Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-002721

Sequence: [FASTA format sequence] GCGCACGGCT GGGCTTTCAA CGGCAGTTCT TGAGCTGAGC TTTGGGATCA CATTTTGCTA AAAAAAATAT AAACGATGTC CTATATCTAT TCAAACTTCT GGGACATTTT ATTCTACCCT TTCCACTCAA GGCCCCCCCA GGCCTGCAAG GTGTCCGCTC TGAAAGGAGA AACAAAGAAT TCACGAGACG ACCTGGCCCC AGGAGACACA AAACGCAGCC TTTTCTTCTG CCCAACAGGA GGGACAGAGG AAGAAGAATG CGAACTGATT GTCCAGGAGA ATTTCAAAGA AGGGCTGTCT CAGGAGCCCA CCCAAGACAG ATCAGGAGGT CTGAGGGCGG ATGAACGGAC CCCGCGGAAG CTGAGGCTCC TGCTGGTGGG AAAACCCGGA AGTGGGAAAA GCGCAACAGG AAACAGCATC CTCGGCCGGA AGCTGTTCAA GTGCAAGCTC AGTTCCAGAC CGGTGACCCA GGACTTCCAG CGGGGGTGTC GGGTGTGGGC TGGGAGGGAG CTCGAGGTCA TAGACACCCC TGACATCCTG TCCCCTCGGG TGGCGCCGGG CGTGGCCGCC CAGGGCTTCA GCCGAGCCAT TGCCTTCTCC TTCCCCGGGC CCCACGCCGT CCTCCTGGTG ACACAGCTGG GCCGCTTCAC GCAGGAGGAT CAAGAGGTGG TCAGGCGCCT CCAGGAAGTG TTTGGGGTGG GCGTCCTGGC CCACACCATC CTGGTGTTCA CACGGAAGGA AGACCTGGGG GGCGGCTCCC TGGAAGAGTA CCTGCGAGAG ACGGACAACC GGGAGCTGGC CCAGCTGGAC GTGATCTGCG AGCGGCGCCA CTGCGGCTTC AACAACAAGG TGGAGGGGGC GGAGCAGGAA GCCCAGCTGG AGGAGCTCAT GCAGCAAATC GAAAGCATCC TGTGGGAAAA CGAGGGCCAT TATTACAGCA ACCAGGCTTG CCATTACTCC CCGTGGAACG TGCTGCTCCA GCAAGCGGGC GAGGGGCAGC TCCACCAGGG GTGGGGTTGC GAGGCAGGGC TCAGCCAGGA GTCCTGGCTG TAGACACTCT GCAGATCCAG GAGACTTGAG GGAGCTCACA CACAGCTCCT AAGAGGCACC CATTTGAGAT GCGCTGGCTT TCAGTGCTTC CCACCAGCCT CCCTCCAACT GAGTCCCACT TCCAAGCCCT CACCTGCTCT CGCCAGCTCA CGGGCCACTG CCCATGCCAG GCTCCGGAGT TCCCAGGCCC ATCATCCCCT CTTCCAGAAC ACCCTCCCTC CTCTGTGCCT CGCCATCCTC AGGCTTTCCA GGCCTCTAGT AGAACACACG TAGAGCAAAA GCTTCCTGAG GGCAGGCCTG TGCCTCATTC T

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
GIMAP6 GTPase IMAP family member 6 [Homo sapiens]. 308 1e-83 O

GIMAP1 GTPase IMAP family member 1 [Homo sapiens]. 165 1e-40 O

GIMAP1-GIMAP5 GIMAP1-GIMAP5 protein [Homo sapiens]. 164 1e-40

GIMAP2 GTPase IMAP family member 2 [Homo sapiens]. 163 4e-40 O

GIMAP5 GTPase IMAP family member 5 [Homo sapiens]. 162 5e-40 O

GIMAP8 GTPase IMAP family member 8 [Homo sapiens]. 142 7e-34

GIMAP7 GTPase IMAP family member 7 [Homo sapiens]. 140 2e-33 O

GIMAP4 GTPase IMAP family member 4 [Homo sapiens]. 138 1e-32 O

Locus	Definition	Score	E value	FL
GIMAP6	GTPase IMAP family member 6 [Homo sapiens].	308	1e-83	O
GIMAP1	GTPase IMAP family member 1 [Homo sapiens].	165	1e-40	O
GIMAP1-GIMAP5	GIMAP1-GIMAP5 protein [Homo sapiens].	164	1e-40
GIMAP2	GTPase IMAP family member 2 [Homo sapiens].	163	4e-40	O
GIMAP5	GTPase IMAP family member 5 [Homo sapiens].	162	5e-40	O
GIMAP8	GTPase IMAP family member 8 [Homo sapiens].	142	7e-34
GIMAP7	GTPase IMAP family member 7 [Homo sapiens].	140	2e-33	O
GIMAP4	GTPase IMAP family member 4 [Homo sapiens].	138	1e-32	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Gimap6 GTPase IMAP family member 6 [Mus musculus]. 232 4e-61 O

