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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-007964

Length: 1,008

Sequence [FASTA format sequence]
AGTCAGGGAC AGTCAGCCAT CCAGAAGCCC GTGCACCATG ACGGTCCCTG CCCTGGCCAG
TGTCTCTGGG CTCCTGCAGG TGGCCTCCCT GCTCGGGCTG CTGCTACTTC TCCTCAAGGC
AGCACAGCTC TACCTGCGCA GGCAGTGGCT GCTCAAAGCC CTCCAGCAGT TCCCGTCCCC
TCCTTCCCAC TGGCTCTATG GACACAGCAG GGAGTTTCAA GAGGAAAGCG AGCTGCAACC
CCTCCTGAAA AGGGTAGAGA AATACCCAAG TGCCTGTGCT CGCTGGCTGT GGGGAACAAG
AGCCATGGTA CTGGTCTATG ACCCTGACTA CATGAAGGTG GTCCTGGCGA GATCAGACCC
CAAGACTTCT GTTGTCTACA GATTGCTGAT CCCCTGGATT GGCTGTGGTT TGCTCCTGTT
GAATGGGCAG ACGTGGTTCC AGCGTCGGCG GATGCTGACC CCAGCCTTCC ACTATGACAT
CCTGAAGCCC TACGTAGGTC TCATGGCCAA GTCTGTCCAA GTGATGCTGG ACAAGTGGGA
GCAGCTCGTC GCCCAGGACC CACGTCTGGA GATCGTGGGA CCCGTCTCCT TGATGACCCT
GGACACCATC ATGAAGTGCG CCTTCAGCCA CCAGGGCAGC GTCCAGACAG ACGGGGATTC
CCACTCCTAC ATCCAGGCCA TTTGGGATCT CAAAAATCTC TTTTCTACCC GTACGAAGAG
TGCCTTTCTC CAGAATGACA TCATCTACAG GCTGAGCCCT GAAAGCCATA AGAACCACCG
TGCCGCCAGG ATAGCCCATC AACACACAGA CCGAGTGATC CAGCTGCGGA AGGCGCAGCT
GCAAAAGCAG GGAAAAATGG AGAACGTGAG GAAGAAGAGG CACTTGGATT TCCTGAACAT
CCTCCTCCTT GCCCAAATGG AGAAGGGGAA CAGCTTGTCG GACACCGACC TCCCGTGCGA
AGTGGACACG TTCATGTTCG AGGNTCATGN ACACACAGCC AGTGGCAT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP4A11cytochrome P450 4A11 [Homo sapiens]. 421e-118O
Contig/Assembly ProteinCYP4A22cytochrome P450 4A22 precursor [Homo sapiens]. 400e-111O
Contig/Assembly ProteinCYP4B1cytochrome P450 4B1 isoform b [Homo sapiens]. 2571e-68O
Contig/Assembly ProteinCYP4B1cytochrome P450 4B1 isoform a [Homo sapiens]. 2571e-68O
Contig/Assembly ProteinCYP4X1cytochrome P450 4X1 [Homo sapiens]. 2523e-67O
Contig/Assembly ProteinCYP4Z1cytochrome P450 4Z1 [Homo sapiens]. 2523e-67O
Contig/Assembly ProteinCYP4F11cytochrome P450 4F11 [Homo sapiens]. 2111e-54O
Contig/Assembly ProteinCYP4F11cytochrome P450 4F11 [Homo sapiens]. 2111e-54O
Contig/Assembly ProteinCYP4F3leukotriene-B(4) omega-hydroxylase 2 isoform a [Homo sapiens]. 1971e-50O
Contig/Assembly ProteinCYP4F2leukotriene-B(4) omega-hydroxylase 1 [Homo sapiens]. 1941e-49O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCyp4a10cytochrome P450 4A10 [Mus musculus]. 386e-107O
Contig/Assembly ProteinCyp4a32cytochrome P450, family 4, subfamily a, polypeptide 32 [Mus musculus]. 385e-107O
Contig/Assembly ProteinCyp4a12bcytochrome P450, family 4, subfamily a family [Mus musculus]. 380e-106O
