Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-008434

Sequence: [FASTA format sequence] GATGTCACCG GAAGACGAAG TAGGGAAGGC GCCAACCCGG GAGGGGCCCG ATCGAGTTGG GACAGAACGA GGAGGAGGCG CAGGCAGGAG GCATGGCCGG ATGTCGCGGC CCGTAGCCCT AAGCGCGGCG GGGGCGGCCG CGGCGGGGGC GGTGCTAGTG GCCGCCCTGC TCCTGTTGCG GCCTGAGGAC GAAGGGCTGG GGGCCGGGTC CAGCATGGCC GAGACAGAAG CGCTGCCGAA GCTTCGGGAA GACTTCAGGA TGCAGAATAA ATCCGTCTTT ATTCTGGGCG CCAGCGGGGA AACCGGCCGA GTGCTGCTGA AGGAAATCCT GGAACAGAGC CTATTTTCCA AAGTCACGCT CATTGGCCGG AGGAAGCTCA CATTCGACGA GGAAGCTTAT AAAAACGTGA ATCAAGAAGT GGTGGACTTT GAAAAGTTGG ATGACTACGC TTCTGCCTTT CAAGGTCATG AGGTTGGATT CTGTTGCCTG GGTACTACCA GAAGAAAAGC TGGGGCGGAG GGATTTGTTC GTGTTGATCG AGATTACATC CTCAAGTCTG CAGAGCTGGC CAAAGCTGGA GGGTGCAAAC ATTTCAACTT GCTGTCCGCT AAGGGAGCTG ATAAGTCAAG CAACTTTTTA TATCTGCAAG TCAAGGGAGA AGTGGAAGCT AGAATTGAAG AATTAAAATT TGATCGTTAC TCCATATTTA GGCCAGGAGT TCTGTTATGT GATAGGCAAG AATCTCGCCC AGGTGAATGG TTGGTTAGGA AGTTCTTTGG CTCCTTACCA GAATCTTGGG CCAGCGGACA CTCTGTGCCA GTGCTGACTT TGGTTAGAGC GATGCTGAAC AACACAGTGA GACCAAGCGA CCAGAAGAAG GAACTGCTGG AAAACAAGGC CATCCTTGAC CTGGGAAAAG CTGATGGCTC TCTCAAGACA TAACCATGCT GGAGAAATGC TTTTTATTGT AAAATTCACA CTTTGTACCT CATCGGTAAT TTCAGGGTCT AAAAAAGTTA GCACGCCTTA ACTGTAGTTT TACTATTCCT AGCCCCCCAG ATCCAATCAA AAAATGATCG CGCTCTGCAT CAGCATTTTA GAGGCTAGTT GTACATATGT AAACTTCACC CAGGGAT

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
HTATIP2 oxidoreductase HTATIP2 isoform a [Homo sapiens]. 461 e-130 O

HTATIP2 oxidoreductase HTATIP2 isoform b [Homo sapiens]. 447 e-126 O

HTATIP2 oxidoreductase HTATIP2 isoform b [Homo sapiens]. 447 e-126 O

HTATIP2 oxidoreductase HTATIP2 isoform b [Homo sapiens]. 447 e-126 O

HTATIP2 oxidoreductase HTATIP2 isoform c [Homo sapiens]. 192 4e-49 O

Locus	Definition	Score	E value	FL
HTATIP2	oxidoreductase HTATIP2 isoform a [Homo sapiens].	461	e-130	O
HTATIP2	oxidoreductase HTATIP2 isoform b [Homo sapiens].	447	e-126	O
HTATIP2	oxidoreductase HTATIP2 isoform b [Homo sapiens].	447	e-126	O
HTATIP2	oxidoreductase HTATIP2 isoform b [Homo sapiens].	447	e-126	O
HTATIP2	oxidoreductase HTATIP2 isoform c [Homo sapiens].	192	4e-49	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Htatip2 oxidoreductase HTATIP2 isoform a [Mus musculus]. 425 e-119 O

