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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-001978

Length: 900

Sequence [FASTA format sequence]
CTAGATGGAA AAGGGAGAGG CCACCATGTC CTCTTGGAGC CCAGAAGGAA AACAGAGAGT
TCTTCAACCT GACTCAGATG CCTGCTGACA TCCTCCAGGG CATCCCTAAC CTCCAGGAAC
TGCACCTTTC CAACAACCAG CTGGAGGACC TTTCAGCCAA GTTCCTGCTG CCTGTGCCTC
AGCTAAAGGT GCTCGATCTG ACCCGCAACG CCCTGAAACG CCTGCCCCCT GGCCTCTTCA
AGGTCTCGGC TGCCCTCCAC ACCCTGGTGC TGAAGGAAAA CCGGCTAGAC ATTCTGGACG
CCTCGTGGCT ACGTGGCCTG AAAGCCCTCA GGCATCTGGA CTTGTCAGGG AACCAGCTCC
GGACACTGCC CCGCAAGCTG CTGGCCAACT TCACTGACCT GCACATCCTT GACCTTGGCA
ATAACCAGCT GCAGACTTTG CCCCCTGACC TCCTGAGGGG CCCCTTGAAG TTGGAATGGC
TGCACCTTGA GGGCAATAGA TTGCAGGTGC TCGAAGAGGG CTTTCTGGCG CCCCAGCCAA
AACTGCGCTA CCTTTTTCTA AACAACAACA AGCTGACCAC GCTGGCAGCT GGTGCTTTCC
GAGGTCTGCA GGTGCTGGAC ATGCTGGACC TCTCCAACAA CTCACTGACC AGTGTTCCCG
AGGGGCTCTG GGCATCCTTG GGAAAGGCTG CCGGCAACAT GAAGGTTGGT TTTGACATCT
CAGGGAACCC CTGGATCTGT GACCAGAAAC TAGATGACCT CTATCGGTGG CTTGTGGCCA
ACGAAGACAA GATGTTTTTC CAGAACAACA CTCACTGTGC TGGCCCCAAA GCCTTGGAGG
GCCAGACGCT CCTGGCAGTG GCTGCGTCTC TTGAGGCCTA GGGCTAGGGT TAGGGTGGGG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLRG1leucine-rich alpha-2-glycoprotein precursor [Homo sapiens]. 395e-110
Contig/Assembly ProteinCPN2carboxypeptidase N subunit 2 [Homo sapiens]. 1241e-28
Contig/Assembly ProteinLRRC15leucine-rich repeat-containing protein 15 isoform a [Homo sapiens]. 1211e-27
Contig/Assembly ProteinLRRC15leucine-rich repeat-containing protein 15 isoform b [Homo sapiens]. 1211e-27
Contig/Assembly ProteinCHADLchondroadherin-like protein precursor [Homo sapiens]. 1172e-26
Contig/Assembly ProteinGP1BAplatelet glycoprotein Ib alpha chain precursor [Homo sapiens]. 1142e-25
Contig/Assembly ProteinLRRTM4leucine-rich repeat transmembrane neuronal protein 4 isoform b [Homo sapiens]. 1057e-23
Contig/Assembly ProteinLRRTM4leucine-rich repeat transmembrane neuronal protein 4 isoform a [Homo sapiens]. 1057e-23
Contig/Assembly ProteinIGFALSinsulin-like growth factor-binding protein complex acid labile subunit isoform 1 precursor [Homo sapiens]. 1032e-22
Contig/Assembly ProteinIGFALSinsulin-like growth factor-binding protein complex acid labile subunit isoform 2 precursor [Homo sapiens]. 1032e-22


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLrg1leucine-rich alpha-2-glycoprotein [Mus musculus]. 3383e-93
Contig/Assembly ProteinCpn2carboxypeptidase N subunit 2 [Mus musculus]. 1232e-28
Contig/Assembly ProteinLrrc15leucine-rich repeat-containing protein 15 precursor [Mus musculus]. 1225e-28
Contig/Assembly ProteinChadlchondroadherin-like [Mus musculus]. 1192e-27
Contig/Assembly ProteinIgfalsinsulin-like growth factor-binding protein complex acid labile subunit precursor [Mus musculus]. 1123e-25
Contig/Assembly ProteinGp5platelet glycoprotein V precursor [Mus musculus]. 1102e-24
Contig/Assembly ProteinLrrtm4leucine-rich repeat transmembrane neuronal protein 4 [Mus musculus]. 1054e-23
Contig/Assembly ProteinRtn4rl2reticulon-4 receptor-like 2 precursor [Mus musculus]. 1019e-22
Contig/Assembly ProteinLrrtm3leucine-rich repeat transmembrane neuronal protein 3 precursor [Mus musculus]. 99.43e-21
Contig/Assembly ProteinChadchondroadherin precursor [Mus musculus]. 994e-21


