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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-003975

Length: 1,051

Sequence [FASTA format sequence]
GTGCTTGTTG GCGGGTGTTT GCGTTGAAAC AACACTGAAG CCGACCTTAA AGGGGAGGGA
ACAAAGAGGG GGAGCCGGGG CCCTTTAAAA CAAGGCGCGC CGGTACCTGC CCCTTTAAGG
GCGGGGCGGC CAGAAGACTG AATCTGAGCC CCAGATTACC CCGAGTTTCC GTCACAGGCT
GCGAGGAAAG GCTTCTTCGC TGGGTCCGGG TGCTTGGCGG CGGCGGCTTC ATCCCCGCTG
GTCCTCCCCG GGCCCGGAGA CACCCCCGCC CCAGTCATGC TGAGCAGAGT ATGGAAGCAG
CTGATTACGA AGTGCTATCC GTGCGAGAGC AGCTATTCCA CGAGAGGGTC CGCGAGTGCA
TTATCTCAAC GCTTCTGTTT GCGACACTCT ACATCCTCTG CCACATCGCC CTGACTCGCT
TCAAGAAGCC TGCTGAGTTC ACCACAGTGG ATGATGAAGA TGCCACAGTC AACAAGATTG
CGCTCGAGCT GTGCACCTTC ACCCTGGCAG TCGCTCTGGG TGCTGTCCTG CTCCTGCCCT
TTTCCATCAT CAGCAATGAG GTGCTGCTCT CACTGCCTCG AAACTACTAC ATCCAGTGGC
TCAACGGCTC CCTCATCCAT GGCCTCTGGA ACCTGGTATT TCTCTTCTCC AACTTGTCCC
TCATCTTCCT CATGCCTTTT GCATACTTCT TCACTGAGTC TGAGGGCTTC GCTGGCTCCA
GAAAGGGTGT CCTGGCCCGG GTCTACGAGA CGGTGGTGAT GTTGATTCTT CTCACTCTGC
TGGTGCTGGG CATGGTGTGG GTGGCATCAG CCATTGTGGA CAACGACAAG GCCAGCAGGG
AGTCCCTCTA TGACTTCTGG GAGTACTACC TCCCCTACCT CTACTCCTGC ATCTCCTTCC
TTGGGGTGCT GCTCCTCCTG GTGTGTACTC CGCTAGGTCT CGCCCGCATG TTCTCCGTCA
CTGGGAAGCT GCTGGTCAAG CCCCGGCTGC TAGAGGACCT GGAGGAGCAG CTGCACTGCT
CAGCCTTTGA GGAGGCAGCT TTGACCCCGC A


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLMBR1Lprotein LMBR1L [Homo sapiens]. 389e-108O
Contig/Assembly ProteinLMBR1limb region 1 protein homolog [Homo sapiens]. 2524e-67O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLmbr1lprotein LMBR1L [Mus musculus]. 392e-109O
Contig/Assembly ProteinLmbr1limb region 1 protein [Mus musculus]. 2471e-65O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC612809PREDICTED: similar to lipocalin-interacting membrane receptor isoform 8 [Canis familiaris]. 395e-110O
Contig/Assembly ProteinLOC612809PREDICTED: similar to lipocalin-interacting membrane receptor isoform 7 [Canis familiaris]. 395e-110O
Contig/Assembly ProteinLOC612809PREDICTED: similar to lipocalin-interacting membrane receptor isoform 6 [Canis familiaris]. 395e-110O
Contig/Assembly ProteinLOC612809PREDICTED: similar to lipocalin-interacting membrane receptor isoform 5 [Canis familiaris]. 395e-110O
Contig/Assembly ProteinLOC612809PREDICTED: similar to lipocalin-interacting membrane receptor isoform 2 [Canis familiaris]. 395e-110O
Contig/Assembly ProteinLOC482819PREDICTED: similar to limb region 1 protein [Canis familiaris]. 2533e-67O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLMBR1limb region 1 protein [Bos taurus]. 2524e-67O
Contig/Assembly ProteinLMBR1PREDICTED: limb region 1 homolog (mouse) [Bos taurus]. 2524e-67O
Contig/Assembly ProteinLMBR1PREDICTED: limb region 1 protein [Bos taurus]. 2524e-67O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100511541PREDICTED: limb region 1 protein homolog [Sus scrofa]. 1484e-36O


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
CLNT10070B05CLNT1_0070_B05.bFS662566 
LVRM10076B07LVRM1_0076_B07.bBP138222 
LVRM10189H10LVRM1_0189_H10.bCJ006249 
OVR010008E04OVR01_0008_E04.bBP143152 AK394778
OVRM10109E05OVRM1_0109_E05.bBP150382 
PCT010016F05PCT01_0016_F05.b  
SPL010057B08SPL01_0057_B08.bCJ018121 
SPLT10095E07SPLT1_0095_E07.bHX246620 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
539C500.625BSCCC/P
G030.375CCG/P


Alignment:      TOP

20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0008_E04.b : cttttagggccctactttacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b :
SPLT1_0095_E07.b :
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b :
20110601C-003975 : ........................................GTGCTTGTTGGCGGGTGTTT
---------+---------+---------+---------+---------+---------+ 20
OVR01_0008_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGCTTGTTGGCGGGTGTTT
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b :
SPLT1_0095_E07.b :
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b :