Htatip2 oxidoreductase HTATIP2 isoform b [Mus musculus]. 414 e-116 O

Htatip2 oxidoreductase HTATIP2 isoform b [Mus musculus]. 414 e-116 O

Htatip2 oxidoreductase HTATIP2 isoform b [Mus musculus]. 414 e-116 O

Htatip2 oxidoreductase HTATIP2 isoform b [Mus musculus]. 414 e-116 O

Locus	Definition	Score	E value	FL
Htatip2	oxidoreductase HTATIP2 isoform a [Mus musculus].	425	e-119	O
Htatip2	oxidoreductase HTATIP2 isoform b [Mus musculus].	414	e-116	O
Htatip2	oxidoreductase HTATIP2 isoform b [Mus musculus].	414	e-116	O
Htatip2	oxidoreductase HTATIP2 isoform b [Mus musculus].	414	e-116	O
Htatip2	oxidoreductase HTATIP2 isoform b [Mus musculus].	414	e-116	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC476886 PREDICTED: similar to HIV-1 Tat interactive protein 2, 30kDa [Canis familiaris]. 441 e-124 O

		Locus	Definition	Score	E value	FL
		LOC476886	PREDICTED: similar to HIV-1 Tat interactive protein 2, 30kDa [Canis familiaris].	441	e-124	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
HTATIP2 oxidoreductase HTATIP2 [Bos taurus]. 456 e-128 O

		Locus	Definition	Score	E value	FL
		HTATIP2	oxidoreductase HTATIP2 [Bos taurus].	456	e-128	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100521603 PREDICTED: oxidoreductase HTATIP2-like [Sus scrofa]. 283 2e-76 O

LOC100626454 PREDICTED: hypothetical protein LOC100626454 [Sus scrofa]. 283 2e-76

LOC100521771 PREDICTED: hypothetical protein LOC100521771 [Sus scrofa]. 178 4e-45 O

Locus	Definition	Score	E value	FL
LOC100521603	PREDICTED: oxidoreductase HTATIP2-like [Sus scrofa].	283	2e-76	O
LOC100626454	PREDICTED: hypothetical protein LOC100626454 [Sus scrofa].	283	2e-76
LOC100521771	PREDICTED: hypothetical protein LOC100521771 [Sus scrofa].	178	4e-45	O

Assembly Members: 10 TOP

Library Plate Loc. Read Name Accession Full Seq.

BFLT1 0109 F02 BFLT1_0109_F02.b HX202502 AK400232
CBLT1 0075 D08 CBLT1_0075_D08.b HX217154
CBLT1 0076 A04 CBLT1_0076_A04.b HX217205
CLNT1 0110 B01 CLNT1_0110_B01.b HX219896
ITT01 0032 G12 ITT01_0032_G12.b BW978917
OVRT1 0024 F11 OVRT1_0024_F11.b FS688391
OVRT1 0115 H09 OVRT1_0115_H09.b HX236068
PST01 0088 A08 PST01_0088_A08.b FS703783
TCH01 0008 D11 TCH01_0008_D11.b CJ023041
THY01 0067 B04 THY01_0067_B04.b BP160946

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
192 A 8 0 0.800 W N GAA/E
C 2 0 0.200 GCA/A
436 A 4 0 0.400 W S AAA/K
G 6 0 0.600 AAG/K
548 A 6 0 0.600 W N ATC/I
G 4 0 0.400 GTC/V

Alignment: TOP

20110601C-008434 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
BFLT1_0109_F02.b : nnnccgttagctgacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0110_B01.b :                                                     nnccctct
TCH01_0008_D11.b :                                             cgtnnnccttggacta
CBLT1_0076_A04.b :                                                             
CBLT1_0075_D08.b :                                                             
THY01_0067_B04.b :                                                    txxxxxxxx
OVRT1_0115_H09.b :                                                             
OVRT1_0024_F11.b :                                                             
PST01_0088_A08.b :                                                             
ITT01_0032_G12.b :                                                             