Gimap1 GTPase IMAP family member 1 [Mus musculus]. 171 1e-42 O

Gimap1 GTPase IMAP family member 1 [Mus musculus]. 171 1e-42 O

Gimap3 GTPase IMAP family member 3 [Mus musculus]. 162 6e-40 O

Gimap5 GTPase IMAP family member 5 [Mus musculus]. 160 2e-39 O

Gimap7 GTPase, IMAP family member 7 [Mus musculus]. 137 2e-32 O

Gimap9 GTPase, IMAP family member 9 [Mus musculus]. 135 1e-31 O

Gimap4 GTPase IMAP family member 4 isoform a [Mus musculus]. 125 1e-28 O

Gimap8 GTPase IMAP family member 8 [Mus musculus]. 123 3e-28

Gimap8 GTPase IMAP family member 8 [Mus musculus]. 123 3e-28

Locus	Definition	Score	E value	FL
Gimap6	GTPase IMAP family member 6 [Mus musculus].	232	4e-61	O
Gimap1	GTPase IMAP family member 1 [Mus musculus].	171	1e-42	O
Gimap1	GTPase IMAP family member 1 [Mus musculus].	171	1e-42	O
Gimap3	GTPase IMAP family member 3 [Mus musculus].	162	6e-40	O
Gimap5	GTPase IMAP family member 5 [Mus musculus].	160	2e-39	O
Gimap7	GTPase, IMAP family member 7 [Mus musculus].	137	2e-32	O
Gimap9	GTPase, IMAP family member 9 [Mus musculus].	135	1e-31	O
Gimap4	GTPase IMAP family member 4 isoform a [Mus musculus].	125	1e-28	O
Gimap8	GTPase IMAP family member 8 [Mus musculus].	123	3e-28
Gimap8	GTPase IMAP family member 8 [Mus musculus].	123	3e-28

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC482796 PREDICTED: similar to GTPase, IMAP family member 6 isoform 1 [Canis familiaris]. 279 5e-75 O

LOC482795 PREDICTED: similar to GTPase, IMAP family member 1 [Canis familiaris]. 167 3e-41 O

LOC482797 PREDICTED: similar to GTPase, IMAP family member 5 [Canis familiaris]. 166 5e-41

LOC475533 PREDICTED: similar to GTPase, IMAP family member 4 (Immunity-associated protein 4) (Immunity-associated nucleotide 1 protein) (hIAN1) [Canis familiaris]. 147 2e-35 O

LOC610898 PREDICTED: similar to GTPase, IMAP family member 7 [Canis familiaris]. 147 2e-35 O

LOC482794 PREDICTED: similar to GTPase, IMAP family member 8 [Canis familiaris]. 122 1e-27

LOC482798 PREDICTED: similar to GTPase, IMAP family member 5 [Canis familiaris]. 107 1e-24 O

Locus	Definition	Score	E value	FL
LOC482796	PREDICTED: similar to GTPase, IMAP family member 6 isoform 1 [Canis familiaris].	279	5e-75	O
LOC482795	PREDICTED: similar to GTPase, IMAP family member 1 [Canis familiaris].	167	3e-41	O
LOC482797	PREDICTED: similar to GTPase, IMAP family member 5 [Canis familiaris].	166	5e-41
LOC475533	PREDICTED: similar to GTPase, IMAP family member 4 (Immunity-associated protein 4) (Immunity-associated nucleotide 1 protein) (hIAN1) [Canis familiaris].	147	2e-35	O
LOC610898	PREDICTED: similar to GTPase, IMAP family member 7 [Canis familiaris].	147	2e-35	O
LOC482794	PREDICTED: similar to GTPase, IMAP family member 8 [Canis familiaris].	122	1e-27
LOC482798	PREDICTED: similar to GTPase, IMAP family member 5 [Canis familiaris].	107	1e-24	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
GIMAP6 GTPase IMAP family member 6 [Bos taurus]. 286 3e-77 O

LOC530077 PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus]. 171 1e-42 O

GIMAP1 PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus]. 171 1e-42 O

GIMAP1 PREDICTED: GTPase, IMAP family member 1-like isoform 1 [Bos taurus]. 171 1e-42 O

GIMAP1 PREDICTED: GTPase, IMAP family member 1-like isoform 1 [Bos taurus]. 171 1e-42 O

GIMAP1 PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus]. 171 1e-42 O

LOC530077 PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus]. 171 1e-42 O

LOC530077 PREDICTED: GTPase, IMAP family member 1-like isoform 1 [Bos taurus]. 170 3e-42 O

