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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-007063

Length: 977

Sequence [FASTA format sequence]
GGGATCAGGG CTCCTCCGTT CACAGCTGAC CATGAGGTTC CCTGCTCAGC TCCTGGGGCT
CCTCCTGCTC TGGGTCCCAG GATCCGATGG GGCCATTGTG CTGACCCAGA CTCCACTCTC
CCTGTCAGTC AGCCCTGGAG AGCCGGCCTC CATCTCCTGC AGGTCCAGTC AGAGCCTCCT
ACACACTGAT GGAAAGAATT ATTTGAATTG GTACCTGCAG AAACCAGGCC AGTCTCCACA
GCGATTGATC TATCAGGCTA CCAACAGGGA TACTGGGGTC CCAGACAGGT TCAGTGGCAG
TGGATCAGGC ACAGATTTCA CCCTGAAAAT CAGCAGGGTG GAGGCTGAGG ATGTGGGAGT
TTATTACTGT TTTCAAGCTT TACAATCTCC TCATGGTTTC GGCGCGGGGA CCAAGCTGGA
GCTCAAACGG GCTGATGCCA AGCCATCCGT CTTCATCTTC CCGCCATCGA AGGAGCAGTT
AGAGACCCAA ACTGTCTCTG TGGTGTGCTT GCTCAATAGC TTCTTCCCCA GAGAAGTCAA
TGTCAAGTGG AAAGTGGATG GGGTGGTCCA AAGCAGTGGC ATCCTGGATA GTGTCACAGA
GCAGGACAGC AAGGACAGCA CCTACAGCCT CAGCAGCACC CTCTCGCTGC CCACGTCACA
GTACCTAAGT CATAATTTAT ATTCCTGTGA GGTCACCCAC AAGACCCTGG CCTCCCCTCT
GGTCAAAAGC TTCAACAGGA ACGAGTGTGA GGCTTAGAGG CCCACAGGCC CCTGGCCTGC
CTCCAGCCCC AGCCCCCCTC CCCACCTCAG GCCTCAGGCC CTTTCCCCAG AAGATCCTTG
GCAATCCCCC AGCCCCTCTT CCCTCCTCAT CCCCTCCCCC TCTTTGGCTT TAACCGTGTT
AATACTGCGG GGGGGGGGGG AATGAATAAA TAAAGTGAAC CTTTGCACCT GTAAAAAAAA
AAAAAAAAAA AAAAAAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100653210PREDICTED: ig kappa chain V-III region VG-like [Homo sapiens]. 1371e-32O
Contig/Assembly ProteinLOC100652743PREDICTED: ig kappa chain V-III region VH-like [Homo sapiens]. 1341e-31O
Contig/Assembly ProteinLOC100291786PREDICTED: ig kappa chain V-III region VH-like [Homo sapiens]. 1302e-30O
Contig/Assembly ProteinLOC100291786PREDICTED: ig kappa chain V-III region VH-like [Homo sapiens]. 1242e-28
Contig/Assembly ProteinLOC100130100PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 1193e-27O
Contig/Assembly ProteinLOC100130100PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 1193e-27O
Contig/Assembly ProteinLOC100287723PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 1127e-25O
Contig/Assembly ProteinLOC642424PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 1124e-25
Contig/Assembly ProteinLOC642424PREDICTED: hypothetical protein LOC642424 [Homo sapiens]. 1124e-25
Contig/Assembly ProteinLOC642838PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 1101e-24


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC620017PREDICTED: similar to Ig kappa chain V-V region L7 precursor [Mus musculus]. 1172e-26
Contig/Assembly ProteinIgll1immunoglobulin lambda-like polypeptide 1 [Mus musculus]. 58.96e-09O
Contig/Assembly ProteinSirpatyrosine-protein phosphatase non-receptor type substrate 1 isoform 1 [Mus musculus]. 572e-08
Contig/Assembly ProteinSirpatyrosine-protein phosphatase non-receptor type substrate 1 isoform 1 [Mus musculus]. 572e-08
Contig/Assembly ProteinLOC100038947signal-regulatory protein beta 1-like [Mus musculus]. 55.85e-08O