20110601C-008434 : ............GATGTCACCGGAAGACGAAGTAGGGAAGGCGCCAACCCGGGAGGGGCC
                   ---------+---------+---------+---------+---------+---------+ 48
BFLT1_0109_F02.b : xxxxxxxxxttcGATGTCACCGGAAGACGAAGTAGGGAAGGCGCCAACCCGGGAGGGGCC
CLNT1_0110_B01.b : actgcgnacgagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0008_D11.b : tgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0076_A04.b :            tttttagcaggtacacgccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0075_D08.b :             tttttccaggtagaggccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0067_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0115_H09.b :   nnnnccgtctgcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0024_F11.b :   nnnnnccgttagctgtcngxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PST01_0088_A08.b :                                                          nnn
ITT01_0032_G12.b :                                                             


20110601C-008434 : CGATCGAGTTGGGACAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
                   ---------+---------+---------+---------+---------+---------+ 108
BFLT1_0109_F02.b : CGATCGAGTTGGGACAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
CLNT1_0110_B01.b : xxxcgGAGTTGGGACAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
TCH01_0008_D11.b : xxxxxGAGTTGGGACAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
CBLT1_0076_A04.b : xxxxxxxxxxxxGACAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
CBLT1_0075_D08.b : xxxxxxxxxxxxGACAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
THY01_0067_B04.b : xxxxxxxxxxxxxxCAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
OVRT1_0115_H09.b : xxxxxxxxxxxxxxCAGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
OVRT1_0024_F11.b : xxxxxxxxxxxxxxxxGAACGAGGAGGAGGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
PST01_0088_A08.b : ntctgcggtggcttggacgacgaggaggaGCGCAGGCAGGAGGCATGGCCGGATGTCGCG
ITT01_0032_G12.b :                                                   nnnggatgaa


20110601C-008434 : GCCCGTAGCCCTAAGCGCGGCGGGGGCGGCCGCGGCGGGGGCGGTGCTAGTGGCCGCCCT
                   ---------+---------+---------+---------+---------+---------+ 168
BFLT1_0109_F02.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
CLNT1_0110_B01.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
TCH01_0008_D11.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
CBLT1_0076_A04.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
CBLT1_0075_D08.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
THY01_0067_B04.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
OVRT1_0115_H09.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
OVRT1_0024_F11.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
PST01_0088_A08.b : GCCCGTAGCCCTAAgcgcggcgggggcggccgcggcgggggcggTGCTAGTGGCCGCCCT
ITT01_0032_G12.b : cxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCTAGTGGCCGCCCT


20110601C-008434 : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
                   ---------+---------+---------+---------+---------+---------+ 228
BFLT1_0109_F02.b : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
CLNT1_0110_B01.b : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
TCH01_0008_D11.b : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
CBLT1_0076_A04.b : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
CBLT1_0075_D08.b : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
THY01_0067_B04.b : GCTCCTGTTGCGACCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
OVRT1_0115_H09.b : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
OVRT1_0024_F11.b : GCTCCTGTTGCGGCCTGAGGACGAAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
PST01_0088_A08.b : GCTCCTGTTGCGGCCTGAGGACGCAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA
ITT01_0032_G12.b : GCTCCTGTTGCGGCCTGAGGACGCAGGGCTGGGGGCCGGGTCCAGCATGGCCGAGACAGA


20110601C-008434 : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
                   ---------+---------+---------+---------+---------+---------+ 288
BFLT1_0109_F02.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
CLNT1_0110_B01.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
TCH01_0008_D11.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
CBLT1_0076_A04.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
CBLT1_0075_D08.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
THY01_0067_B04.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
OVRT1_0115_H09.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
OVRT1_0024_F11.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
PST01_0088_A08.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG
ITT01_0032_G12.b : AGCGCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGG


20110601C-008434 : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
                   ---------+---------+---------+---------+---------+---------+ 348
BFLT1_0109_F02.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
CLNT1_0110_B01.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
TCH01_0008_D11.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
CBLT1_0076_A04.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
CBLT1_0075_D08.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
THY01_0067_B04.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
OVRT1_0115_H09.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
OVRT1_0024_F11.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
PST01_0088_A08.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC
ITT01_0032_G12.b : CGCCAGCGGGGAAACCGGCCGAGTGCTGCTGAAGGAAATCCTGGAACAGAGCCTATTTTC