LOC530077 PREDICTED: GTPase, IMAP family member 1-like [Bos taurus]. 169 4e-42 O

GIMAP1 GTPase, IMAP family member 1 [Bos taurus]. 168 9e-42 O

Locus	Definition	Score	E value	FL
GIMAP6	GTPase IMAP family member 6 [Bos taurus].	286	3e-77	O
LOC530077	PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus].	171	1e-42	O
GIMAP1	PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus].	171	1e-42	O
GIMAP1	PREDICTED: GTPase, IMAP family member 1-like isoform 1 [Bos taurus].	171	1e-42	O
GIMAP1	PREDICTED: GTPase, IMAP family member 1-like isoform 1 [Bos taurus].	171	1e-42	O
GIMAP1	PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus].	171	1e-42	O
LOC530077	PREDICTED: GTPase, IMAP family member 1-like isoform 2 [Bos taurus].	171	1e-42	O
LOC530077	PREDICTED: GTPase, IMAP family member 1-like isoform 1 [Bos taurus].	170	3e-42	O
LOC530077	PREDICTED: GTPase, IMAP family member 1-like [Bos taurus].	169	4e-42	O
GIMAP1	GTPase, IMAP family member 1 [Bos taurus].	168	9e-42	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100627300 PREDICTED: GTPase IMAP family member 6-like [Sus scrofa]. 372 e-103 O

LOC100523477 PREDICTED: GTPase IMAP family member 2-like [Sus scrofa]. 174 1e-43 O

LOC100519177 PREDICTED: GTPase IMAP family member 1-like isoform 2 [Sus scrofa]. 164 1e-40 O

LOC100518703 PREDICTED: GTPase IMAP family member 1-like [Sus scrofa]. 163 2e-40 O

LOC100518524 PREDICTED: GTPase IMAP family member 6-like [Sus scrofa]. 142 4e-34 O

LOC100518347 PREDICTED: LOW QUALITY PROTEIN: GTPase IMAP family member 4-like [Sus scrofa]. 118 9e-27 O

LOC100624542 PREDICTED: putative protein PHLOEM PROTEIN 2-LIKE A3-like [Sus scrofa]. 58.5 8e-09 O

Locus	Definition	Score	E value	FL
LOC100627300	PREDICTED: GTPase IMAP family member 6-like [Sus scrofa].	372	e-103	O
LOC100523477	PREDICTED: GTPase IMAP family member 2-like [Sus scrofa].	174	1e-43	O
LOC100519177	PREDICTED: GTPase IMAP family member 1-like isoform 2 [Sus scrofa].	164	1e-40	O
LOC100518703	PREDICTED: GTPase IMAP family member 1-like [Sus scrofa].	163	2e-40	O
LOC100518524	PREDICTED: GTPase IMAP family member 6-like [Sus scrofa].	142	4e-34	O
LOC100518347	PREDICTED: LOW QUALITY PROTEIN: GTPase IMAP family member 4-like [Sus scrofa].	118	9e-27	O
LOC100624542	PREDICTED: putative protein PHLOEM PROTEIN 2-LIKE A3-like [Sus scrofa].	58.5	8e-09	O

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

PST01 0064 G11 PST01_0064_G11.b FS701930
SPL01 0023 C10 SPL01_0023_C10.b BP157599
SPLT1 0094 G10 SPLT1_0094_G10.b HX246562
THY01 0031 F09 THY01_0031_F09.b BP166435 AK238799
THY01 0032 B07 THY01_0032_B07.b BP161225
THY01 0098 G02 THY01_0098_G02.b BP167006
UTR01 0032 H05 UTR01_0032_H05.b BP173304 AK352239

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
208 A 4 0 0.667 W N ACA/T
G 2 0 0.333 GCA/A

Alignment: TOP

20110601C-002721 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
THY01_0031_F09.b : tggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0094_G10.b :                                             nnnnggcgagtagaxx
THY01_0032_B07.b :                                                   gggggaaact
PST01_0064_G11.b :                                                             
UTR01_0032_H05.b :                                                     cxxxxxxx
THY01_0098_G02.b :                                                             
SPL01_0023_C10.b :                                                             


20110601C-002721 : .....................GCGCACGGCTGGGCTTTCAACGGCAGTTCTTGAGCTGAG
                   ---------+---------+---------+---------+---------+---------+ 39
THY01_0031_F09.b : xxxxxxxxxxxxxxxxxxxxxGCGCACGGCTGGGCTTTCAACGGCAGTTCTTGAGCTGAG
SPLT1_0094_G10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgAGTTCTTGAGCTGAG
THY01_0032_B07.b : axxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PST01_0064_G11.b :                                                       nnccct
UTR01_0032_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0098_G02.b :                             gagcxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0023_C10.b :                                                             


20110601C-002721 : CTTTGGGATCACATTTTGCTAAAAAAAATATAAACGATGTCCTATATCTATTCAAACTTC
                   ---------+---------+---------+---------+---------+---------+ 99
THY01_0031_F09.b : CTTTGGGATCACATTTTGCTAAAAAAAATATAAACGATGTCCTATATCTATTCAAACTTC
SPLT1_0094_G10.b : CTTTGGGATCACATTTTGCTAAAAAAAATATAAACGATGTCCTATATCTATTCAAACTTC
THY01_0032_B07.b : xxxxxxxxxxxxxTTTTGCTAAAAAAAATATAAACGATGTCCTATATCTATTCAAACTTC
PST01_0064_G11.b : gctgtggctctggacttttgctAAAAAATATAAACAATGTCCTATATCTATTCAAACTTC
UTR01_0032_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxTATAAACGATGTCCTATATCTATTCAAACTTC
THY01_0098_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTC
SPL01_0023_C10.b :                                                             