Contig/Assembly ProteinCyp4a31cytochrome P450, family 4, subfamily a, polypeptide 31 [Mus musculus]. 379e-105O
Contig/Assembly ProteinCyp4a12acytochrome P450 4A12A [Mus musculus]. 379e-105O
Contig/Assembly ProteinCyp4a29-pscytochrome P450, family 4, subfamily a, polypeptide 29 [Mus musculus]. 367e-101O
Contig/Assembly ProteinCyp4a14cytochrome P450 4A14 precursor [Mus musculus]. 363e-100O
Contig/Assembly ProteinCyp4a30b-pscytochrome P450, family 4, subfamily a, polypeptide 30b, pseudogene [Mus musculus]. 3571e-98O
Contig/Assembly ProteinCyp4b1cytochrome P450 4B1 [Mus musculus]. 2701e-72O
Contig/Assembly ProteinCyp4x1cytochrome P450, family 4, subfamily x, polypeptide 1 [Mus musculus]. 2501e-66O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP4A38cytochrome P450 4A38 [Canis lupus familiaris]. 409e-114O
Contig/Assembly ProteinCYP4A11cytochrome P450, family 4, subfamily A, polypeptide 11 [Canis lupus familiaris]. 407e-114O
Contig/Assembly ProteinCYP4A37cytochrome P450 4A37 [Canis lupus familiaris]. 402e-112O
Contig/Assembly ProteinLOC608452PREDICTED: similar to cytochrome P450, family 4, subfamily B, polypeptide 1 isoform 2 [Canis familiaris]. 2649e-71O
Contig/Assembly ProteinCYP4X1cytochrome P450 4X1 [Canis lupus familiaris]. 2462e-65O
Contig/Assembly ProteinLOC608452PREDICTED: similar to cytochrome P450, family 4, subfamily B, polypeptide 1 isoform 3 [Canis familiaris]. 2385e-63O
Contig/Assembly ProteinLOC484866PREDICTED: similar to Cytochrome P450 4F3 (CYPIVF3) (Leukotriene-B(4) omega-hydroxylase) (Leukotriene-B(4) 20-monooxygenase) (Cytochrome P450-LTB-omega) [Canis familiaris]. 2019e-52O
Contig/Assembly ProteinLOC484867PREDICTED: similar to Cytochrome P450 4F6 (CYPIVF6) [Canis familiaris]. 1826e-46
Contig/Assembly ProteinLOC484868PREDICTED: similar to cytochrome P450, family 2, subfamily E, polypeptide 2 homolog [Canis familiaris]. 1788e-45
Contig/Assembly ProteinLOC610362PREDICTED: similar to cytochrome P450, family 4, subfamily A, polypeptide 11 [Canis familiaris]. 1363e-32O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP4A11cytochrome P450, family 4, subfamily A, polypeptide 11 [Bos taurus]. 449e-126O
Contig/Assembly ProteinCYP4A22cytochrome P450, family 4, subfamily A, polypeptide 22 [Bos taurus]. 442e-124O
Contig/Assembly ProteinCYP4B1cytochrome P450 4B1 [Bos taurus]. 2632e-70O
Contig/Assembly ProteinLOC509506PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like [Bos taurus]. 1993e-51O