20110601C-003975 : GCGTTGAAACAACACTGAAGCCGACCTTAAAGGGGAGGGAACAAAGAGGGGGAGCCGGGG
---------+---------+---------+---------+---------+---------+ 80
OVR01_0008_E04.b : GCGTTGAAACAACACTGAAGCCGACCTTAAAGGGGAGGGAACAAAGAGGGGGAGCCGGGG
LVRM1_0076_B07.b : agttgacx
OVRM1_0109_E05.b : tagttgt
CLNT1_0070_B05.b :
SPLT1_0095_E07.b :
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b :
20110601C-003975 : CCCTTTAAAACAAGGCGCGCCGGTACCTGCCCCTTTAAGGGCGGGGCGGCCAGAAGACTG
---------+---------+---------+---------+---------+---------+ 140
OVR01_0008_E04.b : CCCTTTAAAACAAGGCGCGCCGGTACCTGCCCCTTTAAGGGCGGGGCGGCCAGAAGACTG
LVRM1_0076_B07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgaaGACTG
OVRM1_0109_E05.b : cxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGACTG
CLNT1_0070_B05.b : ngggcccgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0095_E07.b : nnnccgcggtt
SPL01_0057_B08.b : nnnnagctaggacttagacxxxxxxxxx
LVRM1_0189_H10.b :
PCT01_0016_F05.b :
20110601C-003975 : AATCTGAGCCCCAGATTACCCCGAGTTTCCGTCACAGGCTGCGAGGAAAGGCTTCTTCGC
---------+---------+---------+---------+---------+---------+ 200
OVR01_0008_E04.b : AATCTGAGCCCCAGATTACCCCGAGTTTCCGTCACAGGCTGCGAGGAAAGGCTTCTTCGC
LVRM1_0076_B07.b : AATCTGAGCCCCAGATTACCCCGAGTTTCCGTCACAGGCTGCGAGGAAAGGCTTCTTCGC
OVRM1_0109_E05.b : AATCTGAGCCCCAGATTACCCCGAGTTTCCGTCACAGGCTGCGAGGAAAGGCTTCTTCGC
CLNT1_0070_B05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTCACAGGCTGCGAGGAAAGGCTTCTTCGC
SPLT1_0095_E07.b : agaggccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCTTCTTCGC
SPL01_0057_B08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCTTCGC
LVRM1_0189_H10.b :
PCT01_0016_F05.b :
20110601C-003975 : TGGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGA
---------+---------+---------+---------+---------+---------+ 260
OVR01_0008_E04.b : TGGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGA
LVRM1_0076_B07.b : TGGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGA
OVRM1_0109_E05.b : TGGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGA
CLNT1_0070_B05.b : TGGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGA
SPLT1_0095_E07.b : TGGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGA
SPL01_0057_B08.b : TGGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGA
LVRM1_0189_H10.b :
PCT01_0016_F05.b :
20110601C-003975 : CACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCC
---------+---------+---------+---------+---------+---------+ 320
OVR01_0008_E04.b : CACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCC
LVRM1_0076_B07.b : CACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCC
OVRM1_0109_E05.b : CACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCC
CLNT1_0070_B05.b : CACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCC
SPLT1_0095_E07.b : CACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCC
SPL01_0057_B08.b : CACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCC
LVRM1_0189_H10.b : cctttgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PCT01_0016_F05.b : nnnngggcgttnn
20110601C-003975 : GTGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTT
---------+---------+---------+---------+---------+---------+ 380
OVR01_0008_E04.b : GTGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTT
LVRM1_0076_B07.b : GTGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTT
OVRM1_0109_E05.b : GTGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTT
CLNT1_0070_B05.b : GTGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTT
SPLT1_0095_E07.b : GTGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTT
SPL01_0057_B08.b : GTGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTT
LVRM1_0189_H10.b : xxxxxxxxxxxxxxxxxxxxcttttctgtgtcagggagtccgATCTCAACGCTTCTGTTT
PCT01_0016_F05.b : nnnnaaactgcgtngtgcactggctttcgtgtcgggagtccgATCTCAACGCTTCTGTTT
20110601C-003975 : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
---------+---------+---------+---------+---------+---------+ 440
OVR01_0008_E04.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