20110601C-002721 : TGGGACATTTTATTCTACCCTTTCCACTCAAGGCCCCCCCAGGCCTGCAAGGTGTCCGCT
                   ---------+---------+---------+---------+---------+---------+ 159
THY01_0031_F09.b : TGGGACATTTTATTCTACCCTTTCCACTCAAGGCCCCCCCAGGCCTGCAAGGTGTCCGCT
SPLT1_0094_G10.b : TGGGACATTTTATTCTACCCTTTCCACTCAAGGCCCCCCCAGGCCTGCAAGGTGTCCGCT
THY01_0032_B07.b : TGGGACATTTTATTCTACCCTTTCCACTCAAGGCCCCCCCAGGCCTGCAAGGTGTCCGCT
PST01_0064_G11.b : TGGGACATTTTATTCTACCCTTTCCACTCAAGGCCCCCCCAGGCCTGCAAGGTGTCCGCT
UTR01_0032_H05.b : TGGGACATTTTATTCTACCCTTTCCACTCAAGGCCCCCCCAGGCCTGCAAGGTGTCCGCT
THY01_0098_G02.b : TGGGACATTTTATTCTACCCTTTCCACTCAAGGCCCCCCCAGGCCTGCAAGGTGTCCGCT
SPL01_0023_C10.b :                                                             


20110601C-002721 : CTGAAAGGAGAAACAAAGAATTCACGAGACGACCTGGCCCCAGGAGACACAAAACGCAGC
                   ---------+---------+---------+---------+---------+---------+ 219
THY01_0031_F09.b : CTGAAAGGAGAAACAAAGAATTCACGAGACGACCTGGCCCCAGGAGACACAAAACGCAGC
SPLT1_0094_G10.b : CTGAAAGGAGAAACAAAGAATTCACGAGACAACCTGGCCCCAGGAGACGCAAAACGCAGC
THY01_0032_B07.b : CTGAAAGGAGAAACAAAGAATTCACGAGACGACCTGGCCCCAGGAGACACAAAACGCAGC
PST01_0064_G11.b : CTGAAAGGAGAAACAAAGAATTCACGAGACCACCTGGCCCCAGGAGACGCAAAACGCAGC
UTR01_0032_H05.b : CTGAAAGGAGAAACAAAGAATTCACGAGACGACCTGGCCCCAGGAGACACAAAACGCAGC
THY01_0098_G02.b : CTGAAAGGAGAAACAAAGAATTCACGAGACGACCTGGCCCCAGGAGACACAAAACGCAGC
SPL01_0023_C10.b :                                                             


20110601C-002721 : CTTTTCTTCTGCCCAACAGGAGGGACAGAGGAAGAAGAATGCGAACTGATTGTCCAGGAG
                   ---------+---------+---------+---------+---------+---------+ 279
THY01_0031_F09.b : CTTTTCTTCTGCCCAACAGGAGGGACAGAGGAAGAAGAATGCGAGCTGATTGTCCAGGAG
SPLT1_0094_G10.b : CTTTTCTTCTGCCCAACAGGAGGGACAGAGGAAGAAGAATGCGAACTGATTGTCCAGGAG
THY01_0032_B07.b : CTTTTCTTCTGCCCAACAGGAGGGACAGAGGAAGAAGAATGCGAACTGATTGTCCAGGAG
PST01_0064_G11.b : CTTTTCTTCTGCCCAACAGGAGGGACAGAGGAAGAAGAATGCGAACTGATTGTCCAGGAG
UTR01_0032_H05.b : CTTTTCTTCTGCCCAACAGGAGGGACAGAGGAAGAAGAATGCGAACTGATTGTCCAGGAG
THY01_0098_G02.b : CTTTTCTTCTGCCCAACAGGAGGGACAGAGGAAGAAGAATGCGAACTGATTGTCCAGGAG
SPL01_0023_C10.b :                                                             