20110601C-008434 : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
                   ---------+---------+---------+---------+---------+---------+ 408
BFLT1_0109_F02.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
CLNT1_0110_B01.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
TCH01_0008_D11.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
CBLT1_0076_A04.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
CBLT1_0075_D08.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
THY01_0067_B04.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
OVRT1_0115_H09.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
OVRT1_0024_F11.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
PST01_0088_A08.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT
ITT01_0032_G12.b : CAAAGTCACGCTCATTGGCCGGAGGAAGCTCACATTCGACGAGGAAGCTTATAAAAACGT


20110601C-008434 : GAATCAAGAAGTGGTGGACTTTGAAAAGTTGGATGACTACGCTTCTGCCTTTCAAGGTCA
                   ---------+---------+---------+---------+---------+---------+ 468
BFLT1_0109_F02.b : GAACCAAGAAGTGGTGGACTTTGAAAAGTTGGATGACTACGCTTCTGCCTTTCAAGGTCA
CLNT1_0110_B01.b : GAATCAAGAAGTGGTGGACTTTGAAAAGTTGGATGACTACGCTTCTGCCTTTCAAGGTCA
TCH01_0008_D11.b : GAATCAAGAAGTGGTGGACTTTGAAAAATTGGATGACTACGCTTCTGCCTTTCAAGGTCA
CBLT1_0076_A04.b : GAATCAAGAAGTGGTGGACTTTGAAAAGTTGGATGACTACGCTTCTGCCTTTCAAGGTCA
CBLT1_0075_D08.b : GAATCAAGAAGTGGTGGACTTTGAAAAGTTGGATGACTACGCTTCTGCCTTTCAAGGTCA
THY01_0067_B04.b : GAATCAAGAAGTGGTGGACTTTGAAAAATTGGATGACTACGCTTCTGCCTTTCAAGGTCA
OVRT1_0115_H09.b : GAATCAAGAAGTGGTGGACTTTGAAAAGTTGGATGACTACGCTTCTGCCTTTCAAGGTCA
OVRT1_0024_F11.b : GAATCAAGAAGTGGTGGACTTTGAAAAGTTGGATGACTACGCTTCTGCCTTTCAAGGTCA
PST01_0088_A08.b : GAATCAAGAAGTGGTGGACTTTGAAAAATTGGATGACTACGCTTCTGCCTTTCAAGGTCA
ITT01_0032_G12.b : GAATCAAGAAGTGGTGGACTTTGAAAAATTGGATGACTACGCTTCTGCCTTTCAAGGTCA


20110601C-008434 : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
                   ---------+---------+---------+---------+---------+---------+ 528
BFLT1_0109_F02.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
CLNT1_0110_B01.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
TCH01_0008_D11.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
CBLT1_0076_A04.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
CBLT1_0075_D08.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
THY01_0067_B04.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
OVRT1_0115_H09.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
OVRT1_0024_F11.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAGAGCTGGGGCGGAGGGATTTGT
PST01_0088_A08.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT
ITT01_0032_G12.b : TGAGGTTGGATTCTGTTGCCTGGGTACTACCAGAAGAAAAGCTGGGGCGGAGGGATTTGT


20110601C-008434 : TCGTGTTGATCGAGATTACATCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
                   ---------+---------+---------+---------+---------+---------+ 588
BFLT1_0109_F02.b : TCGTGTTGATCGAGATTACATCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
CLNT1_0110_B01.b : TCGTGTTGATCGAGATTACATCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
TCH01_0008_D11.b : TCGTGTTGATCGAGATTACGTCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
CBLT1_0076_A04.b : TCGTGTTGATCGAGATTACATCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
CBLT1_0075_D08.b : TCGTGTTGATCGAGATTACATCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
THY01_0067_B04.b : TCGTGTTGATCGAGATTACGTCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
OVRT1_0115_H09.b : TCGTGTTGATCGAGATTACATCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
OVRT1_0024_F11.b : TCGTGTTGATCGAGATTACATCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA
PST01_0088_A08.b : TCGTGTTGATCGAGATTACGTCCTCAAGTCTGCAGAGCTGGCCAAGGCTGGAGGGTGCAA
ITT01_0032_G12.b : TCGTGTTGATCGAGATTACGTCCTCAAGTCTGCAGAGCTGGCCAAAGCTGGAGGGTGCAA


