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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008453

Length: 1,454

Sequence [FASTA format sequence]
CTACAACGAG AGGGACCGAG TAAAATGTCA TAAAATGGAG AAGAAAGCAT TAAAGCAAAG
GCAAATGGAA AGGAAAGGCA ACAGCATGGC CAGCGTGCTG TCCCGGCGCC TTGGCAAGCG
GTCCCTCTTG GGAGCCCGGG TGTTGGGGCC ACTTGGGGCT GTCCCACCCT TGGAGCCGCA
GGCAGAGCTG CTGGAGGGGG CGGCTCCCCA GCCCTTCCTT GCCTCTAAGG ACACGTCCTG
CCAGGAGCAG CCCAAGGAAG TGCTCAAGGC TCCTGACACC GCAGGTCCTC AGCCAGTGGC
CTTTCAGCCT GGGCAGAAGG TTTGTGTGTG GTATGGGGGT CAAGAATGCC CAGGGATGGT
GGAGCAGCAT AGTTGGGCAG AGGATAAGGT GACTGTCTGG CTGTTGGACC AGAAGTTACA
AATCTGCTGC AAAGCGGAGG AGGTGTGGCT GGCTGAGCTG CAGGGCCCCA TCCCCCAGGC
GCCACCTCCA GAGCCTGAAA CCCAGGCACC AGCCTACCGG CCTGTCTCCA GGAACATTGA
CGTCCCAAAG AGGAAGTCGG ATGCCGTGGA AATGGACGAG ATGATGGCGG CCATGGTGCT
GACCTCCCTG TCCTGCAGCC CCGTTGTGCA GAGTCCTCCC GGGGTCGAGG CCAACTTCTC
TGCTTCCCGC GCCGCCTGTG ACCCGTGGAA GGAGAGTGGC GACGTGTCAG ACAGCGGCAG
TAGCACCACC AGCGGGCACT GGAGCGGGAG CAGCGGTGTC TCCACCCCCT CCCCTCCCCA
CCCCCAGGCC AGCCCCAAGT ATTTGGGGGA TGCCTTTGGT TCTCCGCAAA CTGATCATGG
TTTTGAGACT GATCCAGATG CTTTCCTGTT GGATGAACCA GCTCCCCGCA AGAGAAAGAA
CTCGGTGAAG GTGATGTACA AGTGCCTGTG GCCCAACTGC GGCAAAGTCC TGCGCTCCAT
CGTGGGCATC AAGCGACACG TCAAAGCCCT TCACCTGGGG GATACCGTGG ACTCCGACCA
GTTCAAGCGG GAGGAGGATT TCTACTACAC GGAGGTGCAG ATGAAGGAGG AAGCTGCTGC
CTTGGGCGCC CCCGCAGCTG ACCTGGCTCC CACCCCCGGC GTGACCAGCC CACCCCTCGC
CATTCTCCCA CCGCCTCCTC CCAAAGCCCA GCCCTCAGGC CCAGATCACC CTGGCCTGGA
GTCCTACCTG CCCTCTGGTG CTCTCAGCAA GTCAGCTCCT GGCTCCTTCT GGCACATTCA
GGCCGACCAT GCATACCAGG CCCTGCCATC CTTTCAGATC CCCGTCTCGC CACACATCTA
CACCAGTATT AGCTGGGCCA CTGCCCCCCT CCACGGCCTC CTCCCTGTCT CCGGTCCGGA
GCCGGTCGCT AAGCTTCAGC GAGCCCCACC CAGCCACCCC CTGCCATGAA ATCTCACCTG
ATTGTCACTT CCTC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinZNF395zinc finger protein 395 [Homo sapiens]. 524e-148O
Contig/Assembly ProteinZNF704zinc finger protein 704 [Homo sapiens]. 1266e-29O
Contig/Assembly ProteinSLC2A4RGSLC2A4 regulator [Homo sapiens]. 78.22e-14O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinZfp395zinc finger protein 395 [Mus musculus]. 488e-138O
Contig/Assembly ProteinZfp704zinc finger protein 704 [Mus musculus]. 1241e-28


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC486094PREDICTED: similar to zinc finger protein 395 [Canis familiaris]. 565e-161O
Contig/Assembly ProteinLOC610881PREDICTED: similar to glucocorticoid induced gene 1 [Canis familiaris]. 1127e-25O
Contig/Assembly ProteinLOC485979PREDICTED: similar to SLC2A4 regulator [Canis familiaris]. 87.43e-17