Contig/Assembly ProteinLOC509506PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like [Bos taurus]. 1993e-51O
Contig/Assembly ProteinCYP4F3leukotriene-B(4) omega-hydroxylase 2 [Bos taurus]. 1932e-49O
Contig/Assembly ProteinLOC100295883PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like [Bos taurus]. 1932e-49O
Contig/Assembly ProteinLOC100295883PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like [Bos taurus]. 1932e-49O
Contig/Assembly ProteinCYP4F2cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus]. 1924e-49O
Contig/Assembly ProteinCYP4F2cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus]. 1841e-46O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP4A24cytochrome P450 4A24 [Sus scrofa]. 576e-165O
Contig/Assembly ProteinLOC100627844PREDICTED: cytochrome P450 4A24-like [Sus scrofa]. 558e-159O
Contig/Assembly ProteinLOC100526057PREDICTED: cytochrome P450 4A24-like [Sus scrofa]. 556e-159O
Contig/Assembly ProteinCYP4A21taurochenodeoxycholic 6 alpha-hydroxylase [Sus scrofa]. 522e-148O
Contig/Assembly ProteinLOC100523742PREDICTED: cytochrome P450 4A24-like isoform 2 [Sus scrofa]. 518e-147O
Contig/Assembly ProteinLOC100523742PREDICTED: cytochrome P450 4A24-like isoform 1 [Sus scrofa]. 508e-144O
Contig/Assembly ProteinLOC100522145PREDICTED: cytochrome P450 4A11-like [Sus scrofa]. 437e-123O
Contig/Assembly ProteinLOC100523909PREDICTED: cytochrome P450 4B1-like [Sus scrofa]. 2676e-72O
Contig/Assembly ProteinLOC100627093PREDICTED: cytochrome P450 4X1-like [Sus scrofa]. 2314e-61O
Contig/Assembly ProteinLOC100621142PREDICTED: cytochrome P450 4A24-like [Sus scrofa]. 2101e-54O


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
KDN010008C09KDN01_0008_C09.bFS671783 
LVR010086B08LVR01_0086_B08.bCJ000275 
LVRM10026F02LVRM1_0026_F02.bBP139856 AK232787
LVRM10107D06LVRM1_0107_D06.bBP450912 AK394231
LVRM10174E04LVRM1_0174_E04.bCJ004979 

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
106A030.600B-
G200.400
138A200.400BNCAC/H
G030.600CGC/R
142A200.400BSAGA/R
G030.600AGG/R


Alignment:      TOP

20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0107_D06.b : cagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0174_E04.b : ggggagttgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0026_F02.b : agttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0086_B08.b : caxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0008_C09.b : nnccc
20110601C-007964 : ....................AGTCAGGGACAGTCAGCCATCCAGAAGCCCGTGCACCATG
