Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-002479

Sequence: [FASTA format sequence] CTTCAGACGC CAGTGGATCT GCAGCTGTTG ACTGCGCCCG CCGCAGATCT TTGAAGCATG AATCCTTCAC TCCTCCTGGC TGCCTTTTGC TTGGGAATAG CCTCAGCTGC TCCAAGACAT GATCACAGTT TAGATGCAGA CTGGTACAAG TGGAAGGCAA CACACAGGAA ACTCTATGGC TTGAATGAAG AAGGAAGGCG GAGAGCCATA TGGGAGAAGA ACATGAAAAT GATTGAACGA CACAATTGGG AACACAGGCA AGGGAAACAT AGCTTCACCA TGGCCATGAA TGCCTTTGGT GACATGACCA ATGAAGAATT CAGGAAGACG ATGAATGGTT TTCAAAACCA GAAGCACAAG AAGGGAAAAG TATTCCTTGA CGCTGGCTCT GCTTTGACCC CCCATTCTGT GGATTGGAGA GAGAAAGGCT ATGTAACTGC TGTGAAGAAT CAGGGTCACT GTGGTTCTTG TTGGGCTTTT AGTGCCACCG GCGCCCTCGA AGGACAGATG TTCCGGAAAA CCAGCAAACT TATTTCACTG AGTGAGCAGA ACCTGGTGGA CTGCTCTTGG CCTGAGGGCA ATGAGGGCTG CAATGGTGGC CTAATGGATA ATGCCTTCCA GTACATTAAG GACAACGGAG GCCTGGACTC AGAGGAATCC TATCCATACT TTGGAAAGGA TGGATCCTGC AAATACAAGC CCCAGAGTTC TGCTGCCAAC GACACTGGTT ACGTGGATAT TCCAAAGCAG GAGAAAGCGC TTATGAAGGC CGTGGCAACT GTGGGGCCCA TCTCTGTTGG TATAGATGCA AGCCATGAAT CCTTCCAGTT TTACAGCACA GGCATTTATT TTGAACCACA GTGCAGCAGC GAAGACCTGG ATCATGGCGT TCTGGTGGTC GGCTATGGCG TTGAAGGAGC ACACTCAAAT AATAAGTATT GGCTTGTNCA GAACAGCTGG GGTAATACTT GGGGCATGGA TGGCTACATA AAGATGACCA AAGATCAGAA CACCACTGTG GAATCGCCCA CATGGCCAGT TACCCTGTGG TCTAAATCTC NAAGACTGGA TTAGAACAGA ATAGCCCGAG GACAATTCTG TCTTCA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
CTSL1 cathepsin L1 preproprotein [Homo sapiens]. 521 e-148 O

CTSL1 cathepsin L1 preproprotein [Homo sapiens]. 521 e-148 O

CTSL2 cathepsin L2 preproprotein [Homo sapiens]. 494 e-140 O

CTSL2 cathepsin L2 preproprotein [Homo sapiens]. 494 e-140 O

CTSK cathepsin K preproprotein [Homo sapiens]. 320 1e-87 O

CTSS cathepsin S isoform 1 preproprotein [Homo sapiens]. 299 4e-81 O

CTSS cathepsin S isoform 2 preproprotein [Homo sapiens]. 248 9e-66 O

CTSH pro-cathepsin H preproprotein [Homo sapiens]. 223 8e-59 O

CTSF cathepsin F precursor [Homo sapiens]. 174 1e-43

CTSO cathepsin O preproprotein [Homo sapiens]. 144 2e-34 O

Locus	Definition	Score	E value	FL
CTSL1	cathepsin L1 preproprotein [Homo sapiens].	521	e-148	O
CTSL1	cathepsin L1 preproprotein [Homo sapiens].	521	e-148	O
CTSL2	cathepsin L2 preproprotein [Homo sapiens].	494	e-140	O
CTSL2	cathepsin L2 preproprotein [Homo sapiens].	494	e-140	O
CTSK	cathepsin K preproprotein [Homo sapiens].	320	1e-87	O
CTSS	cathepsin S isoform 1 preproprotein [Homo sapiens].	299	4e-81	O
CTSS	cathepsin S isoform 2 preproprotein [Homo sapiens].	248	9e-66	O
CTSH	pro-cathepsin H preproprotein [Homo sapiens].	223	8e-59	O
CTSF	cathepsin F precursor [Homo sapiens].	174	1e-43
CTSO	cathepsin O preproprotein [Homo sapiens].	144	2e-34	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Ctsl cathepsin L1 preproprotein [Mus musculus]. 484 e-138 O