20110601C-008434 : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
                   ---------+---------+---------+---------+---------+---------+ 648
BFLT1_0109_F02.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
CLNT1_0110_B01.b : ACATTTCAACTTGCTGTCCGCTAACGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
TCH01_0008_D11.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
CBLT1_0076_A04.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
CBLT1_0075_D08.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
THY01_0067_B04.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
OVRT1_0115_H09.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
OVRT1_0024_F11.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
PST01_0088_A08.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA
ITT01_0032_G12.b : ACATTTCAACTTGCTGTCCGCTAAGGGAGCTGATAAGTCAAGCAACTTTTTATATCTGCA


20110601C-008434 : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
                   ---------+---------+---------+---------+---------+---------+ 708
BFLT1_0109_F02.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTTAAATTTGATCGTTACTCCATATT
CLNT1_0110_B01.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
TCH01_0008_D11.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
CBLT1_0076_A04.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
CBLT1_0075_D08.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
THY01_0067_B04.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
OVRT1_0115_H09.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
OVRT1_0024_F11.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
PST01_0088_A08.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT
ITT01_0032_G12.b : AGTCAAGGGAGAAGTGGAAGCTAGAATTGAAGAATTAAAATTTGATCGTTACTCCATATT


20110601C-008434 : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
                   ---------+---------+---------+---------+---------+---------+ 767
BFLT1_0109_F02.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
CLNT1_0110_B01.b : TAAGCCAGGAGTTCTGTTTATGTGATATGCAAGAATCTCGCCCT*GTGAATGGGTTGGTA
TCH01_0008_D11.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
CBLT1_0076_A04.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
CBLT1_0075_D08.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
THY01_0067_B04.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
OVRT1_0115_H09.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
OVRT1_0024_F11.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
PST01_0088_A08.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA
ITT01_0032_G12.b : TAGGCCAGGAGTTCTGTT*ATGTGATAGGCAAGAATCTCGCCCAGGTGAATGGTTGGTTA


20110601C-008434 : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA
                   ---------+---------+---------+---------+---------+---------+ 827
BFLT1_0109_F02.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA
CLNT1_0110_B01.b : AGAAGTTCTTTGGCT*CTTACAAGAATCTT*GGCCCGCGGAACATCCGTGCCAGTGCTGA
TCH01_0008_D11.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGGCAGCGGACACTCTGTGCCAGTGCTGA
CBLT1_0076_A04.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA
CBLT1_0075_D08.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA
THY01_0067_B04.b : GGAAGTTCTTTGGCTCCTTTACAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTG   
OVRT1_0115_H09.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA
OVRT1_0024_F11.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA
PST01_0088_A08.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA
ITT01_0032_G12.b : GGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGCGGACACTCTGTGCCAGTGCTGA


20110601C-008434 : CTTTGGTTAGAGCGATGCTGAACAACACAGTGAGACCAAGCGACCAGAAGAAGGAACTGC
                   ---------+---------+---------+---------+---------+---------+ 887
BFLT1_0109_F02.b : CTTTGG*TAGAGCGATGCTGAACAACACAGTGAGACCAAGCGAACCGAAGAAGGGACTGC
CLNT1_0110_B01.b : CTTTGGTTAGAGCTATGCTGAACAACACgttgaataccagcctccataaaaagatcttgc
TCH01_0008_D11.b : CTTTGGTTAGAGCGATGCTGAACAACACAGTGAGACCAAGCGACCAGAAGAAGGAACTGC
CBLT1_0076_A04.b : CTTTGGTTAGAGCGATGCTGAACAACACAGTGAGACCAAGCGACCAGAAGAAGGAACTGC
CBLT1_0075_D08.b : CTTTGGTTAGAGCGATGCTGAACAACACAGTGAGACCAAGCGACCAGAAGAAAGAACTGC
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : CTTTGGTTAGAGCGATGCTGAACNACACAGTGAGACCAAGCGACCAGAAGAAG*AACTGC
OVRT1_0024_F11.b : CTTTGGTTAGAGCGATGCTGAAACACACAGTGAGACCAAGCGACCAGAAGAAGGAACTGC
PST01_0088_A08.b : CTTTGGTTAGAGCGATGCTGAACAACACAGTGAGACCAAGCGACCAGAAGAAGGAACTGC
ITT01_0032_G12.b : CTTTGGTTAGAGCGATGCTGAACAACACAGTGAGACCAAGCGACCAGAAGAAGGAACTGC


