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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-002630

Length: 1,424

Sequence [FASTA format sequence]
GTGTCTGACT TCTACGACAT TGAAGAGAGA CTAGGATCTG GGAAATTTGG ACAGGTCTTC
CGACTTGTAG AGAAGAAAAC TGGAAAAATC TGGGCAGGGA AATTCTTCAA GGCGTATTCA
GCAAAAGAGA AAGAGAACAT CCGGCAGGAG ATCAGCATCA TGAACTGCCT CCACCACCCC
AAGCTGGTCC AGTGTGTGGA CGCCTTCGAA GAGAAGGCCA ACATCGTCAT GGTCCTGGAG
ATCGTGTCCG GGGGCGAGCT GTTCGAGCGC ATCATTGACG AGGACTTTGA GCTGACGGAG
CGCGAGTGCA TCAAGTACAT GCGGCAGATC TCGGAGGGGG TGGAGTACAT CCACAAGCAG
GGCATCGTCC ACCTGGACCT CAAGCCTGAG AACATCATGT GTGTCAACAA GACGGGCACC
CGGATCAAGC TCATCGACTT CGGTCTGGCC CGGCGGCTGG AGAATGCGGG GTCTCTGAAG
GTCCTCTTTG GCACCCCGGA GTTTGTGGCG CCTGAAGTGA TCAACTATGA GCCCATTGGC
TATGCCACGG ACATGTGGAG CATCGGGGTC ATCTGCTACA TCCTGGTCAG TGGACTGTCC
CCCTTTATGG GTGACAACGA TAACGAGACC TTAGCCAACG TTACCTCAGC CACCTGGGAC
TTCGACGATG AGGCCTTCGA TGAGATCTCC GACGACGCCA AGGATTTCAT CAGCAATTTA
CTGAAGAAAG ATATGAAAAA CCGCTTGGAC TGCACCCAGT GCCTCCAGCA CCCATGGCTA
ATGAAAGATA CCAAGAACAT GGAGGCCAAG AAGCTCTCCA AGGACCGGAT GAAAAAGTAC
ATGGCAAGGA GGAAATGGCA GAAAACGGGC AATGCTGTGA GAGCCATTGG AAGACTGTCC
TCTATGGCAA TGATCTCAGG GCTCAGTGGC AGGAAATCCT CAACAGGGTC ACCAACCAGC
CCGCTGAATG CAGAAAAATT AGAATCTGAA GAAGATGTCT CCCAAGCTTT CCTTGAGGCC
GTCGCTGAGG AAAAGCCCCA TGTAAAACCC TATTTTTCTA AGACCATTCG TGATTTAGAA
GTTGTGGAGG GAAGCGCTGC TAGATTTGAC TGCAAGATTG AAGGATACCC AGACCCTGAG
GTTGTCTGGT TCAAAGATGA CCAGTCAATC AGGGAGTCCC GCCACTTCCA GATAGACTAC
GATGAGGATG GGAACTGCTC TTTAATCATT AGCGATGTCT GCGGTGATGA TGATGCCAAG
TACACCTGCA AGGCTGTCAA CAGTCTTGGA GAAGCACCTG CACAGCAGAG CTCATTGTGG
AAACATGGAG AAAGAGAAGG GGAAGGGGAA GAAGAAGAGA GAGAAGAAGT GACCAAAGCC
AAGGAGAGCA GTTTCTAAGT CAGATTACAA GACTATTTCT CTAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMYLKmyosin light chain kinase, smooth muscle isoform 2 [Homo sapiens]. 8720.0
Contig/Assembly ProteinMYLKmyosin light chain kinase, smooth muscle isoform 1 [Homo sapiens]. 8720.0
Contig/Assembly ProteinMYLKmyosin light chain kinase, smooth muscle isoform 3A [Homo sapiens]. 7460.0
Contig/Assembly ProteinMYLKmyosin light chain kinase, smooth muscle isoform 3B [Homo sapiens]. 7460.0
Contig/Assembly ProteinMYLK3putative myosin light chain kinase 3 [Homo sapiens]. 3141e-85
Contig/Assembly ProteinMYLK2myosin light chain kinase 2, skeletal/cardiac muscle [Homo sapiens]. 3081e-83
Contig/Assembly ProteinMYLK4myosin light chain kinase family member 4 [Homo sapiens]. 2972e-80
Contig/Assembly ProteinDAPK1death-associated protein kinase 1 [Homo sapiens]. 2763e-74
Contig/Assembly ProteinMYLKmyosin light chain kinase, smooth muscle isoform 8 [Homo sapiens]. 2683e-72O
Contig/Assembly ProteinDAPK2death-associated protein kinase 2 [Homo sapiens]. 2664e-71


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMylkmyosin light chain kinase, smooth muscle [Mus musculus]. 8700.0
Contig/Assembly ProteinMylk2myosin light chain kinase 2, skeletal/cardiac muscle [Mus musculus]. 3089e-84
Contig/Assembly ProteinMylk3putative myosin light chain kinase 3 [Mus musculus]. 3085e-84
Contig/Assembly ProteinMylk4myosin light chain kinase family member 4 [Mus musculus]. 3002e-81
Contig/Assembly ProteinDapk1death-associated protein kinase 1 [Mus musculus]. 2763e-74
Contig/Assembly ProteinDapk1death-associated protein kinase 1 [Mus musculus]. 2763e-74