LVRM1_0076_B07.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
OVRM1_0109_E05.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
CLNT1_0070_B05.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
SPLT1_0095_E07.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
SPL01_0057_B08.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
LVRM1_0189_H10.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
PCT01_0016_F05.b : GCGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTC
20110601C-003975 : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
---------+---------+---------+---------+---------+---------+ 500
OVR01_0008_E04.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
LVRM1_0076_B07.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
OVRM1_0109_E05.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
CLNT1_0070_B05.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
SPLT1_0095_E07.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
SPL01_0057_B08.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
LVRM1_0189_H10.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
PCT01_0016_F05.b : ACCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTC
20110601C-003975 : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAG
---------+---------+---------+---------+---------+---------+ 560
OVR01_0008_E04.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAG
LVRM1_0076_B07.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCGTTTTCCATCATCAGCAATGAG
OVRM1_0109_E05.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCGTTTTCCATCATCAGCAATGAG
CLNT1_0070_B05.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAG
SPLT1_0095_E07.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAG
SPL01_0057_B08.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAG
LVRM1_0189_H10.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCGTTTTCCATCATCAGCAATGAG
PCT01_0016_F05.b : ACCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAG
20110601C-003975 : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
---------+---------+---------+---------+---------+---------+ 620
OVR01_0008_E04.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
LVRM1_0076_B07.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
OVRM1_0109_E05.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
CLNT1_0070_B05.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
SPLT1_0095_E07.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
SPL01_0057_B08.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
LVRM1_0189_H10.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
PCT01_0016_F05.b : GTGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
20110601C-003975 : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
---------+---------+---------+---------+---------+---------+ 680
OVR01_0008_E04.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
LVRM1_0076_B07.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
OVRM1_0109_E05.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
CLNT1_0070_B05.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
SPLT1_0095_E07.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
SPL01_0057_B08.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
LVRM1_0189_H10.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
PCT01_0016_F05.b : GGCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTT
20110601C-003975 : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
---------+---------+---------+---------+---------+---------+ 740
OVR01_0008_E04.b : GCATACTTCTTCACTGAGTCTGAGGGTTTCGCTGGCTCCCGAAAGGGTGTCCTGGCCCGG
LVRM1_0076_B07.b : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
OVRM1_0109_E05.b : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
CLNT1_0070_B05.b : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
SPLT1_0095_E07.b : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
SPL01_0057_B08.b : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