Ctsll3 cathepsin L-like 3 [Mus musculus]. 431 e-121 O

BC051665 hypothetical protein LOC218275 [Mus musculus]. 430 e-121 O

4930486L24Rik testin-2 precursor [Mus musculus]. 407 e-115 O

Cts6 cathepsin 6 [Mus musculus]. 371 e-103 O

Ctsr cathepsin R precursor [Mus musculus]. 364 e-101 O

Cts8 cathepsin 8 [Mus musculus]. 363 e-101 O

Ctsm cathepsin M precursor [Mus musculus]. 363 e-100 O

LOC640171 PREDICTED: cathepsin M-like [Mus musculus]. 357 9e-99 O

Ctsj cathepsin J [Mus musculus]. 353 2e-98 O

Locus	Definition	Score	E value	FL
Ctsl	cathepsin L1 preproprotein [Mus musculus].	484	e-138	O
Ctsll3	cathepsin L-like 3 [Mus musculus].	431	e-121	O
BC051665	hypothetical protein LOC218275 [Mus musculus].	430	e-121	O
4930486L24Rik	testin-2 precursor [Mus musculus].	407	e-115	O
Cts6	cathepsin 6 [Mus musculus].	371	e-103	O
Ctsr	cathepsin R precursor [Mus musculus].	364	e-101	O
Cts8	cathepsin 8 [Mus musculus].	363	e-101	O
Ctsm	cathepsin M precursor [Mus musculus].	363	e-100	O
LOC640171	PREDICTED: cathepsin M-like [Mus musculus].	357	9e-99	O
Ctsj	cathepsin J [Mus musculus].	353	2e-98	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
CTSL2 cathepsin L1 precursor [Canis lupus familiaris]. 536 e-153 O

LOC484140 PREDICTED: similar to Cathepsin L precursor (Major excreted protein) (MEP) [Canis familiaris]. 461 e-130 O

LOC612231 PREDICTED: similar to Cathepsin L2 precursor (Cathepsin V) (Cathepsin U) [Canis familiaris]. 345 3e-96 O

CTSK cathepsin K precursor [Canis lupus familiaris]. 320 2e-87 O

CTSS cathepsin S precursor [Canis lupus familiaris]. 298 8e-81 O

LOC479065 PREDICTED: similar to Cathepsin H precursor [Canis familiaris]. 205 2e-53 O

LOC476010 PREDICTED: similar to Cathepsin F precursor (CATSF) [Canis familiaris]. 171 9e-43

LOC482665 PREDICTED: similar to Cathepsin O precursor [Canis familiaris]. 139 6e-33

LOC483725 PREDICTED: similar to cathepsin W preproprotein [Canis familiaris]. 124 2e-28 O

CTSC dipeptidyl peptidase 1 [Canis lupus familiaris]. 110 2e-24

Locus	Definition	Score	E value	FL
CTSL2	cathepsin L1 precursor [Canis lupus familiaris].	536	e-153	O
LOC484140	PREDICTED: similar to Cathepsin L precursor (Major excreted protein) (MEP) [Canis familiaris].	461	e-130	O
LOC612231	PREDICTED: similar to Cathepsin L2 precursor (Cathepsin V) (Cathepsin U) [Canis familiaris].	345	3e-96	O
CTSK	cathepsin K precursor [Canis lupus familiaris].	320	2e-87	O
CTSS	cathepsin S precursor [Canis lupus familiaris].	298	8e-81	O
LOC479065	PREDICTED: similar to Cathepsin H precursor [Canis familiaris].	205	2e-53	O
LOC476010	PREDICTED: similar to Cathepsin F precursor (CATSF) [Canis familiaris].	171	9e-43
LOC482665	PREDICTED: similar to Cathepsin O precursor [Canis familiaris].	139	6e-33
LOC483725	PREDICTED: similar to cathepsin W preproprotein [Canis familiaris].	124	2e-28	O
CTSC	dipeptidyl peptidase 1 [Canis lupus familiaris].	110	2e-24

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
CTSL2 cathepsin L2 precursor [Bos taurus]. 506 e-144 O