Contig/Assembly ProteinDapk2death-associated protein kinase 2 [Mus musculus]. 2719e-73
Contig/Assembly ProteinTtntitin isoform N2-B [Mus musculus]. 2633e-70
Contig/Assembly ProteinDapk3death-associated protein kinase 3 [Mus musculus]. 2633e-70
Contig/Assembly ProteinTtntitin isoform N2-A [Mus musculus]. 2633e-70


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 2 isoform 8 [Canis familiaris]. 8530.0
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 1 isoform 2 [Canis familiaris]. 8530.0
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 1 isoform 7 [Canis familiaris]. 8480.0
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 1 isoform 3 [Canis familiaris]. 7460.0
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 3B isoform 4 [Canis familiaris]. 7260.0
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 3A isoform 5 [Canis familiaris]. 7260.0
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 1 isoform 6 [Canis familiaris]. 7080.0
Contig/Assembly ProteinLOC488012PREDICTED: similar to myosin light chain kinase isoform 1 isoform 1 [Canis familiaris]. 373e-103
Contig/Assembly ProteinLOC477187PREDICTED: similar to skeletal myosin light chain kinase [Canis familiaris]. 3094e-84
Contig/Assembly ProteinLOC475345PREDICTED: similar to cardiac-MyBP-C associated Ca/CaM kinase [Canis familiaris]. 3071e-83


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMYLKmyosin light chain kinase, smooth muscle [Bos taurus]. 8660.0
Contig/Assembly ProteinMYLK3PREDICTED: myosin light chain kinase 3 [Bos taurus]. 3103e-84
Contig/Assembly ProteinMYLK2myosin light chain kinase 2, skeletal/cardiac muscle [Bos taurus]. 3086e-84
Contig/Assembly ProteinMYLK4PREDICTED: myosin light chain kinase 2, skeletal/cardiac muscle-like [Bos taurus]. 2903e-78
Contig/Assembly ProteinDAPK1PREDICTED: Death-associated protein kinase 1-like, partial [Bos taurus]. 2756e-74
Contig/Assembly ProteinMYLK4PREDICTED: skeletal myosin light chain kinase-like [Bos taurus]. 2759e-74
Contig/Assembly ProteinDAPK1death-associated protein kinase 1 [Bos taurus]. 2756e-74
Contig/Assembly ProteinDAPK2PREDICTED: death-associated protein kinase 3-like [Bos taurus]. 2672e-71
Contig/Assembly ProteinTTNPREDICTED: titin [Bos taurus]. 2626e-70
Contig/Assembly ProteinTTNPREDICTED: titin [Bos taurus]. 2626e-70


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMYLKPREDICTED: myosin light chain kinase, smooth muscle [Sus scrofa]. 395e-110
Contig/Assembly ProteinMYLKPREDICTED: myosin light chain kinase, smooth muscle isoform 1 [Sus scrofa]. 385e-108O
Contig/Assembly ProteinMYLK2PREDICTED: LOW QUALITY PROTEIN: myosin light chain kinase 2, skeletal/cardiac muscle [Sus scrofa]. 3084e-84
Contig/Assembly ProteinLOC100157526PREDICTED: hypothetical protein LOC100157526 [Sus scrofa]. 2841e-76
Contig/Assembly ProteinLOC100516288PREDICTED: death-associated protein kinase 1-like [Sus scrofa]. 2731e-73
Contig/Assembly ProteinLOC100519519PREDICTED: titin-like [Sus scrofa]. 2655e-71
Contig/Assembly ProteinDAPK2death-associated protein kinase 2 [Sus scrofa]. 2655e-71
Contig/Assembly ProteinLOC100624415PREDICTED: LOW QUALITY PROTEIN: death-associated protein kinase 3-like [Sus scrofa]. 2615e-70
Contig/Assembly ProteinMYLKPREDICTED: myosin light chain kinase, smooth muscle isoform 2 [Sus scrofa]. 2612e-70O