20110601C-002721 : AATTTCAAAGAAGGGCTGTCTCAGGAGCCCACCCAAGACAGATCAGGAGGTCTGAGGGCG
                   ---------+---------+---------+---------+---------+---------+ 339
THY01_0031_F09.b : AATTTCAAAGAAGGGCTGTCTCAGGAGCCCACCCAAGACAGATCAGGAGGTCTGAGGGCG
SPLT1_0094_G10.b : AATTTCAAAGAAGGGCTGTCTCAGGAGCCCACCCAAGACAGATCAGGAGGTCTGAGGGCG
THY01_0032_B07.b : AATTTCAAAGAAGGGCTGTCTCAGGAGCCCACCCAAGACAGATCAGGAGGTCTGAGGGCG
PST01_0064_G11.b : AATTTCAAAGAAGGGCTGTCTCAGGAGCCCACCCAAGACAGATCAGGAGGTCTGAGGGCG
UTR01_0032_H05.b : AATTTCAAAGAAGGGCTGTCTCAGGAGCCCACCCAAGACAGATCAGGAGGTCTGAGGGCG
THY01_0098_G02.b : AATTTCAAAGAAGGGCTGTCTCAGGAGCCCACCCAAGACAGATCAGGAGGTCTGAGGGCG
SPL01_0023_C10.b :                                                             


20110601C-002721 : GATGAACGGACCCCGCGGAAGCTGAGGCTCCTGCTGGTGGGAAAACCCGGAAGTGGGAAA
                   ---------+---------+---------+---------+---------+---------+ 399
THY01_0031_F09.b : GATGAACGGACCCCGCGGAAGCTGAGGCTCCTGCTGGTGGGAAAACCCGGAAGTGGGAAA
SPLT1_0094_G10.b : GATGAACGGACCCCGCGGAAGCTGAGGCTCCTGCTGGTGGGAAAACCCGGAAGTGGGAAA
THY01_0032_B07.b : GATGAACGGACCCCGCGGAAGCTGAGGCTCCTGCTGGTGGGAAAACCCGGAAGTGGGAAA
PST01_0064_G11.b : GATGAACGGACCCCGCGGAAGCTGAGGCTCCTGCTGGTGGGAAAACCCGGAAGTGGGAAA
UTR01_0032_H05.b : GATGAACGGACCCCGCGGAAGCTGAGGCTCCTGCTGGTGGGAAAACCCGGAAGTGGGAAA
THY01_0098_G02.b : GATGAACGGACCCCGCGGAAGCTGAGGCTCCTGCTGGTGGGAAAACCCGGAAGTGGGAAA
SPL01_0023_C10.b :                                                             


20110601C-002721 : AGCGCAACAGGAAACAGCATCCTCGGCCGGAAGCTGTTCAAGTGCAAGCTCAGTTCCAGA
                   ---------+---------+---------+---------+---------+---------+ 459
THY01_0031_F09.b : AGCGCAACAGGAAACAGCATCCTCGGCCGGAAGCTGTTCAAGTGCAAGCTCAGTTCCAGA
SPLT1_0094_G10.b : AGCGCAACAGGAAACAGCATCCTCGGCCGGAAGCTGTTCAAGTGCAAGCTCAGTTCCAGA
THY01_0032_B07.b : AGCGCAACAGGAAACAGCATCCTCGGCCGGAAGCTGTTCAAGTGCAAGCTCAGTTCCAGA
PST01_0064_G11.b : AGCGCAACAGGAAACAGCATCCTCGGCCGGAAGCTGTTCAAGTGCAAGCTCAGTTCCAGG
UTR01_0032_H05.b : AGCGCAACAGGAAACAGCATCCTCGGCCGGAAGCTGTTCAAGTGCAAGCTCAGTTCCAGA
THY01_0098_G02.b : AGCGCAACAGGAAACAGCATCCTCGGCCGGAAGCTGTTCAAGTGCAAGCTCAGTTCCAGA
SPL01_0023_C10.b :                                                             


20110601C-002721 : CCGGTGACCCAGGACTTCCAGCGGGGGTGTCGGGTGTGGGCTGGGAGGGAGCTCGAGGTC
                   ---------+---------+---------+---------+---------+---------+ 519
THY01_0031_F09.b : CCGGTGACCCAGGACTTCCAGCGGGGGTGTCGGGTGTGGGCTGGGAGGGAGCTCGAGGTC
SPLT1_0094_G10.b : CCGGTGACCCAGGACTTCCAGCGGGGGTGTCGGGTGTGGGCTGGGAGGGAGCTCGAGGTC
THY01_0032_B07.b : CCGGTGACCCAGGACTTCCAGCGGGGGTGTCGGGTGGGGGCTGGGAGGGAGCTCGAGGTC
PST01_0064_G11.b : CCGGTGACCCAGGACTTCCAGCGGGGGTGTCGGGTGTGGGCTGGGAGGGAGCTCGAGGTC
UTR01_0032_H05.b : CCGGTGACCCAGGACTTCCAGCGGGGGTGTCGGGTGTGGGCTGGGAGGGAGCTCGAGGTC
THY01_0098_G02.b : CCGGTGACCCAGGACTTCCAGCGGGGGTGTCGGGTGTGGGCTGGGAGGGAGCTCGAGGTC
SPL01_0023_C10.b :                                               ttgggttgxxxxxx