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinZNF395zinc finger protein 395 [Bos taurus]. 586e-167O
Contig/Assembly ProteinZNF395PREDICTED: zinc finger protein 395-like [Bos taurus]. 557e-158O
Contig/Assembly ProteinZNF704zinc finger protein 704 [Bos taurus]. 1203e-27O
Contig/Assembly ProteinZNF704PREDICTED: zinc finger protein 704-like [Bos taurus]. 1203e-27O
Contig/Assembly ProteinLOC511523PREDICTED: zinc finger protein 704-like [Bos taurus]. 79.76e-15O
Contig/Assembly ProteinLOC511523PREDICTED: zinc finger protein 704-like [Bos taurus]. 79.76e-15O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinZNF395PREDICTED: zinc finger protein 395 isoform 1 [Sus scrofa]. 6390.0O
Contig/Assembly ProteinZNF395PREDICTED: zinc finger protein 395 isoform 2 [Sus scrofa]. 609e-174O
Contig/Assembly ProteinZNF704PREDICTED: zinc finger protein 704 [Sus scrofa]. 1233e-28O


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
KDN010042G05KDN01_0042_G05.bFS674147 AK393363
KDN010044B09KDN01_0044_B09.bFS674260 
KDN010082D08KDN01_0082_D08.bFS676953 
LVRM10039G07LVRM1_0039_G07.bCJ001784 
LVRM10050F05LVRM1_0050_F05.bBP452447 
LVRM10148E03LVRM1_0148_E03.bBP451570 
LVRM10168H09LVRM1_0168_H09.bCJ004534 
LVRM10179G11LVRM1_0179_G11.bCJ005400 
THY010009E10THY01_0009_E10.bBP165266 

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
81A020.400BNAAC/N
G300.600AGC/S
153C300.429BNCCT/P
T040.571CTT/L
498A300.600BNGAA/E
G020.400GGA/G