Contig/Assembly ProteinCAMK1calcium/calmodulin-dependent protein kinase type 1 [Sus scrofa]. 2233e-58


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
BKFL10008C09BKFL1_0008_C09.bFS648400 
BKFL10008E04BKFL1_0008_E04.bFS648416 
KDN010098B09KDN01_0098_B09.bFS678209 
OVRM10004F02OVRM1_0004_F02.bBP459482 AK234670
OVRT10135G11OVRT1_0135_G11.bHX237653 
PST010055B04PST01_0055_B04.bFS701164 
SPL010056H03SPL01_0056_H03.bCJ018093 AK237523
UTR010008C07UTR01_0008_C07.bBP170696 AK398552

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
302A200.400WNCAC/H
G210.600CGC/R
368G200.333WNGGC/G
T310.667GTC/V


Alignment:      TOP

20110601C-002630 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPL01_0056_H03.b : nnnnggctaggactatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : nnnttacataannnnnnggatatctaagggctgctcccgcgccgxxxxxxxxxxxxxxx
BKFL1_0008_C09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxx
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b :
PST01_0055_B04.b :
20110601C-002630 : .............................GTGTCTGACTTCTACGACATTGAAGAGAGAC
---------+---------+---------+---------+---------+---------+ 31
SPL01_0056_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGTCTGACTTCTACGACATTGAAGAGAGAC
OVRM1_0004_F02.b : agttgtcxxxxxxxxxxxxxxxxx
BKFL1_0008_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BKFL1_0008_C09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b :
PST01_0055_B04.b :
20110601C-002630 : TAGGATCTGGGAAATTTGGACAGGTCTTCCGACTTGTAGAGAAGAAAACTGGAAAAATCT
---------+---------+---------+---------+---------+---------+ 91
SPL01_0056_H03.b : TAGGATCTGGGAAATTTGGACAGGTCTTCCGACTTGTAGAGAAGAAAACTGGAAAAATCT
OVRM1_0004_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTAGAGAAGAAAACTGGAAAAATCT
BKFL1_0008_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAAAATCT
BKFL1_0008_C09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAAAATCT
OVRT1_0135_G11.b : nnna
UTR01_0008_C07.b :
KDN01_0098_B09.b :
PST01_0055_B04.b :
20110601C-002630 : GGGCAGGGAAATTCTTCAAGGCGTATTCAGCAAAAGAGAAAGAGAACATCCGGCAGGAGA
---------+---------+---------+---------+---------+---------+ 151
SPL01_0056_H03.b : GGGCAGGGAAATTCTTCAAGGCGTATTCAGCAAAAGAGAAAGAGAACATCCGGCAGGAGA
OVRM1_0004_F02.b : GGGCAGGGAAATTCTTCAAGGCGTATTCAGCAAAAGAGAAAGAGAACATCCGGCAGGAGA
BKFL1_0008_E04.b : GGGCAGGGAAATTCTTCAAGGCGTATTCAGCAAAAGAGAAAGAGAACATCCGGCAGGAGA
BKFL1_0008_C09.b : GGGCAGGGAAATTCTTCAAGGCGTATTCAGCAAAAGAGAAAGAGAACATCCGGCAGGAGA
OVRT1_0135_G11.b : atattcannnnnnnnccgtttgcgttcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0008_C07.b :
KDN01_0098_B09.b :
PST01_0055_B04.b :
20110601C-002630 : TCAGCATCATGAACTGCCTCCACCACCCCAAGCTGGTCCAGTGTGTGGACGCCTTCGAAG
---------+---------+---------+---------+---------+---------+ 211
SPL01_0056_H03.b : TCAGCATCATGAACTGCCTCCACCACCCCAAGCTGGTCCAGTGTGTGGACGCCTTCGAAG
OVRM1_0004_F02.b : TCAGCATCATGAACTGCCTCCACCACCCCAAGCTGGTCCAGTGTGTGGACGCCTTCGAAG
BKFL1_0008_E04.b : TCAGCATCATGAACTGCCTCCACCACCCCAAGCTGGTCCAGTGTGTGGACGCCTTCGAAG
BKFL1_0008_C09.b : TCAGCATCATGAACTGCCTCCACCACCCCAAGCTGGTCCAGTGTGTGGACGCCTTCGAAG
OVRT1_0135_G11.b : xxxxxxxxxxxxxxxxxxxxxxxttctttctggggaagagtgaggccagcaggcaccccc
UTR01_0008_C07.b :
KDN01_0098_B09.b :
PST01_0055_B04.b :
20110601C-002630 : AGAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCCGGGGGCGAGCTGTTCGAGCGCA
---------+---------+---------+---------+---------+---------+ 271