Contig/Assembly ProteinSirpb1asignal-regulatory protein beta 1 [Mus musculus]. 53.92e-07O
Contig/Assembly ProteinSirpb1bsignal-regulatory protein beta 1B [Mus musculus]. 52.84e-07O
Contig/Assembly ProteinVpreb3pre-B lymphocyte protein 3 [Mus musculus]. 50.82e-06O
Contig/Assembly ProteinVpreb1immunoglobulin iota chain precursor [Mus musculus]. 50.13e-06O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC607996PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor, partial [Canis familiaris]. 1955e-50
Contig/Assembly ProteinLOC608379PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor [Canis familiaris]. 1956e-50O
Contig/Assembly ProteinLOC491686PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor [Canis familiaris]. 1941e-49
Contig/Assembly ProteinLOC609845PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor, partial [Canis familiaris]. 1911e-48
Contig/Assembly ProteinLOC608202PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor [Canis familiaris]. 1902e-48
Contig/Assembly ProteinLOC491492PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor [Canis familiaris]. 1902e-48
Contig/Assembly ProteinLOC608854PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor, partial [Canis familiaris]. 1886e-48O
Contig/Assembly ProteinLOC611931PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor [Canis familiaris]. 1819e-46O
Contig/Assembly ProteinLOC611902PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor [Canis familiaris]. 1802e-45O
Contig/Assembly ProteinLOC610282PREDICTED: similar to Ig kappa chain V-II region RPMI 6410 precursor [Canis familiaris]. 1802e-45


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100141470PREDICTED: IGK protein-like [Bos taurus]. 2311e-60O
Contig/Assembly ProteinLOC100141470PREDICTED: IGK protein-like [Bos taurus]. 2311e-60O
Contig/Assembly ProteinLOC100335786PREDICTED: IGK protein-like [Bos taurus]. 1702e-42O
Contig/Assembly ProteinLOC100299426PREDICTED: IGK protein-like [Bos taurus]. 1672e-41O
Contig/Assembly ProteinLOC100299426PREDICTED: IGK protein-like [Bos taurus]. 1672e-41O
Contig/Assembly ProteinLOC100335849PREDICTED: IGK protein-like [Bos taurus]. 1648e-41O
Contig/Assembly ProteinLOC100335802PREDICTED: IGK protein-like [Bos taurus]. 1625e-40O
Contig/Assembly ProteinLOC100335767PREDICTED: IGK protein-like [Bos taurus]. 1625e-40O
Contig/Assembly ProteinLOC100335748PREDICTED: IGK protein-like [Bos taurus]. 1625e-40O
Contig/Assembly ProteinLOC616727PREDICTED: immunoglobulin lambda-like polypeptide 1-like [Bos taurus]. 1263e-29O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100625068PREDICTED: ig kappa chain V-II region RPMI 6410-like [Sus scrofa]. 1892e-48O
Contig/Assembly ProteinLOC100625156PREDICTED: ig kappa chain V-II region RPMI 6410-like [Sus scrofa]. 1862e-47O