CTSL1 cathepsin L1 [Bos taurus]. 504 e-144 O

CTSK cathepsin K [Bos taurus]. 318 7e-87 O

CTSS cathepsin S precursor [Bos taurus]. 302 3e-82 O

CTSH pro-cathepsin H precursor [Bos taurus]. 214 7e-56 O

CTSF cathepsin F [Bos taurus]. 171 1e-42

CTSO PREDICTED: cathepsin O preproprotein-like [Bos taurus]. 138 1e-32

CTSO PREDICTED: cathepsin O [Bos taurus]. 138 1e-32

CTSC dipeptidyl peptidase 1 [Bos taurus]. 108 8e-24

CTSB cathepsin B precursor [Bos taurus]. 87.4 2e-17 O

Locus	Definition	Score	E value	FL
CTSL2	cathepsin L2 precursor [Bos taurus].	506	e-144	O
CTSL1	cathepsin L1 [Bos taurus].	504	e-144	O
CTSK	cathepsin K [Bos taurus].	318	7e-87	O
CTSS	cathepsin S precursor [Bos taurus].	302	3e-82	O
CTSH	pro-cathepsin H precursor [Bos taurus].	214	7e-56	O
CTSF	cathepsin F [Bos taurus].	171	1e-42
CTSO	PREDICTED: cathepsin O preproprotein-like [Bos taurus].	138	1e-32
CTSO	PREDICTED: cathepsin O [Bos taurus].	138	1e-32
CTSC	dipeptidyl peptidase 1 [Bos taurus].	108	8e-24
CTSB	cathepsin B precursor [Bos taurus].	87.4	2e-17	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100515919 PREDICTED: cathepsin L1-like [Sus scrofa]. 676 0.0 O

CTSL1 cathepsin L1 precursor [Sus scrofa]. 532 e-152 O

CTSK cathepsin K precursor [Sus scrofa]. 318 3e-87 O

LOC100627406 PREDICTED: cathepsin S-like [Sus scrofa]. 294 7e-80 O

LOC100153090 PREDICTED: cathepsin S [Sus scrofa]. 294 7e-80 O

CTSH pro-cathepsin H precursor [Sus scrofa]. 216 6e-57 O

CTSF PREDICTED: cathepsin F [Sus scrofa]. 183 1e-46

LOC100525853 PREDICTED: cathepsin W-like [Sus scrofa]. 135 4e-32 O

TDO PREDICTED: tryptophan 2,3-dioxygenase [Sus scrofa]. 121 8e-28

LOC100522387 PREDICTED: dipeptidyl peptidase 1-like [Sus scrofa]. 104 1e-22

Locus	Definition	Score	E value	FL
LOC100515919	PREDICTED: cathepsin L1-like [Sus scrofa].	676	0.0	O
CTSL1	cathepsin L1 precursor [Sus scrofa].	532	e-152	O
CTSK	cathepsin K precursor [Sus scrofa].	318	3e-87	O
LOC100627406	PREDICTED: cathepsin S-like [Sus scrofa].	294	7e-80	O
LOC100153090	PREDICTED: cathepsin S [Sus scrofa].	294	7e-80	O
CTSH	pro-cathepsin H precursor [Sus scrofa].	216	6e-57	O
CTSF	PREDICTED: cathepsin F [Sus scrofa].	183	1e-46
LOC100525853	PREDICTED: cathepsin W-like [Sus scrofa].	135	4e-32	O
TDO	PREDICTED: tryptophan 2,3-dioxygenase [Sus scrofa].	121	8e-28
LOC100522387	PREDICTED: dipeptidyl peptidase 1-like [Sus scrofa].	104	1e-22

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

DCI01 0005 D12 DCI01_0005_D12.b DB790921
DCI01 0009 H08 DCI01_0009_H08.b DB791154
DCI01 0043 H03 DCI01_0043_H03.b DB794060
DCI01 0080 B03 DCI01_0080_B03.b DB796643
DCI01 0107 D07 DCI01_0107_D07.b DB799053
TCH01 0098 B06 TCH01_0098_B06.b CJ029584 AK399353

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
240 A 3 0 0.600 W S CGA/R
G 2 0 0.400 CGG/R

Alignment: TOP

20110601C-002479 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
TCH01_0098_B06.b :                                                             
DCI01_0009_H08.b : aatctatggctatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0005_D12.b :                tttcgtacgatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0043_H03.b :                                                             
DCI01_0107_D07.b :                                                             
DCI01_0080_B03.b :                                                             


20110601C-002479 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
TCH01_0098_B06.b :                      nnggctaggactatgacxxxxxxxxxxxxxxxxxxxxxx
DCI01_0009_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0005_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0043_H03.b :                                                             
DCI01_0107_D07.b :                                                             
DCI01_0080_B03.b :                                                             