SPL01_0056_H03.b : AGAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCCGGGGGCGAGCTGTTCGAGCGCA
OVRM1_0004_F02.b : AGAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCCGGGGGCGAGCTGTTCGAGCGCA
BKFL1_0008_E04.b : AGAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCCGGGGGCGAGCTGTTCGAGCGCA
BKFL1_0008_C09.b : AGAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCCGGGGGCGAGCTGTTCGAGCGCA
OVRT1_0135_G11.b : agccagaggagggaccgtctccgctcactccCGTGTCCGGGGGCGAGCTGTTCGAGCGCA
UTR01_0008_C07.b : ttttagttgxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0098_B09.b :
PST01_0055_B04.b :
20110601C-002630 : TCATTGACGAGGACTTTGAGCTGACGGAGCGCGAGTGCATCAAGTACATGCGGCAGATCT
---------+---------+---------+---------+---------+---------+ 331
SPL01_0056_H03.b : TCATTGACGAGGACTTTGAGCTGACGGAGCGCGAGTGGATCAAGTACATGCGGCAGATCT
OVRM1_0004_F02.b : TCATTGACGAGGACTTTGAGCTGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGATCT
BKFL1_0008_E04.b : TCATTGACGAGGACTTTGAGCTGACGGAGCACGAGTGCATCAAGTACATGCGGCAGATCT
BKFL1_0008_C09.b : TCATTGACGAGGACTTTGAGCTGACGGAGCACGAGTGCATCAAGTACATGCGGCAGATCT
OVRT1_0135_G11.b : TCATTGACGAGGACTTTGAGCTGACGGAGCGCGAGTGCATCAAGTACATGCGGCAGATCT
UTR01_0008_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGCGGCAGATCT
KDN01_0098_B09.b :
PST01_0055_B04.b :
20110601C-002630 : CGGAGGGGGTGGAGTACATCCACAAGCAGGGCATCGTCCACCTGGACCTCAAGCCTGAGA
---------+---------+---------+---------+---------+---------+ 391
SPL01_0056_H03.b : CGGAGGGGGTGGAGTACATCCACAAGCAGGGCATCGTCCACCTGGACCTCAAGCCTGAGA
OVRM1_0004_F02.b : CGGAGGGGGTGGAGTACATCCACAAGCAGGGCATCGTCCACCTGGACCTCAAGCCTGAGA
BKFL1_0008_E04.b : CGGAGGGGGTGGAGTACATCCACAAGCAGGGCATCGGCCACCTGGACCTCAAGCCTGAGA
BKFL1_0008_C09.b : CGGAGGGGGTGGAGTACATCCACAAGCAGGGCATCGGCCACCTGGACCTCAAGCCTGAGA
OVRT1_0135_G11.b : CGGAGGGGGTGGAGTACATCCACAAGCAGGGCATCGTCCACCTGGACCTCAAGCCTGAGA
UTR01_0008_C07.b : CGGAGGGGGTGGAGTACATCCACAAGCAGGGCATCGTCCACCTGGACCTCAAGCCTGAGA
KDN01_0098_B09.b : nnnnncctgcgttggctntggatgtccCCTGGACCTCAAGCCTGAGA
PST01_0055_B04.b : nnnncccgctgtg
20110601C-002630 : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
---------+---------+---------+---------+---------+---------+ 451
SPL01_0056_H03.b : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
OVRM1_0004_F02.b : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
BKFL1_0008_E04.b : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
BKFL1_0008_C09.b : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
OVRT1_0135_G11.b : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
UTR01_0008_C07.b : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
KDN01_0098_B09.b : ACATCATGTGTGTCAACAAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
PST01_0055_B04.b : gctctggctgtgtgtcacAGACGGGCACCCGGATCAAGCTCATCGACTTCGGTCTGGCCC
20110601C-002630 : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
---------+---------+---------+---------+---------+---------+ 511
SPL01_0056_H03.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
OVRM1_0004_F02.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
BKFL1_0008_E04.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
BKFL1_0008_C09.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
OVRT1_0135_G11.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
UTR01_0008_C07.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
KDN01_0098_B09.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