Contig/Assembly ProteinLOC100625243PREDICTED: ig kappa chain V-II region RPMI 6410-like [Sus scrofa]. 1749e-44O
Contig/Assembly ProteinLOC100621525PREDICTED: immunoglobulin lambda-like polypeptide 5-like [Sus scrofa]. 1362e-32O
Contig/Assembly ProteinLOC100624983PREDICTED: ig kappa chain V-I region HK102-like [Sus scrofa]. 1193e-27O
Contig/Assembly ProteinLOC100624691PREDICTED: ig kappa chain V-I region HK102-like [Sus scrofa]. 1193e-27O
Contig/Assembly ProteinLOC100152327immunoglobulin lambda-like polypeptide 5 [Sus scrofa]. 1162e-26O
Contig/Assembly ProteinLOC100623670PREDICTED: hypothetical protein LOC100623670 [Sus scrofa]. 88.26e-18O
Contig/Assembly ProteinLOC100623458PREDICTED: ig lambda chain V-III region SH-like [Sus scrofa]. 86.32e-17O
Contig/Assembly ProteinLOC100622797PREDICTED: hypothetical protein LOC100622797 [Sus scrofa]. 74.77e-14


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
SPLT10006C08SPLT1_0006_C08.bHX239667 
SPLT10014C04SPLT1_0014_C04.bHX240257 
SPLT10032B04SPLT1_0032_B04.bHX241642 
SPLT10082C06SPLT1_0082_C06.bHX245584 
SPLT10087A05SPLT1_0087_A05.bHX245946 
SPLT10089H07SPLT1_0089_H07.bHX246167 

  

SNPs: 4      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
391G200.333WSCCG/P
T400.667CCT/P
392A200.333WNAAT/N
C400.667CAT/H
393A300.600WNCAT/H
C200.400CCT/P
394G200.333WNCAG/Q
T400.667CAT/H


Alignment:      TOP

20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPLT1_0082_C06.b : ncctttgagagggncgcggtacaggccgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0089_H07.b : nncgcgagtagaggccgtagtatttatxxxxxxxxxxxxxxxxxxxxx
SPLT1_0032_B04.b : nttttcgacggtagacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0087_A05.b : nnnaagcgagtagacgccactaxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0006_C08.b : nnnaagcgagtagaggccgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0014_C04.b :
20110601C-007063 : ........GGGATCAGGGCTCCTCCGTTCACAGCTGACCATGAGGTTCCCTGCTCAGCTC
---------+---------+---------+---------+---------+---------+ 52
SPLT1_0082_C06.b : xxxxxxxxGTGATCAGGGCTCCTCCGTTCACAGCTGACCATGAGGTTCCCTGCTCAGCTC
SPLT1_0089_H07.b : xxxxxxxxGTGATCAGGGCTCCTCCGTTCACAGCTGACCATGAGGTTCCCTGCTCAGCTC
SPLT1_0032_B04.b : xxxxxxxxxGGATCAGGGCTCCTCCGTTCACAGCTGACCATGAGGTTCCCTGCTCAGCTC
SPLT1_0087_A05.b : xxxxxxxxxGGATCAGGGCTCCTCCGTTCACAGCTGACCATGAGGTTCCCTGCTCAGCTC
SPLT1_0006_C08.b : xxxxxxxxxGGATCAGGGCTCCTCCGTTCACAGCTGACCATGAGGTTCCCTGCTCAGCTC
SPLT1_0014_C04.b :
20110601C-007063 : CTGGGGCTCCTCCTGCTCTGGGTCCCAGGATCCGATGGGGCCATTGTGCTGACCCAGACT
---------+---------+---------+---------+---------+---------+ 112
SPLT1_0082_C06.b : CTGGGGCTCCTCCTGCTCTGGGTCCCAGGATCCGATGGGGCCATTGTGCTGACCCAGACT
SPLT1_0089_H07.b : CTGGGGCTCCTCCTGCTCTGGGTCCCAGGATCCGATGGGGCCATTGTGCTGACCCAGACT
SPLT1_0032_B04.b : CTGGGGCTCCTCCTGCTCTGGGTCCCAGGATCCGATGGGGCCATTGTGCTGACCCAGACT