---------+---------+---------+---------+---------+---------+ 40
LVRM1_0107_D06.b : xxxxxxxxxxxxxxxxxxxcAGTCAGGGACAGTCAGCCATCCAGAAGCCCGTGCACCATG
LVRM1_0174_E04.b : xxxxxxxxxxxxxxxxxxxxxGTCAGGGACAGTCAGCCATCCAGAAGCCCGTGCACCATG
LVRM1_0026_F02.b : xxxxxxxxxxxxxxxxxxxxxGTCAGGGACAGTCAGCCATCCAGAAGCCCGTGCACCATG
LVR01_0086_B08.b : xxxxxxxxxxxxxxxxxxggaGTCAGGGACAGTCAGCCATCCAGAAGCCC*TGCACCATG
KDN01_0008_C09.b : ttnnnnnnncctgcgggtgcagggagtcaggacgtcaccatccGAAGCCC*TGCACCATG
20110601C-007964 : ACGGTCCCTGCCCTGGCCAGTGTCTCTGGGCTCCTGCAGGTGGCCTCCCTGCTCGGGCTG
---------+---------+---------+---------+---------+---------+ 100
LVRM1_0107_D06.b : ACGGTCCCTGCCCTGGCCAGTGTCTCTGGGCTCCTGCAGGTGGCCTCCCTGCTCGGGCTG
LVRM1_0174_E04.b : ACGGTCCCTGCCCTGGCCAGTGTCTCTGGGCTCCTGCAGGTGGCCTCCCTGCTCGGGCTG
LVRM1_0026_F02.b : ACGGTCCCTGCCCTGGCCAGTGTCTCTGGGCTCCTGCAGGTGGCCTCCCTGCTCGGGCTG
LVR01_0086_B08.b : ACGGTCCCTGCCCTGGCCAGTGTCTCTGGGCTCCTGCAGGTGGCCTCCCTGCTCGGGCTG
KDN01_0008_C09.b : ACGGTCCCTGCCCTGGCCAGTGTCTCTGGGCTCCTGCAGGTGGCCTCCCTGCTCGGGCTG
20110601C-007964 : CTGCTACTTCTCCTCAAGGCAGCACAGCTCTACCTGCGCAGGCAGTGGCTGCTCAAAGCC
---------+---------+---------+---------+---------+---------+ 160
LVRM1_0107_D06.b : CTGCTACTTCTCCTCAAGGCAGCACAGCTCTACCTGCGCAGGCAGTGGCTGCTCAAAGCC
LVRM1_0174_E04.b : CTGCTACTTCTCCTCAAGGCAGCACAGCTCTACCTGCGCAGGCAGTGGCTGCTCAAAGCC
LVRM1_0026_F02.b : CTGCTACTTCTCCTCAAGGCAGCACAGCTCTACCTGCGCAGGCAGTGGCTGCTCAAAGCC
LVR01_0086_B08.b : CTGCTGCTTCTCCTCAAGGCAGCACAGCTCTACCTGCACAGACAGTGGCTGCTCAAAGCC
KDN01_0008_C09.b : CTGCTGCTTCTCCTCAAGGCAGCACAGCTCTACCTGCACAGACAGTGGCTGCTCAAAGCC
20110601C-007964 : CTCCAGCAGTTCCCGTCCCCTCCTTCCCACTGGCTCTATGGACACAGCAGGGAGTTTCAA
---------+---------+---------+---------+---------+---------+ 220
LVRM1_0107_D06.b : CTCCAGCAGTTCCCGTCCCCTCCTTCCCACTGGCTCTATGGACACAGCAGGGAGTTTCAA
LVRM1_0174_E04.b : CTCCAGCAGTTCCCGTCCCCTCCTTCCCACTGGCTCTATGGACACAGCAGGGAGTTTCAA
LVRM1_0026_F02.b : CTCCAGCAGTTCCCGTCCCCTCCTTCCCACTGGCTCTATGGACACAGCAGGGAGTTTCAA
LVR01_0086_B08.b : CTCCAGCAGTTCCCGTCCCCTCCTTCCCACTGGCTCTATGGACACAGCAGGGAGTTTCAA
KDN01_0008_C09.b : CTCCAGCAGTTCCCGGCCCCTCCTTCCCACTGGCTCTATGGACACAGCAGGGAGTTTCAA
20110601C-007964 : GAGGAAAGCGAGCTGCAACCCCTCCTGAAAAGGGTAGAGAAATACCCAAGTGCCTGTGCT
---------+---------+---------+---------+---------+---------+ 280
LVRM1_0107_D06.b : GAGGAAAGCGAGCTGCAACCCCTCCTGAAAAGGGTAGAGAAATACCCAAGTGCCTGTGCT
LVRM1_0174_E04.b : GAGGAAAGCGAGCTGCAACCCCTCCTGAAAAGGGTAGAGAAATACCCAAGTGCCTGTGCT
LVRM1_0026_F02.b : GAGGAAAGCGAGCTGCAACCCCTCCTGAAAAGGGTAGAGAAATACCCAAGTGCCTGTGCT