PST01_0055_B04.b : GGCGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCGGAGTTTGTGGCGC
20110601C-002630 : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
---------+---------+---------+---------+---------+---------+ 571
SPL01_0056_H03.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
OVRM1_0004_F02.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
BKFL1_0008_E04.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
BKFL1_0008_C09.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
OVRT1_0135_G11.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
UTR01_0008_C07.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
KDN01_0098_B09.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
PST01_0055_B04.b : CTGAAGTGATCAACTATGAGCCCATTGGCTATGCCACGGACATGTGGAGCATCGGGGTCA
20110601C-002630 : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
---------+---------+---------+---------+---------+---------+ 631
SPL01_0056_H03.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
OVRM1_0004_F02.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
BKFL1_0008_E04.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
BKFL1_0008_C09.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
OVRT1_0135_G11.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
UTR01_0008_C07.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
KDN01_0098_B09.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
PST01_0055_B04.b : TCTGCTACATCCTGGTCAGTGGACTGTCCCCCTTTATGGGTGACAACGATAACGAGACCT
20110601C-002630 : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
---------+---------+---------+---------+---------+---------+ 691
SPL01_0056_H03.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
OVRM1_0004_F02.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCA
BKFL1_0008_E04.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
BKFL1_0008_C09.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
OVRT1_0135_G11.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
UTR01_0008_C07.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
KDN01_0098_B09.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
PST01_0055_B04.b : TAGCCAACGTTACCTCAGCCACCTGGGACTTCGACGATGAGGCCTTCGATGAGATCTCCG
20110601C-002630 : ACGACGCCAAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
---------+---------+---------+---------+---------+---------+ 751
SPL01_0056_H03.b : ACGACGCCAAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
OVRM1_0004_F02.b : ACGACGCCNAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
BKFL1_0008_E04.b : ACGACGCCNAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
BKFL1_0008_C09.b : ACGACGCCNAGGGATTCATCNAGCATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
OVRT1_0135_G11.b : ACGACGCCAAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
UTR01_0008_C07.b : ACGACGCCAAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
KDN01_0098_B09.b : ACGACGCCAAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
PST01_0055_B04.b : ACGACGCCAAGGATTTCATCAGCAATTTACTGAAGAAAGATATGAAAAACCGCTTGGACT
20110601C-002630 : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGA
---------+---------+---------+---------+---------+---------+ 811
SPL01_0056_H03.b : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCAAGACCATGGGAGGCCAGA
OVRM1_0004_F02.b : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGA
BKFL1_0008_E04.b : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCNAGAACATGGAGGCCNAGA
BKFL1_0008_C09.b : GCACCCAGTGCCTCCAGCACCCATGGGCTATGAAAGATACCCAGAACATGGAGGCCAAGA
OVRT1_0135_G11.b : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGA
UTR01_0008_C07.b : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGA
KDN01_0098_B09.b : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGA
PST01_0055_B04.b : GCACCCAGTGCCTCCAGCACCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGA
20110601C-002630 : AGCTCTCCAAGGACCGGATGAAAAAGTACATGGCAAGGAGGAAATGGCAGAAAACGGGCA
---------+---------+---------+---------+---------+---------+ 871
SPL01_0056_H03.b : AGCTCTCCCAGGACCGGATGAAAA*GTACATGGCAAGGGAGGAATGGCAGAAAACGGGCA
OVRM1_0004_F02.b : AGCTCTCCNAGGA
BKFL1_0008_E04.b : Aagctctcaaggaccggatgaaaagtacatggncaggagaaatggcaaaaaacgggcatg
BKFL1_0008_C09.b : AGCTCTCCCAAGACGGGATGAAAAAGTACATGGCAAGGAGGAAATGGCAAAAAACGGGC*
OVRT1_0135_G11.b : AGCTCTCCAAGGACCGGATGAAAAAGTACATGGCAAGGAGGAAATGGCAGAAAACGGGCA
UTR01_0008_C07.b : AGCTCTCCAAGGACCGGATGAAAAAGTACATGGCAAGGAGGAAATGGCAGAAAACGGGCA
KDN01_0098_B09.b : AGCTCTCCAAGGACCGGATGAAAAAGTACATGGCAAGGAGGAAATGGCAGAAAACGGGCA
PST01_0055_B04.b : AGCTCTCCAAGGACCGGATGAAAAAGTACATGGCAAGGAGGAAATGGCAGAAAACGGGCA
20110601C-002630 : ATGCTGTGAGAGCCATTGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCA
---------+---------+---------+---------+---------+---------+ 931
SPL01_0056_H03.b : ATGCTGTGgaaagcctttggaaaactgccctcttagggcattgatctccagggctcattg
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : ctgtgagagccattggagactgtcttctatggcatgatctcagggctcagtggcagaaat
BKFL1_0008_C09.b : ATGCTGTGAGAGCCA*TGGAAGACTGTCCTCTATGGCAtgatctcaggctcagggcaagg
OVRT1_0135_G11.b : ATGCTGTGAGAGCCATTGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCA
UTR01_0008_C07.b : ATGCTGTGAGAGCCATTGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCA
KDN01_0098_B09.b : ATGCTGTGAGAGCCATTGGAAGACTTTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCA
PST01_0055_B04.b : ATGCTGTGAGAGCCATTGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCA
20110601C-002630 : GGAAATCCTCAACAGGGTCACCAACCAGCCCGCTGAATGCAGAAAAATTAGAATCTGAAG
---------+---------+---------+---------+---------+---------+ 991
SPL01_0056_H03.b : gccggaaaatcctccaaaggggtccccaaccagcccgcctgaatgcccaaaaaattaaaa
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : cctcacaggntcaccaccagcccgctgatgcaaaaaaattagatcggaaaagatgtctcc
BKFL1_0008_C09.b : aatcctcaacaggttcacaacaaccgctgatgcnaaaaattaatctgagaaaagtctcaa
OVRT1_0135_G11.b : GGGAATCCTCAACAGGGTCACCAACCAGCCCGCTGAATGCAGAAAAATT*GAATCTGAAG
UTR01_0008_C07.b : GGAAATCCTCAACAGGGTCACCAACCAGCCCGCTGAATGCAGAAAAATTAGAATCTGAAG
KDN01_0098_B09.b : GGAAATCCTCAACAGGGTCACCAACCAGCCCGCTGAATGCAGAAAAATTAGAATCTGAAG
PST01_0055_B04.b : GGAAATCCTCAACAGGGTCACCAACCAGCCCGCTGAATGCAGAAAAATTAGAATCTGAAG
20110601C-002630 : AAGATGTCTCCCAAGCTTTCCTTGAGGCCGTCGCTGAGGAAAAGCCCCATGTAAAACCCT
---------+---------+---------+---------+---------+---------+ 1051
SPL01_0056_H03.b : tcctgagaaagatgtctcccaagcctttc
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : aagctttcctgaggccttcctgaagaagccccatgtaaaacccattttccaaaccatcct
BKFL1_0008_C09.b : gctttcttgagcgtcctgagaaaaccctgtaaacctatttctaaacatctgattaaattt
OVRT1_0135_G11.b : AAGATGTCTCCCA*GCTTTCCCTGAAGCCGTCGCTGAGGAAAAGCCCCATGTTAAACCCT
UTR01_0008_C07.b : AAGATGTCTCCCAAGCTTTCCTTGAGGCCGTCGCTGAGGAAAAGCCCCATGTAAAACCCT