SPLT1_0087_A05.b : CTGGGGCTCCTCCTGCTCTGGGTCCCAGGATCCGATGGGGCCATTGTGCTGACCCAGACT
SPLT1_0006_C08.b : CTGGGGCTCCTCCTGCTCTGGGTCCCAGGATCCGATGGGGCCATTGTGCTGACCCAGACT
SPLT1_0014_C04.b :
20110601C-007063 : CCACTCTCCCTGTCAGTCAGCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCCAGTCAG
---------+---------+---------+---------+---------+---------+ 172
SPLT1_0082_C06.b : CCACTCTCCCTGTCAGTCAGCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCCAGTCAG
SPLT1_0089_H07.b : CCACTCTCCCTGTCAGTCAGCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCCAGTCAG
SPLT1_0032_B04.b : CCACTCTCCCTGTCAGTCAGCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCCAGTCAG
SPLT1_0087_A05.b : CCACTCTCCCTGTCAGTCAGCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCCAGTCAG
SPLT1_0006_C08.b : CCACTCTCCCTGTCAGTCAGCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCCAGTCAG
SPLT1_0014_C04.b :
20110601C-007063 : AGCCTCCTACACACTGATGGAAAGAATTATTTGAATTGGTACCTGCAGAAACCAGGCCAG
---------+---------+---------+---------+---------+---------+ 232
SPLT1_0082_C06.b : AGCCTCCTACACACTGATGGAAAGAATTATTTGAATTGGTACCTGCAGAAACCAGGCCAG
SPLT1_0089_H07.b : AGCCTCCTACACACTGATGGAAAGAATTATTTGAATTGGTACCTGCAGAAACCAGGCCAG
SPLT1_0032_B04.b : AGCCTCCTACACACTGATGGAAAGAATTATTTGAATTGGTACCTGCAGAAACCAGGCCAG
SPLT1_0087_A05.b : AGCCTCCTACACACTGATGGAAAGAATTATTTGAATTGGTACCTGCAGAAACCAGGCCAG
SPLT1_0006_C08.b : AGCCTCCTACACACTGATGGAAAGAATTATTTGAATTGGTACCTGCAGAAACCAGGCCAG
SPLT1_0014_C04.b :
20110601C-007063 : TCTCCACAGCGATTGATCTATCAGGCTACCAACAGGGATACTGGGGTCCCAGACAGGTTC
---------+---------+---------+---------+---------+---------+ 292
SPLT1_0082_C06.b : TCTCCACAGCGATTGATCTATCAGGCTACCAACAGGGATACTGGGGTCCCAGACAGGTTC
SPLT1_0089_H07.b : TCTCCACAGCGATTGATCTATCAGGCTACCAACAGGGATACTGGGGTCCCAGACAGGTTC
SPLT1_0032_B04.b : TCTCCACAGTCTTTGATCTATCAGACTACCAACAGGGATACTGGGGTCCCAGACAGGTTC
SPLT1_0087_A05.b : TCTCCACAGCGATTGATCTATCAGGCTACCAACAGGGATACTGGGGTCCCAGACAGGTTC
SPLT1_0006_C08.b : TCTCCACAGCGATTGATCTATCAGGCTACCAACAGGGATACTGGGGTCCCAGACAGGTTC
SPLT1_0014_C04.b : nnnncgacagtacgaxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-007063 : AGTGGCAGTGGATCAGGCACAGATTTCACCCTGAAAATCAGCAGGGTGGAGGCTGAGGAT
---------+---------+---------+---------+---------+---------+ 352
SPLT1_0082_C06.b : AGTGGCAGTGGATCAGGCACAGATTTCACCCTGAAAATCAGCAGGGTGGAGGCTGAGGAT
SPLT1_0089_H07.b : AGTGGCAGTGGATCAGGCACAGATTTCACCCTGAAAATCAGCAGGGTGGAGGCTGAGGAT
SPLT1_0032_B04.b : AGTGGCAGTGGATCAGGCACAGATTTCACCCTGAAAATCAGCAGGGTGGAGGCTGAGGAT
SPLT1_0087_A05.b : AGTGGCAGTGGATCAGGCACAGATTTCACCCTGAAAATCAGCAGGGTGGAGGCTGAGGAT
SPLT1_0006_C08.b : AGTGGCAGTGGATCAGGCACAGATTTCACCCTGAAAATCAGCAGGGTGGAGGCTGAGGAT
SPLT1_0014_C04.b : xxxxxxxxxxxxxxxxxxxxxGATTTCACCCTGAAAATCAGCAGGGTGGAGGCTGAGGAT
20110601C-007063 : GTGGGAGTTTATTACTGTTTTCAAGCTTTACAATCTCCTCATGGTTTCGGCGCGGGGACC
---------+---------+---------+---------+---------+---------+ 412