LVR01_0086_B08.b : GAGGAAAGCGAGCTGCAACCCCTCCTGAAAAGGGTAGAGAAATACCCAAGTGCCTGTGCT
KDN01_0008_C09.b : GAGGAAAGCGAGCTGCCACCCCTCCTGAAAAGGGTAGAGAAATACCCAAGTACCTGTGCT
20110601C-007964 : CGCTGGCTGTGGGGAACAAGAGCCATGGTACTGGTCTATGACCCTGACTACATGAAGGTG
---------+---------+---------+---------+---------+---------+ 340
LVRM1_0107_D06.b : CGCTGGCTGTGGGGAACAAGAGCCATGGTACTGGTCTATGACCCTGACTACATGAAGGTG
LVRM1_0174_E04.b : CGCTGGCTGTGGGGAACAAGAGCCATGGTACTGGTCTATGACCCTGACTACATGAAGGTG
LVRM1_0026_F02.b : CGCTGGCTGTGGGGAACAAGAGCCATGGTACTGGTCTATGACCCTGACTACATGAAGGTG
LVR01_0086_B08.b : CGCTGGCTGTGGGGAACAAGAGCCATGGTACTGGTCTATGACCCTGACTACATGAAGGTG
KDN01_0008_C09.b : CGCTGGCTGTGGGGAACAAGAGCCATGGTACTGGTCTATGACCCTGACTACATGAAGGTG
20110601C-007964 : GTCCTGGCGAGATCAGACCCCAAGACTTCTGTTGTCTACAGATTGCTGATCCCCTGGATT
---------+---------+---------+---------+---------+---------+ 400
LVRM1_0107_D06.b : GTCCTGGCGAGATCAGACCCCAAGACTTCTGTTGTCTACAGATTGCTGATCCCCTGGATT
LVRM1_0174_E04.b : GTCCTGGCGAGATCAGACCCCAAGACTTCTGTTGTCTACAGATTGCTGATCCCCTGGATT
LVRM1_0026_F02.b : GTCCTGGCGAGATCAGACCCCAAGACTTCTGTTGTCTACAGATTGCTGATCCCCTGGATT
LVR01_0086_B08.b : GTCCTGGCGAGATCAGACCCCAAGAATTCTGTTGTCTACAGATTGCTGATCCCCTGGATT
KDN01_0008_C09.b : GTCCTGGCGAGATCAGACCCCAAGACTTCTGTTGTCTACAGATTGCTGATCCCCTGGATT
20110601C-007964 : GGCTGTGGTTTGCTCCTGTTGAATGGGCAGACGTGGTTCCAGCGTCGGCGGATGCTGACC
---------+---------+---------+---------+---------+---------+ 460
LVRM1_0107_D06.b : GGCTGTGGTTTGCTCCTGTTGAATGGGCAGACGTGGTTCCAGCGTCGGCGGATGCTGACC
LVRM1_0174_E04.b : GGCTGTGGTTTGCTCCTGTTGAATGGGCAGACGTGGTTCCAGCGTCGGCGGATGCTGACC
LVRM1_0026_F02.b : GGCTGTGGTTTGCTCCTGTTGAATGGGCAGACGTGGTTCCAGCGTCGGCGGATGCTGACC
LVR01_0086_B08.b : GGCTGTGGTTTGCTCCTGTTGAATGGGCAGACGTGGTTCCAGCGTCGGCGGATGCTGACC
KDN01_0008_C09.b : GGCTGTGGTTTGCTCCTGTTGAATGGGCAGACGTGGTTCCAGCGTCGGCGGATGCTGACC
20110601C-007964 : CCAGCCTTCCACTATGACATCCTGAAGCCCTACGTAGGTCTCATGGCCAAGTCTGTCCAA
---------+---------+---------+---------+---------+---------+ 520
LVRM1_0107_D06.b : CCAGCCTTCCACTATGACATCCTGAAGCCCTACGTAGGTCTCATGGCCAAGTCTGTCCAA
LVRM1_0174_E04.b : CCAGCCTTCCACTATGACATCCTGAAGCCCTACGTAGGTCTCATGGCCAAGTGTGCCCAA
LVRM1_0026_F02.b : CCAGCCTTCCACTATGACATCCTGAAGCCCTACGTAGGTCTCATGGCCAAGTCTGTCCAA
LVR01_0086_B08.b : CCAGCCTTCCACTATGACATCCTGAAGCCCTACGTAGGTCTCATGGCCAAGTCTGTCCAA
KDN01_0008_C09.b : CCAGCCTTCCACTATGACATCCTGAAGCCCTACGTAGGTCTCATGGCCAAGTCTGTCCAA
20110601C-007964 : GTGATGCTGGACAAGTGGGAGCAGCTCGTCGCCCAGGACCCACGTCTGGAGATCGTGGGA
