------+---------+---------+---------+---------+ 1590
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b : aaaatacttggattccccttgggcgttgcaagggcggccaacagggattagggaacgccc
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : GAGCTGAACTACTGCATCCCCATGGGCGTGCNAGGCGGCGACAGGATATGTGACGGCGTC
20110601C-001076 : CAGTTTGGAGCTGGGA............................................
---------+---------+---------+---------+---------+---------+ 1606
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b : cccccctttgggaactgggaataaggttcctgtaacccaaaggtt
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : CAGTTTGGAGCTGGGAtcaggttcctgtagccgatgctgaagcctccggcccctccaggg
20110601C-001076 : ............................................................
---------+---------+---------+---------+---------+---------+ 1606
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : caacgtgcggactgggcagcattgagtcatttggtgcaccaccttttgttccaaacgacc
20110601C-001076 : ............................................................
---------+---------+---------+---------+---------+---------+ 1606
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : gcagtccttgtgggaaacacttcaataattttaaagacaaaaaaaaaaaaaagccccatg
20110601C-001076 : ............................................................
---------+---------+---------+---------+---------+---------+ 1606
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : tgttcaacttgcagtcgcgggcccttctaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-001076 : ............................................................
---------+---------+---------+---------+---------+---------+ 1606
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-001076 : ............................................................
---------+---------+---------+---------+---------+---------+ 1606
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : xxxaccccgtgcggggaaaaggctacttgggacttttgaagaacctcctttgggggtggc
20110601C-001076 : ............................................................
---------+---------+---------+---------+---------+---------+ 1606
OVRT1_0129_D06.b :
OVRT1_0093_F11.b :
SPL01_0015_H11.b :
LVRM1_0117_D02.b :
OVRM1_0067_F04.b :
OVR01_0071_F03.b :
OVRM1_0106_F07.b :
OVR01_0015_G02.b :
LNG01_0059_D11.b : catttgaaaacttcctcaatt