20110601C-002479 : ..........................................CTTCAGACGCCAGTGGAT
                   ---------+---------+---------+---------+---------+---------+ 18
TCH01_0098_B06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTCAGACGCCAGTGGAT
DCI01_0009_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCAGACGCCAGTGGAT
DCI01_0005_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGGAT
DCI01_0043_H03.b :                                                gtaactaaxxxxx
DCI01_0107_D07.b :                                                             
DCI01_0080_B03.b :                                                             


20110601C-002479 : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
                   ---------+---------+---------+---------+---------+---------+ 78
TCH01_0098_B06.b : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
DCI01_0009_H08.b : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
DCI01_0005_D12.b : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
DCI01_0043_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0107_D07.b :   nnnggtaaaannnnaccgatatcttagggctxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0080_B03.b :                                                             


20110601C-002479 : GCTGCCTTTTGCTTGGGAATAGCCTCAGCTGCTCCAAGACATGATCACAGTTTAGATGCA
                   ---------+---------+---------+---------+---------+---------+ 138
TCH01_0098_B06.b : GCTGCCTTTTGCTTGGGAATAGCCTCAGCTGCTCCAAGACATGATCACAGTTTAGATGCA
DCI01_0009_H08.b : GCTGCCTTTTGCTTGGGAATAGCCTCAGCTGCTCCAAGACATGATCACAGTTTAGATGCA
DCI01_0005_D12.b : GCTGCCTTTTGCTTGGGAATAGCCTCAGCCGCTCCAAGACATGATCACAGTTTAGATGCA
DCI01_0043_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0107_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0080_B03.b :                 nggcgaaaannnnnccgatacataxxxxxxxxxxxxxxxxxxxx


20110601C-002479 : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
                   ---------+---------+---------+---------+---------+---------+ 198
TCH01_0098_B06.b : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0009_H08.b : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0005_D12.b : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0043_H03.b : xxxxxxxxxxxxxxxxxxxxAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0107_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAGGAAGG
DCI01_0080_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-002479 : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
                   ---------+---------+---------+---------+---------+---------+ 258
TCH01_0098_B06.b : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
DCI01_0009_H08.b : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
DCI01_0005_D12.b : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
DCI01_0043_H03.b : CGGAGAGCCGTATGGGAGAAGAACATGAAAATGATTGAACGGCACAATTGGGAACACAGG
DCI01_0107_D07.b : CGGAGAGCCGTATGGGAGAAGAACATGAAAATGATTGAACGGCACAATTGGGAACACAGG
DCI01_0080_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-002479 : CAAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
                   ---------+---------+---------+---------+---------+---------+ 318
TCH01_0098_B06.b : CAAGGGAAACATAGCTTCACCATGGCCACGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0009_H08.b : CAAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0005_D12.b : CAAGGGAAACATAGCTTCACCATGGCCATGAGCGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0043_H03.b : CAAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0107_D07.b : CGAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0080_B03.b : xxxxxxAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA


20110601C-002479 : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
                   ---------+---------+---------+---------+---------+---------+ 378
TCH01_0098_B06.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0009_H08.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0005_D12.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0043_H03.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0107_D07.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0080_B03.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT


20110601C-002479 : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
                   ---------+---------+---------+---------+---------+---------+ 438
TCH01_0098_B06.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0009_H08.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0005_D12.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0043_H03.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0107_D07.b : GACGCTGGCTCTGCTCTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0080_B03.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT


20110601C-002479 : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
                   ---------+---------+---------+---------+---------+---------+ 498
TCH01_0098_B06.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0009_H08.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0005_D12.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0043_H03.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0107_D07.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0080_B03.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC


20110601C-002479 : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
                   ---------+---------+---------+---------+---------+---------+ 558
TCH01_0098_B06.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0009_H08.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0005_D12.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0043_H03.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0107_D07.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0080_B03.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG


20110601C-002479 : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
                   ---------+---------+---------+---------+---------+---------+ 618
TCH01_0098_B06.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0009_H08.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATTATGCCTTC
DCI01_0005_D12.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0043_H03.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0107_D07.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0080_B03.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC


20110601C-002479 : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
                   ---------+---------+---------+---------+---------+---------+ 678
TCH01_0098_B06.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0009_H08.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0005_D12.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0043_H03.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0107_D07.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0080_B03.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG


20110601C-002479 : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
                   ---------+---------+---------+---------+---------+---------+ 738
TCH01_0098_B06.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
DCI01_0009_H08.b : GATGGATCCTGCAAATTACAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
DCI01_0005_D12.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
DCI01_0043_H03.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGAAT
DCI01_0107_D07.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCCACGACACTGGTTACGTGGAT
DCI01_0080_B03.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT


20110601C-002479 : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGGCCCATCTCTGTT
                   ---------+---------+---------+---------+---------+---------+ 798
TCH01_0098_B06.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGACCCATCTCTGTT
DCI01_0009_H08.b : ATTCCAAAGCAAGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGACCCATCTCTGTT
DCI01_0005_D12.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGACCCATCTCTGTT
DCI01_0043_H03.b : ATTCC*AAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGGCCCATCTCTGTT
DCI01_0107_D07.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCCGTGGCACTGTGGGGCCCATCTCTGTT
DCI01_0080_B03.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGGCCCATCTCTGTT


20110601C-002479 : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAACCA
                   ---------+---------+---------+---------+---------+---------+ 858
TCH01_0098_B06.b : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAAACA
DCI01_0009_H08.b : GGTATAGATGCAAGCCATGTATCCTTTCAGTTTTACAGCACCAGCTTTTATTTGGAACac
DCI01_0005_D12.b : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAACCA
DCI01_0043_H03.b : GGTATAGATGCAAGCCATGAATCCTT*CAGTTTTACAGCACAGGCATTTATTTGGAT*CA
DCI01_0107_D07.b : GGTATAGATGCCAGCCATGAATCCCTTCCGTTTTACAGCACAGGCATTTATTTTGAACCA
DCI01_0080_B03.b : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAACCA


20110601C-002479 : CAGTGCAGCAGCGAAGACCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTTGAAGGA
                   ---------+---------+---------+---------+---------+---------+ 918
TCH01_0098_B06.b : CAGTGCAGCAGCGAAGATCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTtgaagga
DCI01_0009_H08.b : agtgcancaacaaaatctggatcatgcgtttcgggggtcggcctttgcgttgaaggacac
DCI01_0005_D12.b : CAGTGCAGCAGCGAAGATCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTttgaaga
DCI01_0043_H03.b : CAGTGCAGCAGCGAAGACCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTttaaagg
DCI01_0107_D07.b : CAGTGCAGCAGCGA*GAACTGGATCATGGCGTTCTGGTGGTCGGCTATGGgcgtgaagga
DCI01_0080_B03.b : CAGTGCAGCAGCGAAGACCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTTGAAGGA


20110601C-002479 : GCACACTCAAATAATAAGTATTGGCTTGTNCAGAACAGCTGGGGTAATACTTGGGGCATG
                   ---------+---------+---------+---------+---------+---------+ 978
TCH01_0098_B06.b : gcacactcaaataatagtattggctggtcagaacgctggggtatacttggggcatggatg
DCI01_0009_H08.b : ctcaaatattagttttggctgcaaaaacgctggggaatactgtgggcaggatgcttctta
DCI01_0005_D12.b : acaccctcaaataataattattggcttgtcaagaacagctgggggtatacttgggggcat
DCI01_0043_H03.b : accccctcaaataataagtatgggcttgtccagaacagctggggtaatacttgggggctg
DCI01_0107_D07.b : acccccctcaataataagtattggcttgtccagaacagctggggtaatacttgggggctg
DCI01_0080_B03.b : GCACACTCAAATAATAAGTATTGGCTTGTNCAGAACAGCTGGGGTAATACTTGGGGCATG


20110601C-002479 : GATGGCTACATAAAGATGACCAAAGATCAGAACACCACTGTGGAATCGCCCACATGGCCA
                   ---------+---------+---------+---------+---------+---------+ 1038
TCH01_0098_B06.b : gcttctaagatgaccaagatcgaacaacactgtggaaccgccccatgcccagtacccggg
DCI01_0009_H08.b : agatgaccaagatccaactccctgtgcaatcccccctggcccgttcctggggtctaactc
DCI01_0005_D12.b : ggatggctccttaaaatggaccaaagatccgaaccacccccggtggaatccccaccatgg
DCI01_0043_H03.b : gatggcttcctaagatgaaccaagattcggaccacccctggggaatcccccctgggcccg
DCI01_0107_D07.b : aatgcctcctaaagatgaccaagatcagaccacccctgggaatcgccccctgccagttac
DCI01_0080_B03.b : GATGGCTACATAAAGATGACCAAAGATCAGAACACCACTGTGGAATCGCCCACATGGCCA