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC611876PREDICTED: similar to leucine-rich alpha-2-glycoprotein 1 [Canis familiaris]. 412e-115
Contig/Assembly ProteinLOC488042PREDICTED: similar to Carboxypeptidase N subunit 2 precursor (Carboxypeptidase N polypeptide 2) (Carboxypeptidase N 83 kDa chain) (Carboxypeptidase N regulatory subunit) (Carboxypeptidase N large subunit) [Canis familiaris]. 1362e-32
Contig/Assembly ProteinLOC488041PREDICTED: similar to leucine rich repeat containing 15 [Canis familiaris]. 1262e-29
Contig/Assembly ProteinLOC481234PREDICTED: similar to Ran GTPase-activating protein 1 [Canis familiaris]. 1171e-26
Contig/Assembly ProteinLOC483091PREDICTED: similar to Leucine-rich repeat transmembrane neuronal protein 4 precursor isoform 1 [Canis familiaris]. 1058e-23
Contig/Assembly ProteinLOC483091PREDICTED: similar to Leucine-rich repeat transmembrane neuronal protein 4 precursor isoform 2 [Canis familiaris]. 1058e-23
Contig/Assembly ProteinLOC490069PREDICTED: similar to insulin-like growth factor binding protein, acid labile subunit [Canis familiaris]. 1041e-22
Contig/Assembly ProteinLOC609296PREDICTED: similar to Chondroadherin precursor (Cartilage leucine-rich protein) [Canis familiaris]. 1025e-22
Contig/Assembly ProteinLOC489009PREDICTED: similar to Leucine-rich repeat transmembrane neuronal protein 3 precursor isoform 1 [Canis familiaris]. 1002e-21
Contig/Assembly ProteinLOC484910PREDICTED: similar to Fibromodulin precursor (FM) (Collagen-binding 59 kDa protein) (Keratan sulfate proteoglycan fibromodulin) (KSPG fibromodulin) [Canis familiaris]. 1001e-21


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLRG1leucine-rich alpha-2-glycoprotein [Bos taurus]. 423e-119
Contig/Assembly ProteinCPN2carboxypeptidase N subunit 2 [Bos taurus]. 1371e-32
Contig/Assembly ProteinIGFALSinsulin-like growth factor-binding protein complex acid labile subunit [Bos taurus]. 1117e-25
Contig/Assembly ProteinGP5PREDICTED: glycoprotein V (platelet) [Bos taurus]. 1102e-24
Contig/Assembly ProteinLRRTM4PREDICTED: leucine rich repeat transmembrane neuronal 2-like [Bos taurus]. 1055e-23
Contig/Assembly ProteinLRRTM4PREDICTED: leucine rich repeat transmembrane neuronal 2-like isoform 3 [Bos taurus]. 1055e-23
Contig/Assembly ProteinLRRTM3leucine-rich repeat transmembrane neuronal protein 3 [Bos taurus]. 1002e-21
Contig/Assembly ProteinCHADchondroadherin precursor [Bos taurus]. 99.83e-21
Contig/Assembly ProteinRTN4RL2PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus]. 99.44e-21
Contig/Assembly ProteinRTN4RL2PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus]. 99.44e-21


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100524848PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 1 [Sus scrofa]. 549e-157
Contig/Assembly ProteinLOC100524848PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 2 [Sus scrofa]. 535e-152O
Contig/Assembly ProteinLOC100627664PREDICTED: leucine-rich repeat-containing protein 15-like [Sus scrofa]. 1278e-30
Contig/Assembly ProteinCPN2PREDICTED: carboxypeptidase N subunit 2 [Sus scrofa]. 1261e-29
Contig/Assembly ProteinIGFALSinsulin-like growth factor-binding protein complex acid labile subunit [Sus scrofa]. 1092e-24
Contig/Assembly ProteinLOC100523640PREDICTED: platelet glycoprotein V-like [Sus scrofa]. 1053e-23
Contig/Assembly ProteinLRRTM4PREDICTED: leucine-rich repeat transmembrane neuronal protein 4 isoform 1 [Sus scrofa]. 1054e-23
Contig/Assembly ProteinLRRTM4PREDICTED: leucine-rich repeat transmembrane neuronal protein 4 isoform 2 [Sus scrofa]. 1054e-23
Contig/Assembly ProteinLOC100624069PREDICTED: chondroadherin-like [Sus scrofa]. 1001e-21
Contig/Assembly ProteinLRRTM2PREDICTED: leucine-rich repeat transmembrane neuronal protein 2 [Sus scrofa]. 1008e-22