SPLT1_0082_C06.b : GTGGGAGTTTATTACTGTTTTCAAGCTTTACAATCTCCTCCGGGTTTCGGCGCGGGGACC
SPLT1_0089_H07.b : GTGGGAGTTTATTACTGTTTTCAAGCTTTACAATCTCCTCCGGGTTTCGGCGCGGGGACC
SPLT1_0032_B04.b : GTGGGAGTTTATTACTGTTTTCAAGCTTTACAATCTCCTCATGGTTTCGGCGCGGGGACC
SPLT1_0087_A05.b : GTGGGAGTTTATTACTGTTTTCAAGCTTTACAATCTCCGAATGGTTTCGGCGCGGGGACC
SPLT1_0006_C08.b : GTGGGAGTTTATTACTGTTTTCAAGCTTTACAATCTCCTCATGGTTTCGGCGCGGGGACC
SPLT1_0014_C04.b : GTGGGAGTTTATTACTGTTTTCAAGCTTTACAACGTCCGAGTGGTTTCGGCGCGGGGACC
20110601C-007063 : AAGCTGGAGCTCAAACGGGCTGATGCCAAGCCATCCGTCTTCATCTTCCCGCCATCGAAG
---------+---------+---------+---------+---------+---------+ 472
SPLT1_0082_C06.b : AAGCTGGAGCTCAAACGGGCTGATGCCAAGCCATCCGTCTTCATCTTCCCGCCATCGAAG
SPLT1_0089_H07.b : AAGCTGGAGCTCAAACGGGCTGATGCCAAGCCATCCGTCTTCATCTTCCCGCCATCGAAG
SPLT1_0032_B04.b : AAGCTGGAGCTCAAACGGGCTGATGCCAAGCCATCCGTCTTCATCTTCCCGCCATCGAAG
SPLT1_0087_A05.b : AAGCTGGAGCTCAAACGGGCTGATGCCAAGCCATCCGTCTTCATCTTCCCGCCATCGAAG
SPLT1_0006_C08.b : AAGCTGGAGCTCAAACGGGCTGATGCCAAGCCATCCGTCTTCATCTTCCCGCCATCGAAG
SPLT1_0014_C04.b : AAGCTGGAGCTCAAACGGGCTGATGCCAAGCCATCCGTCTTCATCTTCCCGCCATCGAAG
20110601C-007063 : GAGCAGTTAGAGACCCAAACTGTCTCTGTGGTGTGCTTGCTCAATAGCTTCTTCCCCAGA
---------+---------+---------+---------+---------+---------+ 532
SPLT1_0082_C06.b : GAGCAGTTAGAGACCCAAACTGTCTCTGTGGTGTGCTTGCTCAATAGCTTCTTCCCCAGA
SPLT1_0089_H07.b : GAGCAGTTAGAGACCCAAACTGTCTCTGTGGTGTGCTTGCTCAATAGCTTCTTCCCCAGA
SPLT1_0032_B04.b : GAGCAGTTAGAGACCCAAACTGTCTCTGTGGTGTGCTTGCTCAATAGCTTCTTCCCCAGA
SPLT1_0087_A05.b : GAGCAGTTAGAGACCCAAACTGTCTCTGTGGTGTGCTTGCTCAATAGCTTCTTCCCCAGA
SPLT1_0006_C08.b : GAGCAGTTAGAGACCCAAACTGTCTCTGTGGTGTGCTTGCTCAATAGCTTCTTCCCCAGA
SPLT1_0014_C04.b : GAGCAGTTAGAGACCCAAACTGTCTCTGTGGTGTGCTTGCTCAATAGCTTCTTCCCCAGA
20110601C-007063 : GAAGTCAATGTCAAGTGGAAAGTGGATGGGGTGGTCCAAAGCAGTGGCATCCTGGATAGT
---------+---------+---------+---------+---------+---------+ 592
SPLT1_0082_C06.b : GAAGTCAATGTCCAGTGGAAAGTGGATGGGGTGGTCCAAAGCAGTGGCATCCTGGATAGT
SPLT1_0089_H07.b : GAAGTCAATGTCAAGTGGAAAGTGGATGGGGTGGTCCAAAGCAGTGGCATCCTGGATAGT
SPLT1_0032_B04.b : GAAGTCAATGTCAAGTGGAAAGTGGATGGGGTGGTCCAAAGCAGTGGCATCCTGNATAGT
SPLT1_0087_A05.b : GAAGTCAATGTCAAGTGGAAAGTGGATGGGGTGGTCCAAAGCAGTGGCATCCTGGATAGT
SPLT1_0006_C08.b : GAAGTCAATGTCAAGTGGAAAGTGGATGGGGTGGTCCAAAGCAGTGGCATCCTGGATAGT
SPLT1_0014_C04.b : GAAGTCAATGTCAAGTGGAAAGTGGATGGGGTGGTCCAAAGCAGTGGCATCCTGGATAGT
20110601C-007063 : GTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTCTCGCTGCCC
---------+---------+---------+---------+---------+---------+ 652
SPLT1_0082_C06.b : GTCACAGAAGCAGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCTTCTCGCTGCCC
SPLT1_0089_H07.b : GTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTCTCGCTGCCC
SPLT1_0032_B04.b : GTCACAAAGCAGGACAGCAAAGACAGCACCTACAGCCTCAGCAGCACCCTCTCGCTGCCC
SPLT1_0087_A05.b : GTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTCTCGCTGCCC
SPLT1_0006_C08.b : GTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTCTCGCTGCCC
SPLT1_0014_C04.b : GTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTCTCGCTGCCC
20110601C-007063 : ACGTCACAGTACCTAAGTCATAATTTATATTCCTGTGAGGTCACCCACAAGACCCTGGCC
---------+---------+---------+---------+---------+---------+ 712
SPLT1_0082_C06.b : ACGTCACAGTAACTAAGTCATAATTTAAATTCCTGTGAAGgtccccaccaaaaccctggc
SPLT1_0089_H07.b : ACGTCACAGTACCTAAGTCATAATTTATATTCCTGTGAGGTCACCCACAAGACCCTGGCC
SPLT1_0032_B04.b : ACGTCACAGTACCTAAGTCATAATTTATATTCCTGTGAGGTCACCCACAAGACCCTGGCC
SPLT1_0087_A05.b : ACGTCACAGTACCTAAGTCATAATTTATATTCCTGTGAGGTCACCCACAAGACCCTGGCC
SPLT1_0006_C08.b : ACGTCACAGTACCTAAGTCATAATTTATATTCCTGTGAGGTCACCCACAAGACCCTGGCC
SPLT1_0014_C04.b : ACGTCACAGTACCTAAGTCATAATTTATATTCCTGTGAGGTCACCCACAAGACCCTGGCC
20110601C-007063 : TCCCCTCTGGTCAAAAGCTTCAACAGGAACGAGTGTGAGGCTTAGAGGCCCACAGGCCCC
---------+---------+---------+---------+---------+---------+ 772
SPLT1_0082_C06.b : cctcccctccgggtcaaaagcttcaacaggaaacaattgtgaaggtttaaaggcccacag
SPLT1_0089_H07.b : TCCCCTCTGGTCAAAAGCTTCAACAGGAACGAGTGTGAGGCTTAGAGGCCCACAGGCCCC
SPLT1_0032_B04.b : TCCCCTCCGGTCAAAAGC*TCAACAGGAACGAATGTGAAGGCTAAAAGCCCACAGGCCCC
SPLT1_0087_A05.b : TCCCCTCTGGTCAAAAGCTTCAACAGGAACGAGTGTGANGCTTAGAGGCCCACAGGCCCC
SPLT1_0006_C08.b : TCCCCTCTGGTCAAAAGCTTCAACAGGAACGAGTGTGAGGCTTAGAGGCCCACAGGCCCC
SPLT1_0014_C04.b : TCCCCTCTGGTCAAAAGCTTCAACAGGAACGAGTGTGAGGCTTAGAGGCCCACAGGCCCC
20110601C-007063 : TGGCCTGCCTCCAGCCCCAGCCCCCCTCCCCACCTCAGGCCTCAGGCCCTTTCCCCAGAA
---------+---------+---------+---------+---------+---------+ 832
SPLT1_0082_C06.b : ggcccctgggctggctttccagccccacccccccttcccaacttagggcttcagggcctt
SPLT1_0089_H07.b : TGGCCTGCCTCCAGCCCCAGCCCCCCTCCCCACCTCAGGCCTCAGGCCCTTTCCCCAGAA
SPLT1_0032_B04.b : TGGCCTTGCCTCAGCCCCAGCCCCCCCTCCCACCTAAGGCCCAGGCCC**TTCCCCAAAA
SPLT1_0087_A05.b : TGGCCTGCCTCCAGCCCCAGCCCCCCTCCCCACCTCAGGCCTCAGGCCCTTTCCC*AGAA
SPLT1_0006_C08.b : TGGCCTGCCTCAAGCCCCAGCCCCCCTCCCCCACTCAGGCCTCAGGCCCTTTTCCCAGAA
SPLT1_0014_C04.b : TGGCCTGCCTCCAGCCCCAGCCCCCCTCCCCACCTCAGGCCTCAGGCCCTTTCCCCAGAA
20110601C-007063 : GATCCTTGGCAATCCCCCAGCCCCTCTTCCCTCCTCATCCCCTCCCCC*TCTTTGGCTTT
---------+---------+---------+---------+---------+---------+ 891
SPLT1_0082_C06.b : tttccccagaaaaatcctttggaaaatccccccagcccccttttttcctcctcttttccc
SPLT1_0089_H07.b : GATCCTTGGCAATCCCCCAGCCCCTCTTCCCTCCTCATCCCCTCCCCC*TCTTTGGCTTT
SPLT1_0032_B04.b : AATCCTTGGCAACCCCCAACCCCTCTTtccttcctatcccctccccctctttgctttaac
SPLT1_0087_A05.b : GATCCTTGGCA*TCCCCCAGCCCCTCTTCCCTCCTCAT*CCCTCCCCC*TCTTTGGCTTT
SPLT1_0006_C08.b : GATCCTTGGCAAATCCCCAGCCCCTCTTCCCTCCTCATCCCCTCCCCCCTCTTTGGCTTT
SPLT1_0014_C04.b : GATCCTTGGCAATCCCCCAGCCCCTCTTCCCTCCTCATCCCCTCCCCC*TCTTTGGCTTT
20110601C-007063 : AACCGTGTTAATACTGCGGGGGGGGGGGG**AATGAATAAATAAAGTGAA*CCTTTGCAC
---------+---------+---------+---------+---------+---------+ 948