---------+---------+---------+---------+---------+---------+ 580
LVRM1_0107_D06.b : GTGATGCTGGACAAATGGGAGCAGCTCGTCGCCCCAGACCCACGTCTGGAGATCGTGGGA
LVRM1_0174_E04.b : GTGATGCTGGACAActggagagcactcgtcgcccaaagaccaggtctggacattatggga
LVRM1_0026_F02.b : GTGATGCTGGACAAGTGGGAGCAGCTCGTCGCCCAGGACCCACGTCTGGAGATCGTGGGA
LVR01_0086_B08.b : GTGATGCTGGACAAGTGGGAGCAGCTCGTCGCCCAGGACCCACGTCTGGAGATCGTGGGA
KDN01_0008_C09.b : GTGATGCTGGACAAGTGGGAGCAGCTCGTCGCCCAGGACCCACGTCTGGAGATCGTGGGA
20110601C-007964 : CCCGTCTCCTTGATGACCCTGGACACCATCATGAAGTGCGCCTTCAGCCACCAGGGCAGC
---------+---------+---------+---------+---------+---------+ 640
LVRM1_0107_D06.b : ACCGTCTCCTTGATGACCCTGGACACCATCATGAAGTGCGCCTTCAGCCACCAGGGCAGC
LVRM1_0174_E04.b : cgcgtattcttaatagagctgcaaaatcactcgtagctgaaactacaaccacaaaggtat
LVRM1_0026_F02.b : CCCGTCTCCTTGATGACCCTGGACACCATCATGAAGTGCGCCTTCAGCCACCAGGGCAGC
LVR01_0086_B08.b : CCCGTCTCCTTGATGACCCTGGACACCATCATGAAGTGCGCCTTCAGCCACCAGGGCAGC
KDN01_0008_C09.b : CCCGTCTCCTTGATGACCCTGGACACCATCATGAAGTGCGCCTTCAGCCACCAGGGCAGC
20110601C-007964 : GTCCAGACAGACGGGGATTCCCACTCCTACATCCAGGCCATTTGGGATCTCAAAAATCTC
---------+---------+---------+---------+---------+---------+ 700
LVRM1_0107_D06.b : GTCCAGACAGATGGGGATTCCCACTCCTACATCCAGGCCATTTGGGATCTCAAAAATCTC
LVRM1_0174_E04.b : cagcgggaaaagacgaagattccagtgctattaccgggccatgtgggataacaagaatac
LVRM1_0026_F02.b : GTCCAGACAGATGGGGATTCCCACTCCTACATCCAGGCCATTTGGGATCTC*AAAATCTC
LVR01_0086_B08.b : GTCCAGACAGACGGGGATTCCCACTCCTACATCCAGGCCATTTGGGATCTCAAAAATCTC
KDN01_0008_C09.b : GTCCAGACAGACGGGGATTCCCACTCCTACATCCAGGCCATTTGGGATCTCAAAAATCTC
20110601C-007964 : TTTTCTACCCGTACGAAGAGTGCCTTTCTCCAGAATGACATCATCTACAGGCTGAGCCCT
---------+---------+---------+---------+---------+---------+ 760
LVRM1_0107_D06.b : TTTTCTACCCGTTCGAAGAGTGCCTTTCTCCAGAAAGACATCATCTACAGGCTGgagc
LVRM1_0174_E04.b : gtccagcggcataacacagcaactgacaacaagta
LVRM1_0026_F02.b : TTTTCTACTCGTTCGAAGAGTGCCTTTCTC
LVR01_0086_B08.b : TTTTCTACCCGTACGAAGAGTGCCTTTCTCCAGAATGACATCATCTACAGGCTGAGCCCT
KDN01_0008_C09.b : TTTTCTACCCGTACGAAGAGTGCCTTTCTCCAGAATGACATCATCTACAGGCTGAGCCCT
20110601C-007964 : GAAAGCCATAAGAACCACCGTGCCGCCAGGATAGCCCATCAACACACAGACCGAGTGATC
---------+---------+---------+---------+---------+---------+ 820
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : GAAAGCCGTAAGAACCACCGTGCCGCCAGGATAGCCCATCAACACACAGACCGAGTGATC
KDN01_0008_C09.b : GAAGGCCATAAGAACCACCGTGCCGCCAGGATAGCCCATCAACACACAGACCGAGTGATC
20110601C-007964 : CAGCTGCGGAAGGCGCAGCTGCAAAAGCAGGGAAAAATGGAGAACGTGAGGAAGAAGAGG