KDN01_0098_B09.b : ***ATGTCTCCCAAGCTTTCCTTGAGGCCGTCGCTGAGGAAAAGCCCCATGTAAAACCCT
PST01_0055_B04.b : AAGATGTCTCCCAAGCTTTCCTTGAGGCCGTCGCTGAGGAAAAGCCCCATGTAAAACCCT
20110601C-002630 : ATTTTTCTAAGACCATTCGTGATTTAGAAGTTGTGGAGGGAAGCGCTGCTAGATTTGACT
---------+---------+---------+---------+---------+---------+ 1111
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : gattaaagnttgtgaggacccttctaatttgatggcaaatgaagaaacccacccgggttt
BKFL1_0008_C09.b : ggaggaaccctcatttatgcaaatgaggacccaaccgaggttttgttaaaaacactccac
OVRT1_0135_G11.b : ATTTTTCTAgacccttcctgatttaaaaattgggaagggaaaccctgctaatttgacggc
UTR01_0008_C07.b : ATTTTTCTAAGACCATTCGTGATTTAGAAGTTGTGGAGGGAAGCGCTGCTAGATTTGACT
KDN01_0098_B09.b : ATTTTTCTAAGACCATTCGTGATTTAGAAGTTGTGGAGGGAAGCGCTGCTAGATTTGACT
PST01_0055_B04.b : ATTTTTCTAAGACCATTCGTGATTTAGAAGTTGTGGAGGGAAGCGCTGCTAGATTTGACT
20110601C-002630 : GCAAGATTGAAGGATACCCAGACCCTGAGGTTGTCTGGTTCAAAGATGACCAGTCAATCA
---------+---------+---------+---------+---------+---------+ 1171
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : ccggtcaaaagacattcatccggagccccccttccaaaagacaaagaaaaggaatgcctt
BKFL1_0008_C09.b : ggagccccccttcaaaacaaagagaggaagcttttaatacagttggggaaaaagcaaacc
OVRT1_0135_G11.b : cgaattgagagaaccccaaacctgagggtgtctgggtcaaaaagaccatccatccgggag
UTR01_0008_C07.b : GCAAGATTGAAGGATACCCAGACCCTGAGGTTGTCTGGTTC
KDN01_0098_B09.b : GCAAGATTGAAGGATACCCAGACCCTGAGGTTGTCTGGTTCAAAGATGACCAGTCAATCA
PST01_0055_B04.b : GCAAGATTGAAGGATACCCAGACCCTGAGGTTGTCTGGTTCAAAGATGACCAGTCAATCA
20110601C-002630 : GGGAGTCCCGCCACTTCCAGATAGACTACGATGAGGATGGGAACTGCTCTTTAATCATTA
---------+---------+---------+---------+---------+---------+ 1231
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : tacttacgagtgcgggaaaaaccaaaaccgcgggggtcatttggaaacccctcccaacct
BKFL1_0008_C09.b : cggggtcaatttgaaaccccacaaactttgacccggggggggggggaaaaaaaagtaccc
OVRT1_0135_G11.b : tcccgccttttccgaattacaccaaaggggatggaaacgctcttttaatcttacccaatt
UTR01_0008_C07.b :
KDN01_0098_B09.b : GGGAGTCCCGCCACTTCCAGATAGACTACGATGAGGATGGGAACTGCTCTTTAATCATTA
PST01_0055_B04.b : GGGAGTCCCGCCACTTCCAGATAGACTACGATGAGGATGGGAACTGCTCTTTAATCATTA
20110601C-002630 : GCGATGTCTGCGGTGATGATGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAG
---------+---------+---------+---------+---------+---------+ 1291
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : gtgtcccgggagaagggggggaaaaaagaagataccccaaattttttttaaaattttctc
BKFL1_0008_C09.b : caaatttttttaactttttccaaaaaaaaaaaagcgcccctttttttggcgtgatttttt
OVRT1_0135_G11.b : ccgcgggaagaaaaaaaccaaatcccccgcgagggttctaaattttggggaacccccttg
UTR01_0008_C07.b :
KDN01_0098_B09.b : GCGATGTCTGCGGTGATGATGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAG
PST01_0055_B04.b : GCGATGTCTGCGGTGATGATGATGCCAAGTACACCTGGCAGGCTNGTCACAGTCTTGGAG
20110601C-002630 : *AAGCACCTGCACAGCAGAGCTCATTGTGGAAA**CATGGAGAAAG*AGAAGGGGAAGGG
---------+---------+---------+---------+---------+---------+ 1347
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : taaaaaaaaaaaaccgcccattttttggccggaggtttngnggnnnnnnnnngaggnnnn
BKFL1_0008_C09.b : tttgttaannnnnngtgttgggcacccttttttttttgatatttt
OVRT1_0135_G11.b : cccaacaacctctttgggaaccccgggaaaagaaaagggggggggaaaaaaaagaggaaa
UTR01_0008_C07.b :
KDN01_0098_B09.b : AAAGCACCTGCACAGCAGAGCTCATTGTGGAAACCCATGGagaaag*agaaggggaaggg
PST01_0055_B04.b : *AAGCACCTGCACAGCAGAGCTCATTGTGGAAA**CATGGAGGAGGGAGAAGGGGAAGGG
20110601C-002630 : GAAGAAGAAGAGAGAGAAGAAGTGACCAAAGCCAAGGAGAGCAGTTTCTAAGTCAGATTA