SPLT1_0082_C06.b : ctcccccccttttttggggttttaaccgcgggtttaaaacctcccccggggggggggggg
SPLT1_0089_H07.b : AACGGTTTNAATACTGCGGGGGGGGGGGGG*AATGAATAAATAAAGTGAA*********C
SPLT1_0032_B04.b : cggtttataccgccgggggggggggaaaaaaaaaaaaaaattacccttccccctttnnnn
SPLT1_0087_A05.b : AACCGTG*TAATACTGCGGGGGGGGGGGG**AATGAATAATTAAAGTGAACCTTTCACCT
SPLT1_0006_C08.b : AACCGTGTTAATACTGCGGGGGGGGGGGGGGAATGAATAAATAAAGTGGAACCTTTGCCC
SPLT1_0014_C04.b : AACCGTGTTAATACTGCGGGGGGGGGGGG**AATGAATAAATAAAGTGAA*CCTTTGCAC
20110601C-007063 : CTGTAAAAAAAAAAAAAAAAAAAAAAAAA...............................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b : aaaaaaaaaaaaataaagtggggacacccttttaaaaaaaaaaaaaaa
SPLT1_0089_H07.b : CTTTAAAAAAAAAAAAAA
SPLT1_0032_B04.b : nnnannnnnnnnanannnnnnnnannnnnnnnnnnannnnnnnnnnannnnannnnnnnn
SPLT1_0087_A05.b : GTGAAAAAAAAAAA
SPLT1_0006_C08.b : CTGTaaaaaaaaaaaaaaaaaaaaaaaaattaaannaaaanaaanaaaaannnnannaaa
SPLT1_0014_C04.b : CTGTAAAAAAAAAAAAAAAAAA
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b : nnnancnncgcncggnaccccnnngagngnaaaanannnnnnnnnncnncccccnnnctt
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : ccncccccgcccccccacctccttaaaggaatatttttttccccccccagattccctttt
SPLT1_0014_C04.b :
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b : nnnancacccaaaanangnnaaaaannnttttttttatcttnnaacaannnnntataaaa
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : aggggggttttggcacccccaaaataaaaagccttagaggaggttgtcaccaccaaacag
SPLT1_0014_C04.b :
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b : aaaanaacnnaaaaannnnacacctttttttttttannnnnnnnaannnaagaacttttc
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : agcgggccataataattcttattttaacaagatggaaacaatttttatattaaaacacta
SPLT1_0014_C04.b :
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b : tttanttanccgcnncggannnnnnnnnnnnnnnnccccnnnaaatctcttctcttaatt
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : tatcttctgaagaaacgagcgaggagggtgggggttttttttttttctagtgaggagagg
SPLT1_0014_C04.b :
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b : tgnnnnnnnnnnnnnnnnnnnnnnnnnn
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : ggggcgagtatttctcttttaaaccgcccccgccccgcatactctatttatattctctgt
SPLT1_0014_C04.b :
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b :
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : aatctttctctgcgactatttttcttgcgcgggtggtggttgtcctcccgccggcgatta
SPLT1_0014_C04.b :
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b :
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : taatatctaccacgccgagatctgaaataatgacatctcgaatcttgcatctcgcgcagt
SPLT1_0014_C04.b :
20110601C-007063 : ............................................................
---------+---------+---------+---------+---------+---------+ 977
SPLT1_0082_C06.b :
SPLT1_0089_H07.b :
SPLT1_0032_B04.b :
SPLT1_0087_A05.b :
SPLT1_0006_C08.b : ttttttatattctctcggcagacaggcagtacgaatcctcccc
SPLT1_0014_C04.b :