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LNG010079D02LNG01_0079_D02.bBP436076 
LVR010105A06LVR01_0105_A06.bBP441403 
LVRM10041H11LVRM1_0041_H11.bCJ001957 
LVRM10056B02LVRM1_0056_B02.bBP138009 AK232959
LVRM10063D06LVRM1_0063_D06.bBP139122 
LVRM10077A10LVRM1_0077_A10.bBP137865 
LVRM10097F08LVRM1_0097_F08.bCJ003786 
LVRM10195H02LVRM1_0195_H02.bCJ006633 
OVRM10202A11OVRM1_0202_A11.bBP455452 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
152C020.222MSCTC/L
T250.778CTT/L
547A020.222MNCAC/H
G250.778CGC/R


Alignment:      TOP

20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0056_B02.b : cagtgacxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0202_A11.b : agttgtcxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0063_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0079_D02.b : tttnnggattggacatgacagxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0097_F08.b : cgttgtcxxxxxxxxxxxxxxxxxxxxx
LVRM1_0195_H02.b : ttgtcxxxxxxxxxxxxxxxxxxxxx
LVRM1_0041_H11.b : xxxxxxxxxxxxxxxx
LVRM1_0077_A10.b : agttgacxxxxxxxxxxxxxxxxxxxx
LVR01_0105_A06.b : gggggccctagcatagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-001978 : .............................CTAGATGGAAAAGGGAGAGGCCACCATGTCC
---------+---------+---------+---------+---------+---------+ 31
LVRM1_0056_B02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTAGATGGAAAAGGGAGAGGCCACCATGTCC
OVRM1_0202_A11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxctAGATGGAAAAGGGAGAGGCCACCATGTCC
LVRM1_0063_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtAGATGGAAAAGGGAGAGGCCACCATGTCC
LNG01_0079_D02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGATGGAAAAGGGAGAGGCCACCATGTCC
LVRM1_0097_F08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGATGGAAAAGGGAGAGGCCACCATGTCC
LVRM1_0195_H02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGATGGAAAAGGGAGAGGCCACCATGTCC
LVRM1_0041_H11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGATGGAAAAGGGAGAGGCCACCATGTCC
LVRM1_0077_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGATGGAAAAGGGAGAGGCCACCATGTCC
LVR01_0105_A06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGATGGAAAAGGGAGAGGCCACCATGTCC
20110601C-001978 : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
---------+---------+---------+---------+---------+---------+ 91
LVRM1_0056_B02.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
OVRM1_0202_A11.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
LVRM1_0063_D06.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
LNG01_0079_D02.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
LVRM1_0097_F08.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
LVRM1_0195_H02.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
LVRM1_0041_H11.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
LVRM1_0077_A10.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGGCTCAGATGCCTGCTGACAT
LVR01_0105_A06.b : TCTTGGAGCCCAGAAGGAAAACAGAGAGTTCTTCAACCTGACTCAGATGCCTGCTGACAT
20110601C-001978 : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
---------+---------+---------+---------+---------+---------+ 151
LVRM1_0056_B02.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
OVRM1_0202_A11.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
LVRM1_0063_D06.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
LNG01_0079_D02.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
LVRM1_0097_F08.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
LVRM1_0195_H02.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
LVRM1_0041_H11.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
LVRM1_0077_A10.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCNACAACCAGCTGGAGGACCT
LVR01_0105_A06.b : CCTCCAGGGCATCCCTAACCTCCAGGAACTGCACCTTTCCAACAACCAGCTGGAGGACCT
20110601C-001978 : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
---------+---------+---------+---------+---------+---------+ 211
LVRM1_0056_B02.b : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
OVRM1_0202_A11.b : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
LVRM1_0063_D06.b : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
LNG01_0079_D02.b : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
LVRM1_0097_F08.b : CTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
LVRM1_0195_H02.b : CTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
LVRM1_0041_H11.b : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
LVRM1_0077_A10.b : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
LVR01_0105_A06.b : TTCAGCCAAGTTCCTGCTGCCTGTGCCTCAGCTAAAGGTGCTCGATCTGACCCGCAACGC
20110601C-001978 : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
---------+---------+---------+---------+---------+---------+ 271