20110601C-008434 : TGGAAAACAAGGCCATCCTTGACCTGGGAAAAGCTGATGGCTCTCTCAAGACATAACCAT
                   ---------+---------+---------+---------+---------+---------+ 947
BFLT1_0109_F02.b : TGGAAAAC*AAGCCATCCTTGACCTGGGAAAAGCTGATGGCTCccccaggacttaaccct
CLNT1_0110_B01.b : tgaaaatcagtacttctttacctggaaaaatctagggctccctcaacataacccttctgg
TCH01_0008_D11.b : TGAAAACC*AGGCCATCCTTGACCTGGGAAAAGCTGATGGCTCTCTCCAGACATTAACCT
CBLT1_0076_A04.b : TGGAAACA*AGGCCATCCTTGACCTGNGAAAAGCTGATGGCTCTCTNCAGACATAACCAT
CBLT1_0075_D08.b : TGGAAAAC*AAGCCATCCTTGACCTGNGAAAAGCTGATGGCTCTCTCAAGACATAACCAT
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : TGGAAACA*AGGCCATCTTTGAC*TGGGAAAAGCTGACGGCTCTCTCAAGACATAACCtg
OVRT1_0024_F11.b : TGGAAAAC*AAGCCATCCCTTGACTGGGAAAAGCTGATGGCTCTCTCAAGACAT*ACCAT
PST01_0088_A08.b : TGGAAAACAAGGCCATCCTTGACCTGNGAAAAGCTGATGGCTCTCTCAAGACATAACCAT
ITT01_0032_G12.b : TGGAAAACAAGGCCATCCTTGACCTGNGAAAAGCTGATGGCTCTCTNCAGACATAACCAT


20110601C-008434 : GCTGGAGAAATGCTTTTTATTGTAAAATTC*ACACTTTGTACCTCATCGGTAATTTCAGG
                   ---------+---------+---------+---------+---------+---------+ 1006
BFLT1_0109_F02.b : gctggaaaatgctttttttggaaaattcacactttgccctcaccggtattttcggttcca
CLNT1_0110_B01.b : aaaaaggtttttatggaaatatttacatttgttacctcctcggtattttagggtcctaaa
TCH01_0008_D11.b : GCTGGAGAAATGCTTTTTATTGTAAAATTTCACACTTTGTACCTCATCGGTAATttcagg
CBLT1_0076_A04.b : GCTGGAGAAATGCTTTTTATTGTAAAATTC*ACACTTTGTACCTCATCGGTAATttcaag
CBLT1_0075_D08.b : GCTGGAGAAATGCTTTTTATTGTAAAAATCAACACTTTGTACCTCATCGGTAATTTCAGG
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : ctggaaaatgcttttattgtaaaatcaacctttgaactcacggtaattcaggtctaaaaa
OVRT1_0024_F11.b : GCTGGAGAAATGCTTTTTATTGTAAAATTC*ACACTTTGTACCTCATCGGTAATttcagg
PST01_0088_A08.b : GCTGGAGAAATGCTTTTTATTGTAAAA*TCAACACTTTGTACCTCATCGGTAATTTCAGG
ITT01_0032_G12.b : GCTGGAGAAATGCTTTTTATTGTAAAATTTCACACTTTGTACCTCATCGGTAATTTCAGG