---------+---------+---------+---------+---------+---------+ 1407
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : nnccccccttccactttgatgacaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
BKFL1_0008_C09.b :
OVRT1_0135_G11.b : gtgcccccccccaaagacttttttctgaaataaaaaaaatttctctccgccaaaaaaaaa
UTR01_0008_C07.b :
KDN01_0098_B09.b : gaagaagaagnnagagaagaagTGACCAAAGCCAAGGAGAGCAGTTTCTAAGTCAGATTA
PST01_0055_B04.b : GAAGAGAAAGAGaggaagagtgaccaagccaagaggagcagtttctagtcagatacaaga
20110601C-002630 : CAAGACTATTTCTCTAA...........................................
---------+---------+---------+---------+---------+---------+ 1424
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b : nnnn
BKFL1_0008_C09.b :
OVRT1_0135_G11.b : aaaaaaaaagcgtgtgcttccctggggggccctccaatatattaaaaa
UTR01_0008_C07.b :
KDN01_0098_B09.b : CAAGACTATTTCTCTAAgctcaaangaaaaagaaaaaatccaggtagtaaaaccctagtg
PST01_0055_B04.b : ctattctctaaagctcaaagaaaaaaaaaaaaaaggcactgtgctcaactgcagtccggc
20110601C-002630 : ............................................................
---------+---------+---------+---------+---------+---------+ 1424
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b :
BKFL1_0008_C09.b :
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b : tgaagattataattagtcatggggggtgactctcacacattgttgataccacacgtacga
PST01_0055_B04.b : cctaaactatctaagaaaacttccaacctccctgactgaactaaagaagcatgttgtgta
20110601C-002630 : ............................................................
---------+---------+---------+---------+---------+---------+ 1424
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b :
BKFL1_0008_C09.b :
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b : tggcattattgaatactggccctaaaacaaccactaaattcttgggaatcccgtactgct
PST01_0055_B04.b : cttgtatgcacttaagggtccaataacatcctccaatccaaaaagctttttccgactcaa
20110601C-002630 : ............................................................
---------+---------+---------+---------+---------+---------+ 1424
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b :
BKFL1_0008_C09.b :
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b : gaccttgactgggaagttcccaggaattttgggagtcattccaataggcccgaaaaaggc
PST01_0055_B04.b : tgggtgccaaccccaggattatggttgacccggacagcaaatttcttcctccccacaacg
20110601C-002630 : ............................................................
---------+---------+---------+---------+---------+---------+ 1424
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b :
BKFL1_0008_C09.b :
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b : tggtcatccccaaacccaaggggttccatccccaaaaggttccccccccttcgggggatt
PST01_0055_B04.b : ggcgggtgggggggggttctcctaggtaggtccaccggaacgaaatttgagagggacaaa
20110601C-002630 : ............................................................
---------+---------+---------+---------+---------+---------+ 1424
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b :
BKFL1_0008_C09.b :
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b : tctaggtttaaaagaaaattccgcgctatttgggcggagagaattcaaaacccgtggtta
PST01_0055_B04.b : gggggtttttcccccaaaaacaaaagaaaaaaaacttcctcctct
20110601C-002630 : ............................................................
---------+---------+---------+---------+---------+---------+ 1424
SPL01_0056_H03.b :
OVRM1_0004_F02.b :
BKFL1_0008_E04.b :
BKFL1_0008_C09.b :
OVRT1_0135_G11.b :
UTR01_0008_C07.b :
KDN01_0098_B09.b : cacattaa
PST01_0055_B04.b :