20110601C-002479 : GTTACCCTGTGGTCTAAATCTCNAAGACTGGATTAGAACAGAATAGCCCGAGGACAATTC
                   ---------+---------+---------+---------+---------+---------+ 1098
TCH01_0098_B06.b : gtcaaatctcaagaatggaataggaccaattacccgaggacaaattttcttcaaccaaca
DCI01_0009_H08.b : caagagggattaaacaaaagccccggaatattttctccaacccccaacttttggtgggga
DCI01_0005_D12.b : gccattacccctggggtctaatccccaaaacgggaataaaaacgaaaatacccgaggaaa
DCI01_0043_H03.b : tacccggggggccaaatcccaaaaagggaataaaaacaaaataccccaggaatattctgt
DCI01_0107_D07.b : ctgggggccaaatcaaagaactgataagacaaaaaccccaggaaattcgtcttcaaccac
DCI01_0080_B03.b : GTTACCCTGTGGTCTAAATCTCNAAGACTGGATTAGAACAGAATAGCCCGAGGACAATTC


20110601C-002479 : TGTCTTCA....................................................
                   ---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b : gaatctttggggggatcaaccttgaacttaagatcaattggattgaattcggcctttaac
DCI01_0009_H08.b : caaccttgaacattaggaccaattgttttgaatctgccctttaaggggaaattccctctt
DCI01_0005_D12.b : aattccgttcttcaaccc                                         
DCI01_0043_H03.b : ttttaaacaaccaaatttttgtggggggatccacacttgaacccttggagaccaggtggg
DCI01_0107_D07.b : caaccctatggggggaccacccttgatcttgagatccagtgggatggaatcgggccttta
DCI01_0080_B03.b : TGTCTTCAaccnancagactctattgtgtgggatcaacactttgatcattgangatccnn


20110601C-002479 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b : tggggaagttccactttttatcgggggaaaaggtggggataaaggcccaaattgacttcc
DCI01_0009_H08.b : ttatagggaaaggtggggggacggctaatattgtcttgggtggagggtggtctcctttat
DCI01_0005_D12.b :                                                             
DCI01_0043_H03.b : tttgaattcgggccccttttaccgggggaaagttcccctttctttaatccggggaaaaag
DCI01_0107_D07.b : ccccgggaacttccccttcttattcggtggaaaaggtgggggatgagggccccaaattgc
DCI01_0080_B03.b : agtgtgattgaatctgtgccatttanctggtgaaatgtaccactcttnanntactgtgna


20110601C-002479 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b : gtttaaggggtaaagttccttaaaaaactttttggaaaaaaaaa               
DCI01_0009_H08.b : aaagtttagaacaaaaaaaagaaagcctcg                             
DCI01_0005_D12.b :                                                             
DCI01_0043_H03.b : agttggagaggaggagtccaaaaatttgcctttccggtgtataaggagtaaaagtttttc
DCI01_0107_D07.b : cctccggtttaaagaggtaaatttccctttaaaaattttttgggttccaaaaaaaaaaaa
DCI01_0080_B03.b : aatagttggtgatgaggtgccaaaaattngactttcangttaaaaagagataagtttacc


20110601C-002479 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b :                                                             
DCI01_0009_H08.b :                                                             
DCI01_0005_D12.b :                                                             
DCI01_0043_H03.b : ctttaaaacctttttttggaaaaaannnannaactaaaanaanatgtacctcancaacaa
DCI01_0107_D07.b : aaaaaagggggccccgcctcaaattaacacttgggcgcgcccaaagaaggaaattctcaa
DCI01_0080_B03.b : ttttaaaaactaatttaggcaaaaaaaaaaaaaaaaaaaactgtcgcccccggcctcaaa


20110601C-002479 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b :                                                             
DCI01_0009_H08.b :                                                             
DCI01_0005_D12.b :                                                             
DCI01_0043_H03.b : aaataantaaatatttaggacacctacccttttctctcttctca               
DCI01_0107_D07.b : acgccgaggggtctcaaacccgccccgcaaaagagtggtgtttagaggcccaaccccccc
DCI01_0080_B03.b : ttttaaccatcttggccgggccaagaaagaaagcaacgttccagaaccgccaaagggtgt


20110601C-002479 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b :                                                             
DCI01_0009_H08.b :                                                             
DCI01_0005_D12.b :                                                             
DCI01_0043_H03.b :                                                             
DCI01_0107_D07.b : cctttttttttaaaaaaaaaacnctctttgaaactccactccatatctctt        
DCI01_0080_B03.b : tcccaaaaacgcgggcaggttaaacaagtttgggttgtttaaagacagccta