---------+---------+---------+---------+---------+---------+ 880
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : CAGCTGCGGAAGGCGCAGCTGCCAAAACAGGGAAAAATGGAGAACGTGAGGAAGAGGAGG
KDN01_0008_C09.b : CAGCTGCGGAAGGCGCAGCTGCAAAAGCAGGGAGAGATGGAGAACGTGAGGAAGAAGAGG
20110601C-007964 : CACTTGGATTTCCTGAACATCCTCCTCCTTGCCCAAATGGAGAAGGGGAACAGCTTGTCG
---------+---------+---------+---------+---------+---------+ 940
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : CACTTGGAATTCCTGAACATCCTCCTCCTTGCCCAAATGGAaaaaggggaaacaacttgt
KDN01_0008_C09.b : CACTTGNATTTCCTGNACATCCTCCTCCTTGCCCNAATGGAGAAGGGGAACAGCTTGTCG
20110601C-007964 : GACACCGACCTCCCGTGCGAAGTGGACACGTTCATGTTCGAGGNTCATGNACACACAGCC
---------+---------+---------+---------+---------+---------+ 1000
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : ccgaacaccgaacccccgttgccaaatgggaaaactttactgtttcaaagggttaagaaa
KDN01_0008_C09.b : GACACCGACCTCCCGTGCGAAGTGGACACGTTCATGTTCGAGGNTCATGNACACACAGCC
20110601C-007964 : AGTGGCAT....................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : cccccaaccccagggggcaatcccccgggaaatcctctaaggccctctgggcccccccac
KDN01_0008_C09.b : AGTGGCATctcctggaatctctatgctctggnctccccacctgagcatcancagaagatg
20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : cccctgaaaacattcaaccaaaaaaacttttcggggaaggaaaaaatcccaagggccctc
KDN01_0008_C09.b : tcgggagagatccaggcctcntgggggaacgcactccatcacctggaacacctggacaaa
20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : cccccgggggggagaaagggccccccccccccccttcccccccctgggggaaaaaccccc
KDN01_0008_C09.b : ggcctaaccaccatgggataaggaggcctgaaactttccccctccaggagtagcaaagct
20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b : cccttgggtaaaaaacccaaaaaaaaatgtcccccccccctcaaaccct
KDN01_0008_C09.b : cccagccctcccttcctgatgaatcttaccgcgggacatctttgtctcattaagctcacc
20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b :
KDN01_0008_C09.b : aacccaaggtgggaaccagatttaacaccggttacgggtctcaacaccgcttccctttca
20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b :
KDN01_0008_C09.b : aaacaaaatttaaatttcaaaaaaaaggggggggcgccttttggctccccacacccccat
20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b :
KDN01_0008_C09.b : gtgaaaaaaaaaatccccnnggaaaaaaaaaggggggnnnnnnnnnnnctcgnacgacac
20110601C-007964 : ............................................................
---------+---------+---------+---------+---------+---------+ 1008
LVRM1_0107_D06.b :
LVRM1_0174_E04.b :
LVRM1_0026_F02.b :
LVR01_0086_B08.b :
KDN01_0008_C09.b : tttcnntttcacacacaccttctacagctacgnnnnnnnnnnnnnnnnnnnnnnt