LVRM1_0056_B02.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
OVRM1_0202_A11.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
LVRM1_0063_D06.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
LNG01_0079_D02.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
LVRM1_0097_F08.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
LVRM1_0195_H02.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
LVRM1_0041_H11.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
LVRM1_0077_A10.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
LVR01_0105_A06.b : CCTGAAACGCCTGCCCCCTGGCCTCTTCAAGGTCTCGGCTGCCCTCCACACCCTGGTGCT
20110601C-001978 : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
---------+---------+---------+---------+---------+---------+ 331
LVRM1_0056_B02.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
OVRM1_0202_A11.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
LVRM1_0063_D06.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
LNG01_0079_D02.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
LVRM1_0097_F08.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
LVRM1_0195_H02.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
LVRM1_0041_H11.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
LVRM1_0077_A10.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
LVR01_0105_A06.b : GAAGGAAAACCGGCTAGACATTCTGGACGCCTCGTGGCTACGTGGCCTGAAAGCCCTCAG
20110601C-001978 : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
---------+---------+---------+---------+---------+---------+ 391
LVRM1_0056_B02.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
OVRM1_0202_A11.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
LVRM1_0063_D06.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
LNG01_0079_D02.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
LVRM1_0097_F08.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
LVRM1_0195_H02.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
LVRM1_0041_H11.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
LVRM1_0077_A10.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
LVR01_0105_A06.b : GCATCTGGACTTGTCAGGGAACCAGCTCCGGACACTGCCCCGCAAGCTGCTGGCCAACTT
20110601C-001978 : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
---------+---------+---------+---------+---------+---------+ 451
LVRM1_0056_B02.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
OVRM1_0202_A11.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
LVRM1_0063_D06.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
LNG01_0079_D02.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
LVRM1_0097_F08.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
LVRM1_0195_H02.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
LVRM1_0041_H11.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
LVRM1_0077_A10.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
LVR01_0105_A06.b : CACTGACCTGCACATCCTTGACCTTGGCAATAACCAGCTGCAGACTTTGCCCCCTGACCT
20110601C-001978 : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
---------+---------+---------+---------+---------+---------+ 511
LVRM1_0056_B02.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
OVRM1_0202_A11.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
LVRM1_0063_D06.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
LNG01_0079_D02.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
LVRM1_0097_F08.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
LVRM1_0195_H02.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
LVRM1_0041_H11.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
LVRM1_0077_A10.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
LVR01_0105_A06.b : CCTGAGGGGCCCCTTGAAGTTGGAATGGCTGCACCTTGAGGGCAATAGATTGCAGGTGCT
20110601C-001978 : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACAACAACAA
---------+---------+---------+---------+---------+---------+ 571
LVRM1_0056_B02.b : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACAACAACAA
OVRM1_0202_A11.b : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACAACAACAA
LVRM1_0063_D06.b : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACA*CAACAA
LNG01_0079_D02.b : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACAACAACAA
LVRM1_0097_F08.b : CGAAGAGGGCTTTCTGGCGCACCAGCCAAAACTGCACTACCTTTTTCTAAACAACAACAA
LVRM1_0195_H02.b : CGAAGAGGGCTTTCTGGCGCACCAGCCAAAACTGCACTACCTTTTTCTAAACAACAACAA
LVRM1_0041_H11.b : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACAACAACAA
LVRM1_0077_A10.b : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACAACAACNA
LVR01_0105_A06.b : CGAAGAGGGCTTTCTGGCGCCCCAGCCAAAACTGCGCTACCTTTTTCTAAACAACAACAA
20110601C-001978 : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