20110601C-008434 : GTCTAAAAAAGTTAGCACGCCTTAACTGTAGTTTTACTATTCCTAGCCCCCCAGATCCAA
                   ---------+---------+---------+---------+---------+---------+ 1066
BFLT1_0109_F02.b : aaaaattaaccccccttactgggatttactttcttaccccccaatccataaaaaatgttc
CLNT1_0110_B01.b : aatttaccccccttatttttatttttacattttcctccctctattcatatttaatagatt
TCH01_0008_D11.b : gtcttaaaaagttaacacgccttaactggaattttactactctaagcccccccaattcca
CBLT1_0076_A04.b : gtctaaaaagttagcacgcctaactgtatttttactatcttaccccccagatcaatcaaa
CBLT1_0075_D08.b : GTCTAAAAAAGTTAGCACGCCTaactgtagttttactattctagccccccagacccatca
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : attacccgccttaagtagttttctattctaaccccccaatccatcaaaaatgatccccct
OVRT1_0024_F11.b : gtctaaaaaagttagcacgcctaactggattttactattctagccccccaatcaatcaaa
PST01_0088_A08.b : GTCTAAAAAAGTTAGCATGCCTTACCTGTAGTTTTACTATTCTTAGCCCCCC*GATCCAA
ITT01_0032_G12.b : GTCTAAAAAAGTTAGCACGCCTTAACTGTANGTTTACTATTTCTAGCCCCCCAGATCCNA


20110601C-008434 : TCAAAAAATGATCGCGCTCTGCATCAGCATTTTAGAGGCTAGTTGTACATATGTAAACTT
                   ---------+---------+---------+---------+---------+---------+ 1126
BFLT1_0109_F02.b : cccccgcccccccttttagggccttttcatttttaaacccacggggttcctgcaaataaa
CLNT1_0110_B01.b : ccattcactacccttttaagttttcttaattattgaaactaaacgcggtcttgttaaaga
TCH01_0008_D11.b : atcaaaaatgatcgccttctgcatcaccattttaaaggctatttgtactttgtaaacatc
CBLT1_0076_A04.b : aatgatcccctctgatcaccttttaaggcagtggtctatgtaacatccaccaggatcttt
CBLT1_0075_D08.b : aaaatgatcccctctgcatcagctttttaaggcctagtgtcatttttacctcaaccggga
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : gccccccatttgaggcttttgtactattgaaactcaccgggttcttgcaaataaaatccc
OVRT1_0024_F11.b : aatgatcgcctctgcatcgccatttaaaggctagtgactttgtaacttcaacagggatct
PST01_0088_A08.b : TCAAAAAATGATCGCACTCTGCATCAGCATTTTAGAGGCTAGTTGTACATATGTAAACTT
ITT01_0032_G12.b : TCAAAAAATGATCGCGCTCTGCATCAGCATTTTAGAGGCTAGTTGTACATATGTAAACAT


20110601C-008434 : CACCCAGGGAT.................................................
                   ---------+---------+---------+---------+---------+---------+ 1137
BFLT1_0109_F02.b : aatcacagttcccgggggttaaaaaggaagcccttttttcgggggatattaaaaaccgtt
CLNT1_0110_B01.b : ataaaaaaaaaaaaaatgtcctgttcattcctttggcaccctctaaaatataattaaaat
TCH01_0008_D11.b : acccgggatccttgcaaaattaaaatcccccatttcctgggggtctaaaaaggaatgaca
CBLT1_0076_A04.b : caaagtaaaatcagcattgcctgggtcaaaaaagaatgacttgttaaccggggtaatctt
CBLT1_0075_D08.b : tcctgcaaagtaaaatcccacattgccgggggtcttaaaaggaagacctgttttagccgg
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : cctttcctggggctaaaaagaaagcacatttttccgggggaattttaaacctggcttgga
OVRT1_0024_F11.b : tgcaaataaaaatccccattgccgggggcttaaaaaggatgacctgtttaacccgggtga
PST01_0088_A08.b : CAaccaagggatcctgcaaaagtaaaaatccaacaattgcctggtggtctataaaaggga
ITT01_0032_G12.b : CACCCAGGGATccttgccaaaatagagatcagcaattgcctggtggtctataaaaggaat