20110601C-002721 : ATAGACACCCCTGACATCCTGTCCCCTCGGGTGGCGCCGGGCGTGGCCGCCCAGGGCTTC
                   ---------+---------+---------+---------+---------+---------+ 579
THY01_0031_F09.b : ATAGACACCCCTGACATCCTGTCCCCTCGGGTGGCGCCGGGCGTGGCCGCCCAGGGCTTC
SPLT1_0094_G10.b : ATAGACACCCCCGACATCCTGTCCCCTCGGGCGGCGCCGGGCGTGGCCGCCCAGGGCTTC
THY01_0032_B07.b : ATAGACACCCCTGACATCCTGTCCCCTCGGGTGGCGCCGGGCGTGGCCGCCCAGGGCTTC
PST01_0064_G11.b : ATAGACACCCCTGACATCCTGTCCCCTCGGGTGGCGCCGGGCGTGGCCGCCCAGGGCTTC
UTR01_0032_H05.b : ATAGACACCCCTGACATCCTGTCCCCTCGGGTGGCGCCGGGCGTGGCCGCCCAGGGCTTC
THY01_0098_G02.b : ATAGACACCCCTGACATCCTGTCCCCTCGGGTGGCGCCGGGCGTGGCCGCCCAGGGCTTC
SPL01_0023_C10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-002721 : AGCCGAGCCATTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG
                   ---------+---------+---------+---------+---------+---------+ 639
THY01_0031_F09.b : AGCCGAGCCATTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG
SPLT1_0094_G10.b : AGCCGAGCCATTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG
THY01_0032_B07.b : AGCCGAGCCATTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG
PST01_0064_G11.b : AGCCGAGCCATTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG
UTR01_0032_H05.b : AGCCGAGCCGTTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG
THY01_0098_G02.b : AGCCGAGCCATTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG
SPL01_0023_C10.b : xxxxxxxxxxTTGCCTTCTCCTTCCCCGGGCCCCACGCCGTCCTCCTGGTGACACAGCTG


20110601C-002721 : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAAGTGTTTGGGGTG
                   ---------+---------+---------+---------+---------+---------+ 699
THY01_0031_F09.b : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAAGTGTTTGGGGTG
SPLT1_0094_G10.b : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAGGTGTTTGGGGTG
THY01_0032_B07.b : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAAGTGTTTGGGGTG
PST01_0064_G11.b : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAAGTGTTTGGGGTG
UTR01_0032_H05.b : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAAGTGTTTGGGGTG
THY01_0098_G02.b : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAAGTGTTTGGGGTG
SPL01_0023_C10.b : GGCCGCTTCACGCAGGAGGATCAAGAGGTGGTCAGGCGCCTCCAGGAGGTGTTTGGGGTG


20110601C-002721 : GGCGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAGGAAGACCTGGGGGGCGGCTCC
                   ---------+---------+---------+---------+---------+---------+ 759
THY01_0031_F09.b : GGCGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAGGAAGACCTGGGGGGCGGCTCC
SPLT1_0094_G10.b : GGCGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAAGAAGACCTGGGGGGCGGCTCC
THY01_0032_B07.b : GGCGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAGGAAGACCTGGGGGGCGGCTCC
PST01_0064_G11.b : GGCGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAGGAAGACCTGGG*GGCGGCTCC
UTR01_0032_H05.b : G*CGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAGGAAGACCTGGGGGGCGGCTCC
THY01_0098_G02.b : GGCGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAGGAAGACCTGGGGGGCGGCTCC
SPL01_0023_C10.b : GGCGTCCTGGCCCACACCATCCTGGTGTTCACACGGAAGGAAGACCTGGGGGGCGGCTCC


20110601C-002721 : CTGGAAGAGTA*CCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCTG
                   ---------+---------+---------+---------+---------+---------+ 818
THY01_0031_F09.b : CTGGAAGAGTA*CCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCTG
SPLT1_0094_G10.b : CTGGAAGAGTA*CCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCTG
THY01_0032_B07.b : CTGGAAGAGTAACCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCTG
PST01_0064_G11.b : CTGGAAGAGTA*CCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCTG
UTR01_0032_H05.b : CTGGAAGAGTA*CCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCCG
THY01_0098_G02.b : CTGGAAGAGTA*CCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCTG
SPL01_0023_C10.b : CTGGAAGAGTA*CCTGCGAGAGACGGACAACCGGGAGCTGGCCCAGCTGGACGTGATCTG