LVRM1_0189_H10.b : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
PCT01_0016_F05.b : GCATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGG
20110601C-003975 : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
---------+---------+---------+---------+---------+---------+ 800
OVR01_0008_E04.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
LVRM1_0076_B07.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
OVRM1_0109_E05.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
CLNT1_0070_B05.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
SPLT1_0095_E07.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
SPL01_0057_B08.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
LVRM1_0189_H10.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
PCT01_0016_F05.b : GTCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGG
20110601C-003975 : GTGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTC*TG
---------+---------+---------+---------+---------+---------+ 859
OVR01_0008_E04.b : GTGGCATCCCCCATTGTGGACCACCACAAGGCCAGCAGGGAGTCCCTCTATGACTTCCTG
LVRM1_0076_B07.b : GTGGCATCAGCCATTGTGGACNACGACNAGGCCAGCAGGGAGTCn
OVRM1_0109_E05.b : GTGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTC*TG
CLNT1_0070_B05.b : GTGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTC*TG
SPLT1_0095_E07.b : GTGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTC*TG
SPL01_0057_B08.b : GTGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTC*TG
LVRM1_0189_H10.b : GTGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTC*TG
PCT01_0016_F05.b : GTGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTC*TG
20110601C-003975 : GGAGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCT
---------+---------+---------+---------+---------+---------+ 919
OVR01_0008_E04.b : GGAGTACCACCTCCCCCACCTCTACCCCTGCTTCCCCTTCCTTGGGGTGCTGCTCCcccc
LVRM1_0076_B07.b :
OVRM1_0109_E05.b : GGAGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTT
CLNT1_0070_B05.b : GGAGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCT
SPLT1_0095_E07.b : GGAGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCT
SPL01_0057_B08.b : GGAGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCT
LVRM1_0189_H10.b : GGAGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCT
PCT01_0016_F05.b : GGAGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCT
20110601C-003975 : GGTGTGTACTCCGCTAGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTGGTCAA
---------+---------+---------+---------+---------+---------+ 979
OVR01_0008_E04.b : cggtgtgtcctcccctaggcctccccccccaggttcccccccccctgggaaactctctgg
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : GGTGTGTACTCCGCTAGGTCTCGCCCGCATGTTCTCCGTCACTGGGGAGCTGCTGGTCAA
SPLT1_0095_E07.b : GGTGTGTACTCCGCTAGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTGGTCAA
SPL01_0057_B08.b : GGTGTGTACTCCGCTAGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTGGGTCA
LVRM1_0189_H10.b : GGTGTGTACTCCGCTAAGTCTCGCCCGCATGTTCTCCGCCACTGGGAAGCTGCTGGgcag
PCT01_0016_F05.b : GGTGTGTACTCCGCTAGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTGGTCAA
20110601C-003975 : GCCCCGGCTGCTAGAGGACCTGGAGGAGCAGCTGCACTGCTCAGCCTTTGAGGAGGCAGC
---------+---------+---------+---------+---------+---------+ 1039
OVR01_0008_E04.b : tccaaccccccgcttcctaaaaaacccttgaagaaccccctccccctgctcccccccctt
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : GCCCCGGCTGCTAGAGGACCCTGGAGAGCAGCTGCACTGCTCAGCCTTTGAGGAGGCAGC
SPLT1_0095_E07.b : GCTCCGGCTGCTAGAGGACCTGGAGGAGCAGCTGCACTGCTCAGCCTTTGAGGAGGCAGC
SPL01_0057_B08.b : GCCCCGGCTGCTAGAGGAACTGGAGGAGCAGCTGCACTGCTCAGCCTTTGAGGAGGCAGC
LVRM1_0189_H10.b : ctccggctgctacacggcccggtagaagaacccgcctgcctagcctttgaggacgcaccc
PCT01_0016_F05.b : GCCCCGGCTGCTAGAGGACCTGNNAGAGCAGCTGCACTGCTCAGCCTTTTGAGAGGCAGC
20110601C-003975 : TTTGACCCCGCA................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b : tgaaggaggcacccttttcaccccccccgacgttttccacaccccccccctccccccctt