---------+---------+---------+---------+---------+---------+ 631
LVRM1_0056_B02.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
OVRM1_0202_A11.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
LVRM1_0063_D06.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
LNG01_0079_D02.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
LVRM1_0097_F08.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCANGTGCTGGACATGCTGGACCT
LVRM1_0195_H02.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
LVRM1_0041_H11.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
LVRM1_0077_A10.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
LVR01_0105_A06.b : GCTGACCACGCTGGCAGCTGGTGCTTTCCGAGGTCTGCAGGTGCTGGACATGCTGGACCT
20110601C-001978 : CTCCAACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
---------+---------+---------+---------+---------+---------+ 691
LVRM1_0056_B02.b : CTCCAACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
OVRM1_0202_A11.b : CTCCAACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
LVRM1_0063_D06.b : CTCCAACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
LNG01_0079_D02.b : CTCCAACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
LVRM1_0097_F08.b : CTCCAACAACTCACTGACCAGTGTTCCCGAAGGGCTCTGGGCATCCTTGGGAAAGGGCTG
LVRM1_0195_H02.b : CTCCAACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
LVRM1_0041_H11.b : CTCCAACAACTCACTGACTAGTGTTNCCGAGGGGCTCTGGGCATCCTTGGGGAAGGCTGC
LVRM1_0077_A10.b : CTCCNACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
LVR01_0105_A06.b : CTCCAACAACTCACTGACCAGTGTTCCCGAGGGGCTCTGGGCATCCTTGGGAAAGGCTGC
20110601C-001978 : CGGCAACATGAAGGTTGGTTTTGACATCTCAGGGAACCCCTGGATCTGTGACCAGAAACT
---------+---------+---------+---------+---------+---------+ 751
LVRM1_0056_B02.b : CGGCAACATGAAGGTTGGTTTTGACATCTCAGGGCACCCCTGGttc
OVRM1_0202_A11.b : CGGCAACATGAAGGTTGGTTTTGGCATCTCAGGGAACCCCTGTATCTGTGACCAGAAACT
LVRM1_0063_D06.b : CGGNCACATGAAGGTTGGTTTTGACGTCTCAAGGAAACCCTGGATCTGTGACCAGAAACT
LNG01_0079_D02.b : CGGCAACATGAANGTTGGTTTTGACATCTCAGGGAACCCCTGGATCTGTGACCAGAAACT
LVRM1_0097_F08.b : CCGCAACATGAAGGTTGGTTTTGcatctcagggaaccctggatctgtgaccgaaactan
LVRM1_0195_H02.b : CGGCNACATGAAGGTTGGTTTTGACATCTCAGGNAACCCCT
LVRM1_0041_H11.b : CGGCAACATGAAAGTTGGTTTTGACATCTCAGGGAACCCCTGGATCTGTGACCAGAAACT
LVRM1_0077_A10.b : CGGCAACATGAAGGTTGGTTTTGACATCTCANGGAACCCCTGGATCTGTGACCAGAAACT
LVR01_0105_A06.b : CGGCAACATGAAGGTTGGTTTTGACATCTCAGGGAACCCCTGGATCTGTGACCAGAAACT
20110601C-001978 : AGATGACCTCTATCGGTGGCTTGTGGCCAACGAAGACAAGATGTTTTTCCAGAACAACAC
---------+---------+---------+---------+---------+---------+ 811
LVRM1_0056_B02.b :
OVRM1_0202_A11.b : AGATGACCTCTATCGGTGGCTTGTGGCCAACGAAGA
LVRM1_0063_D06.b : AGATGACCTCTATCGGTGGCTTGTGGCCAACGAAGACACGATGTTTT
LNG01_0079_D02.b : AGATGACCTCTATCGGTGGCTTGTGGCCAACGAAGACAAGATGTTTTTTCAGAACAACAC
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b : AGATn
LVRM1_0077_A10.b : AGATGACCTCTATCGGT
LVR01_0105_A06.b : AGATGACCTCTATCGGTGGCTTGTGGCCAACGAAGACAAGATGTTTTTCCAGAACAACAC
20110601C-001978 : TCACTGTGCTGGCCCCAAAGCCTTGGAGGGCCAGACGCTCCTGGCAGTGGCTGCGTCTCT
---------+---------+---------+---------+---------+---------+ 871
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : TCACTGTGCTGGCCCCAAGCCTTTGGAGG*CCAGACGCTCCTGGCAGTGGCTGCGTCTCT
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b : TCACTGTGCTGGCCCCAAAGCCTTGGAGGGCCAGACGCTCCTGGCAGTGGCTGCGTCTCT
20110601C-001978 : TGAGGCCTAGGGCTAGGGTTAGGGTGGGG...............................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : TTGAGCCTAGGGCTAGGGTTAGGGTGGGGgaggccgggtttnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b : TGAGGCCTANGGCTAGGGTagggttggggagggggcggggtttgggcaaaacaccacacc
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b : cccctaaaatatttccccctttctaagggtgtgaagactggggaccaccccatagtttgc
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b : tgggggccccctggtcgctcacgccctcccacccttgggcctccttcctggccttccttg
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b : gctggttgcttcaaagctggtaatcccccctttcccaaaaaatggcccttttccctcccc
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b : ttttttcccccaaaatttcttttttggggttccctcccgggggccttttccccccccccc
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b : ccttgggggccccccggggggccccccccacccccacccgggggggggggggggtgttg
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b :
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b :
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b :
20110601C-001978 : ............................................................
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0056_B02.b :
OVRM1_0202_A11.b :
LVRM1_0063_D06.b :
LNG01_0079_D02.b : nnnnnnnn
LVRM1_0097_F08.b :
LVRM1_0195_H02.b :
LVRM1_0041_H11.b :
LVRM1_0077_A10.b :
LVR01_0105_A06.b :