20110601C-002721 : CGAGCGG*CGCCACTGCGGCTTCAACAACAAGGTGGAGGGGGCGGAGCAGGAAGCCCAGC
                   ---------+---------+---------+---------+---------+---------+ 877
THY01_0031_F09.b : CGAGCGG*CGCCACTGCGGCTTCAACAACAAAGTGGAGGGGGCGGAGCAGGAAACCCAGC
SPLT1_0094_G10.b : TGAGCGG*CGCCACTGCGGCTTCAACAACAAGGTGGAGGGGGCGGAACAGGAAACCCACC
THY01_0032_B07.b : CGAGCGGGCGCCACTGCGGCTTCAACAACAAGGTGGAGGGGGCGGAGCAGGAAACCCACT
PST01_0064_G11.b : CGAGCGG*CGCCACTGCGGCTTCAACAACAAGGTGGAGGGGGCGGAGCANGAAGCCCAGC
UTR01_0032_H05.b : CGAGCGG*CGCCACTGCGGCTTCAACAACAAGGTGGAGGGGGCGGAGCAGGAAGCCCAGC
THY01_0098_G02.b : CGAGCGG*CGCCACTGCGGCTTCAACAACAAGGTGGAGGGGGCGGAGCAAGAAGCCCAGC
SPL01_0023_C10.b : TGAGCGG*CGCCACTGCGGCTTCAACAACAAGGTGGAGGGGGCGGAGCAGGAAGCCCAGC


20110601C-002721 : TGGAGGAGCTCATGCAGCAAATCGAAAGCATCCTGTGGGAAAACGAGGGCCATTATTACA
                   ---------+---------+---------+---------+---------+---------+ 937
THY01_0031_F09.b : TGGAGGAGCTCATGCAGCAAATCGAAAGCATCCTGTGGGAAAACAAGGGACATAATAACA
SPLT1_0094_G10.b : TGGAAGAGCTCATGCAGCAAATCGAAAGCATCCTGTGGGGAAAAAAGGGCCATTATTACA
THY01_0032_B07.b : TGGAGGAACTCATGCAGCAAATCGAAAGCATCCTGTGGGAAAACGAGGGAAATTATTACA
PST01_0064_G11.b : TGGAGGAGCTCATGCAGCAAATCGAAAGCATCCTGTGGGGAAACGAGGGACATTATTACA
UTR01_0032_H05.b : TGGAGGAGCTCATGCAGCAAATCGAAAGCATCCTGTGGGAAAACGAGGGACATTATTACA
THY01_0098_G02.b : TGGAGGAGCTCATGCAGCAAATCGAAAGCATCCTGTGGGAAAACGAGGGACATTATTACA
SPL01_0023_C10.b : TGGAGGAGCTCATGCAGCAAATCGAAAGCATCCTGTGGGAAAACGAGGGCCATTATTACA


20110601C-002721 : GCAACCAGGCTTGCCATTACTCCCCGTGGAACGTGCTGCTCCAGCAAGCGGGCGAGGGG*
                   ---------+---------+---------+---------+---------+---------+ 996
THY01_0031_F09.b : GCAACCAngccttgccattactcccccgggaaatgtgcttgctccaccaaacggggcgaa
SPLT1_0094_G10.b : GCAACTAGGCTTTGCAATACTCCCCcngggaacgtgctgctccacaaacgggcgaggggc
THY01_0032_B07.b : GCAACCcaggtttgccattactcccccgtgaaatgtggtgcttccacaagcggggcgagg
PST01_0064_G11.b : GNCACCAGGCTTGGCCNATACTCCCGTGGAATGTGCTGCTCCAGCAAGCGGGCGAAGGG*
UTR01_0032_H05.b : Gncacca                                                    
THY01_0098_G02.b : GCAACCAGGCTT*GCCATTACTCCCGTGGAATGTGCTGCTCCAACAAGCGGGCGAGGGGG
SPL01_0023_C10.b : GCAACCAGGCTTGCCATTACTCCCCGTGGAACGTGCTGCTCCAGCAAGCGGGCGAGGGG*


20110601C-002721 : CAGCTCCACCAGGGGTGGGGTTGCGAGGCAGGGCTCAGCCAGGAGTCCTGGCTGTAGACA
                   ---------+---------+---------+---------+---------+---------+ 1056
THY01_0031_F09.b : ggggcagctccccccagggggtgggggctgccaaggcaggaactccaccccagaaatccc
SPLT1_0094_G10.b : aacttcaccagggtggggcttccaggcagggctcaccaggatatctggctttaaaactct
THY01_0032_B07.b : gggagcttccaccaggggtgggggctggcaagggcaggattcaccccggaagtccctggc
PST01_0064_G11.b : CAGCTCCACCAGGGGTGGGGCTGCGAGGCAGGACTCAGCCAGGAGTCCTGGCTGTAGACA
UTR01_0032_H05.b :                                                             
THY01_0098_G02.b : CAGCTCCACCAGGGGTGGGGCTGCGAAGCAGGAatcacccagaattcctggctgtaaaca
SPL01_0023_C10.b : CAGCTCCACCAGGGGTGGGGTTGCGAGGCAGGGCTCAGCCAGGAGTCCTGGCTGTAGACA