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : TTTGACCCcgcagatttgcatccnnnactctgctggctgccttggacatgnagctgctgc
SPLT1_0095_E07.b : TTTGAACCCGCAagatttgcaatcccacctcttgctggctgcccttggacatggagctgc
SPL01_0057_B08.b : TTTtgaccgcaggattttgcatcccacctcccgctggctgcccttggacatggagctgct
LVRM1_0189_H10.b : ccgcccatgcagattgccattagagcacccgctggctgccttcgcccca
PCT01_0016_F05.b : TTTGACCCgcangatttngcatcccacctcctgctggctgcccttgnacatggagctgct
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b : gccctcccccccttgaaacatttgaaa
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : acagacaggtctggctctgcagaacagagggtctgctgnagaaacgcggaaggctcacct
SPLT1_0095_E07.b : tgcacaaacaggtcctggctctgcaaacccaagggtcctcttgagtatgggggtgggtaa
SPL01_0057_B08.b : gcacaaaccggtcctggcttcgcagaccccaaagggtcctgcctgaaaaaaccggcggaa
LVRM1_0189_H10.b :
PCT01_0016_F05.b : gcacagaacagtcctggctctgcagacacagaaggtcctgctgnaaaanncgcngaaagc
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : ggcagcggaactgggctatccctggcatgctgtgctgctgatctgacgggcttctgggct
SPLT1_0095_E07.b : ggattgggaatcctggttttccccaggaaagggccccctctatcaggcccttgctaaagg
SPL01_0057_B08.b : agctttcaaccctgggcgcggaaccctgggcctatcccctgggccatggctgggcctggc
LVRM1_0189_H10.b :
PCT01_0016_F05.b : ttcanccctgcaaccgaacctgggctatcccctgggcatgctgggcttgctgatactgac
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : atcntggcatccaatctgaactgccatcatgaggtgcatgcccggggctgcaggggcctc
SPLT1_0095_E07.b : cttccatccttgtaaagagaaccgccggagggttcaccttggcacggaaccggggctttc
SPL01_0057_B08.b : gggaaac
LVRM1_0189_H10.b :
PCT01_0016_F05.b : nggcctgtctgtgctctccgggccattcaaatctggaactgctcatcaatgaagctgcat
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : cttggcagttcctttccacggggcccttgggcccctcggggaaccacttccggaggggcc
SPLT1_0095_E07.b : cccggaaggatggtcttgagatatgaagggctgttgggttctagaggccctcaattcaga
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : gcccccgggcatgcagggggcctcctggggccagtccccttcccaagctgggttctttgg
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : cgcggggatcaagtcccccctccgggagggcccagggcaaacccttacaaattggaaggt
SPLT1_0095_E07.b : acttctaataataaggtgccagccgcggggtgacggggcttcctggacagtttctttctc
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : gggcggccttcaggtggaccctcctttaccgaagggggccccggccggggatcccacgtt
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : tttttcgggaaaaatttcttttctcacgggggctctttccggggtatggaagtggggttt
SPLT1_0095_E07.b : aaggggctctttggcggtgttaggtgtgccatttatccagatgtcccgagcggagatgac
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : ccccccttccgggaaaggggcccaaaggcccaacaaccttacccaaattttggaaccggt
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b : atttttcaagaccgcgccctcttggaaaatagtgggaaag
SPLT1_0095_E07.b : atgcccattcggggagtggctttagaagatcactgtgaaagtttagaatgttgttcggtc
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : ttttccccgggtaaaaaaaacttttggttttcccaaaacggggggcccccttttaaccgg
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b :
SPLT1_0095_E07.b : ttaataattcgtccctctcacatgtactcatatgtcgtggtgtcaggagtgtagtacagt
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : ggaattttgccccccgggggggaattttaaatgggccaaaaaagctctcgacgcccccct
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b :
SPLT1_0095_E07.b : agcatgtgaacgaggcgtactagtgagaactggctgagaatctatgcaactaattt
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : cttggggaaaactcctttgtgggaaaaaaaaccttttggaaaaaatatcttttttttcct
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b :
SPLT1_0095_E07.b :
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : tttaaaaaacacctcccccgggagaaaaaattttcccccccccgggggccccctttgggg
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b :
SPLT1_0095_E07.b :
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : ggaaggggaaaacctctccnnnnngttcgtaaatttattccttttccccnaaaaaaaaaa
20110601C-003975 : ............................................................
---------+---------+---------+---------+---------+---------+ 1051
OVR01_0008_E04.b :
LVRM1_0076_B07.b :
OVRM1_0109_E05.b :
CLNT1_0070_B05.b :
SPLT1_0095_E07.b :
SPL01_0057_B08.b :
LVRM1_0189_H10.b :
PCT01_0016_F05.b : acaac