20110601C-008434 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1137
BFLT1_0109_F02.b : cttgaaaggccccccaaaattttttcctggtggaaaaaaaataagcccccacatttaaaa
CLNT1_0110_B01.b : ccctcctcactcccaactacaatatagattatttttttttaagctaataacttatgatga
TCH01_0008_D11.b : tgttttaccggggttaacctgaaactcttgctaatggggaggcctttccaaggcccacca
CBLT1_0076_A04.b : aaactttgctagggaaaagcccaattaatgttttttcccttccggaaaaaaaaatctaag
CBLT1_0075_D08.b : ggaatcttgaacccggctaatgagaaggcccacaaaaaaattttttttcctggcgggaaa
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : aaggccccacaaaaatttttttcttctggggaaaaaaaaaaagggcccccccattttaac
OVRT1_0024_F11.b : attgaaaccttggtagtggaaagccccaacaaggatttttcccctgcgggaaaaaaaaat
PST01_0088_A08.b : tgacactggttatagccggggtggaccctgaaaacttcatgctaagtgagaaaggccatt
ITT01_0032_G12.b : gacacatgttatagcaggggtgacccttgaaacttcaggctagtgagaaagcccggtccc


20110601C-008434 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1137
BFLT1_0109_F02.b : atattggggggggcaaaatttttttatcctcgtgcccccccgga               
CLNT1_0110_B01.b : tattcttatacacatattcatattattttcttgcaattggaagatttaacttaattctta
TCH01_0008_D11.b : aaagaattttttaattcgcggaaaaaaaaaattaaggcccacccaattttgaaacaattt
CBLT1_0076_A04.b : ccattcaacttctgaaaattttgggtgggcaaaaattttttgttaacctttgggccaacc
CBLT1_0075_D08.b : ataaaaatcagggccacccaattccgaaaaattttggggttggccaaaaactgttttttt
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : acatttgggggtgggaaaaagtttttttttcccccggcccaaccccgggggagaaaaact
OVRT1_0024_F11.b : cagagccccccaattttaaaaaattttggggggggaaaaaccgttttttaaccttcggcc
PST01_0088_A08.b : cccaagggcccaactaaaatgattttatttagccttgcaggaaagtaaaaattccaaggc
ITT01_0032_G12.b : aaaggccccacctagatggatttattaccctggctggaaaaataaaaaatctaggtctat


20110601C-008434 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1137
BFLT1_0109_F02.b :                                                             
CLNT1_0110_B01.b : atgtcctaataattatatacttcttcatcttaatgacatctttatgtgtctcattatatc
TCH01_0008_D11.b : tggt                                                       
CBLT1_0076_A04.b : cccggggagaaaaaatcgtttcaaatcccccaaaaattttttcggtttattcaaccttgg
CBLT1_0075_D08.b : accttaggcccaaaccccggggagagggaaccttttgtaacccaaaat           
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b : ttccccacccccccaattttagtgggttaaaccccggtgttttaaatacaggggtgttgt
OVRT1_0024_F11.b : ccacccccgggggaaagaaact                                     
PST01_0088_A08.b : caattccaactttcggaacaaaatttttggggaagggaacaaaaaccgtgttttgtaatt
ITT01_0032_G12.b : tccaaatttcgaatcaaaattttggggagg                             


20110601C-008434 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1137
BFLT1_0109_F02.b :                                                             
CLNT1_0110_B01.b : attaactagattcatacatatttatttcttgataatattataataactattc       
TCH01_0008_D11.b :                                                             
CBLT1_0076_A04.b : gtt                                                        
CBLT1_0075_D08.b :                                                             
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b :                                                            
OVRT1_0024_F11.b :                                                             
PST01_0088_A08.b : ttgggttgtggcccaaaactgntttttgttaacctcttaaggctcaacgccccgggggag
ITT01_0032_G12.b :                                                             


20110601C-008434 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1137
BFLT1_0109_F02.b :                                                             
CLNT1_0110_B01.b :                                                             
TCH01_0008_D11.b :                                                             
CBLT1_0076_A04.b :                                                             
CBLT1_0075_D08.b :                                                             
THY01_0067_B04.b :                                                             
OVRT1_0115_H09.b :                                                             
OVRT1_0024_F11.b :                                                             
PST01_0088_A08.b : aataaaaaacttgctcacac                                       
ITT01_0032_G12.b :