20110601C-002721 : CTCTGCAGATCCAGGAGACTTGAGGGAGCTCACACACAGCTCCTAAGAGGCACCCATTTG
                   ---------+---------+---------+---------+---------+---------+ 1116
THY01_0031_F09.b : tggccttgaaaaacccttctgccaaattccaggaaaaacttttaggggaaaccttcccaa
SPLT1_0094_G10.b : gcaaatccggaaaattgaggaactacccccactccaaaaagcacccatttaaagcgctgg
THY01_0032_B07.b : tgttaaacccttctggcaaaacccaggaaaattttgaggggagtccccaccaccccccct
PST01_0064_G11.b : CTCTGCAGATCCCAGAGACTTGAGGGAGCTCA*ACACAGCTCCTAAGAGGCACCattnga
UTR01_0032_H05.b :                                                             
THY01_0098_G02.b : ctctgcaaatcccggaaaacttgaggggacctcccacccggcttccaaaaagcacccctt
SPL01_0023_C10.b : CTCTGCAGATCCAGGAGACTTGAGGGAGCTCACACACAGCTCCTAAGAGGCACCCATTTG


20110601C-002721 : AGATGCGCTGGCTTTCAGTGCTTCCCACCAGCCTCCCTCCAACTGAGTCCCACTTCCAAG
                   ---------+---------+---------+---------+---------+---------+ 1176
THY01_0031_F09.b : ccacagccttcccctaaaaaaaagggcccccccctttttttgaaaaaaatgtcccccctg
SPLT1_0094_G10.b : gtttagggttcccaaccctcccccaattgattccatttaaaccttactggtcctgcagct
THY01_0032_B07.b : ccctaaaaaaggacccccccattttgaaaatacgccctgggcctttttacagggcttttc
PST01_0064_G11.b : gatgcgctggcttccagtggctccccacagctccctccactgagtccattccaaggcctc
UTR01_0032_H05.b :                                                             
THY01_0098_G02.b : tttaaaagcgccggggttttcatggtttcccccccccccctcccccccaacttgag   
SPL01_0023_C10.b : AGATGCGCTGGCTTTCAGTGCTTCCCACCAGCCTCCCTCCAACTGAGTCCCACTTCCAAG


20110601C-002721 : CCCTCACCTGCTCTCGCCAGCTCACGGGCCACTGCCCATGCCAGGCTCCGGAGTTCCCAG
                   ---------+---------+---------+---------+---------+---------+ 1236
THY01_0031_F09.b : gggggcttttttttttcacggggggggttttt                           
SPLT1_0094_G10.b : tagggccatgccctgccagctccgaatttcaagccatatcctttttaaaaaccccccctc
THY01_0032_B07.b : cccccccaaccccctccccccccccccaaactgggaaat                    
PST01_0064_G11.b : acctgctctggcagctcagggccactgcccaggcaggctccggaattccaggcaataacc
UTR01_0032_H05.b :                                                             
THY01_0098_G02.b :                                                             
SPL01_0023_C10.b : CCCTCACCTGCTCTCGCCAGCTCACGGGCCACTGCCCATGCCAGGCTCCGGAGTTCCCAG


20110601C-002721 : GCCCATCATCCCCTCTTCCAGAACACCCTCCCTCCTCTGTGCCTCGCCATCCTCAGGCTT
                   ---------+---------+---------+---------+---------+---------+ 1296
THY01_0031_F09.b :                                                             
SPLT1_0094_G10.b : tttgcccccacctcagggtttcggccctaaaaaacacgtaaaaaaatttctgaaagggcg
THY01_0032_B07.b :                                                             
PST01_0064_G11.b : ctcttcaaaaaccttcccccttgggctgcatcccaggtttccgcctcagaaaaaaaggga
UTR01_0032_H05.b :                                                             
THY01_0098_G02.b :                                                             
SPL01_0023_C10.b : GCCCATCATCCCCTCTTCCAGAACACCCTCCCTCCTCTGTGCCTCGCCATCCTCAGGCTT


20110601C-002721 : TCCAGGCCTCTAGTAGAACACACGTAGAGCAAAAGCTTCCTGAGGGCAGGCCTGTGCCTC
                   ---------+---------+---------+---------+---------+---------+ 1356
THY01_0031_F09.b :                                                             
SPLT1_0094_G10.b : ttgttctttctcgatacccccaactggggtttgcctcctggaaaacagaaacaatttggg
THY01_0032_B07.b :                                                             
PST01_0064_G11.b : agaaaatttcgagggggggggggctcttttccgggaaccccgaatagggtttgggtcttg
UTR01_0032_H05.b :                                                             
THY01_0098_G02.b :                                                             
SPL01_0023_C10.b : TCCAGGCCTCTAGTAGAACACACGTAGAGCAAAAGCTTCCTGAGGGCAGGCCTGTGCCTC


20110601C-002721 : ATTCT.......................................................
                   ---------+---------+---------+---------+---------+---------+ 1361
THY01_0031_F09.b :                                                             
SPLT1_0094_G10.b : atttcaaagctttttttttgtttttctcaaaaaagacggggtatttatctgcgggg   
THY01_0032_B07.b :                                                             
PST01_0064_G11.b : gaaaacagaaa                                                
UTR01_0032_H05.b :                                                             
THY01_0098_G02.b :                                                             
SPL01_0023_C10.b : ATTCT