Alignment:      TOP

20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
KDN01_0044_B09.b : acatannnnttncctgcgttggctc
KDN01_0082_D08.b : tttttcctgaggttgctac
KDN01_0042_G05.b : ttttttnttcctgcgttggctat
LVRM1_0148_E03.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0050_F05.b : tagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0168_H09.b :
LVRM1_0039_G07.b : gagttgtcxxx
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : .........CTACAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGAAGAAAGCATT
---------+---------+---------+---------+---------+---------+ 51
KDN01_0044_B09.b : ggactttcaCTAAAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGCATAAAGCATT
KDN01_0082_D08.b : tggctttcactaCAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGAAGAAAGCATT
KDN01_0042_G05.b : ggactttcactaCAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGAAGAAAGCATT
LVRM1_0148_E03.b : ctttacaactacaAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGAAGAAAGCATT
LVRM1_0050_F05.b : xtttacaactacaAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGAAGAAAGCATT
LVRM1_0168_H09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0039_G07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxttgagcgccc
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : AAAGCAAAGGCAAATGGAAAGGAAAGGCAACAGCATGGCCAGCGTGCTGTCCCGGCGCCT
---------+---------+---------+---------+---------+---------+ 111
KDN01_0044_B09.b : AAAGCAAAGGCAAATGGAAAGGAAAGGCAGCAGCATGGCCAGCGTGCTGTCCCGGCGCCT
KDN01_0082_D08.b : AAAGCAAAGGCAAATGGAAAGGAAAGGCAGCAGCATGGCCAGCGTGCTGTCCCGGCGCCT
KDN01_0042_G05.b : AAAGCAAAGGCAAATGGAAAGGAAAGGCAGCAGCATGGCCAGCGTGCTGTCCCGGCGCCT
LVRM1_0148_E03.b : AAAGCAAAGGCAAATGGAAAGGAAAGGCAACAGCATGGCCAGCGTGCTGTCCCGGCGCCT
LVRM1_0050_F05.b : AAAGCAAAGGCAAATGGAAAGGAAAGGCAACAGCATGGCCAGCGTGCTGTCCCGGCGCCT
LVRM1_0168_H09.b : xxxgtttactagcgggcgggGGAAAGGCAACAGCATGGCCAGCGTGCTGTCCCGGCGCCT
LVRM1_0039_G07.b : actgtttactagcgggcgggGGAAAGGCAACAGCATGGCCAGCGTGCTGTCCCGGCGCCT
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACTTGGGGCTGTCCCACCCTT
---------+---------+---------+---------+---------+---------+ 171
KDN01_0044_B09.b : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACCTGGGGCTGTCCCACCCTT
KDN01_0082_D08.b : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACCTGGGGCTGTCCCACCCTT
KDN01_0042_G05.b : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACCTGGGGCTGTCCCACCCTT
LVRM1_0148_E03.b : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACTTGGGGCTGTCCCACCCTT
LVRM1_0050_F05.b : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACTTGGGGCTGTCCCACCCTT
LVRM1_0168_H09.b : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACTTGGGGCTGTCCCACCCTT
LVRM1_0039_G07.b : TGGCAAGCGGTCCCTCTTGGGAGCCCGGGTGTTGGGGCCACTTGGGGCTGTCCCACCCTT
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
---------+---------+---------+---------+---------+---------+ 231
KDN01_0044_B09.b : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
KDN01_0082_D08.b : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
KDN01_0042_G05.b : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
LVRM1_0148_E03.b : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
LVRM1_0050_F05.b : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
LVRM1_0168_H09.b : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
LVRM1_0039_G07.b : GGAGCCGCAGGCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGA
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
---------+---------+---------+---------+---------+---------+ 291
KDN01_0044_B09.b : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
KDN01_0082_D08.b : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
KDN01_0042_G05.b : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
LVRM1_0148_E03.b : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
LVRM1_0050_F05.b : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
LVRM1_0168_H09.b : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
LVRM1_0039_G07.b : CACGTCCTGCCAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCA
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCC
---------+---------+---------+---------+---------+---------+ 351
KDN01_0044_B09.b : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCC
KDN01_0082_D08.b : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCC
KDN01_0042_G05.b : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCC
LVRM1_0148_E03.b : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCC
LVRM1_0050_F05.b : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCC
LVRM1_0168_H09.b : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGCTTGTGTGTGGTATGGGGGTCAAGAATGCCC
LVRM1_0039_G07.b : GCCAGTGGCCTTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCT
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
---------+---------+---------+---------+---------+---------+ 411
KDN01_0044_B09.b : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
KDN01_0082_D08.b : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
KDN01_0042_G05.b : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
LVRM1_0148_E03.b : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
LVRM1_0050_F05.b : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
LVRM1_0168_H09.b : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
LVRM1_0039_G07.b : AGGGATGGTGGAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCA
LVRM1_0179_G11.b :
THY01_0009_E10.b :
20110601C-008453 : GAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCAT
---------+---------+---------+---------+---------+---------+ 471
KDN01_0044_B09.b : GAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCAT
KDN01_0082_D08.b : GAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCAT
KDN01_0042_G05.b : GAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCAT
LVRM1_0148_E03.b : GAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGATCTGCAGGGCCCCAT
LVRM1_0050_F05.b : GAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCAT
LVRM1_0168_H09.b : NAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGANCTGCAGGGCCCCAT
LVRM1_0039_G07.b : GAAGTTACAAATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCAT
LVRM1_0179_G11.b : ttgtcxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0009_E10.b :
20110601C-008453 : CCCCCAGGCGCCACCTCCAGAGCCTGAAACCCAGGCACCAGCCTACCGGCCTGTCTCCAG
---------+---------+---------+---------+---------+---------+ 531
KDN01_0044_B09.b : CCCCCAGGCGCCACCTCCAGAGCCTGAAACCCAGGCACCAGCCTACCGGCCTGTCTCCAG
KDN01_0082_D08.b : CCCCCAGGCGCCACCTCCAGAGCCTGAAACCCAGGCACCAGCCTACCGGCCTGTCTCCAG
KDN01_0042_G05.b : CCCCCAGGCGCCACCTCCAGAGCCTGAAACCCAGGCACCAGCCTACCGGCCTGTCTCCAG
LVRM1_0148_E03.b : CCCCCAGGCGCCACCTCCAGAGCCTGGAACCCAAGCACCAGCCTACCGGCCTGTCTCCAG
LVRM1_0050_F05.b : CCCCCAGGCGCCACCTCCAGAGCCTGGAACCCAGGCACCAGCCTACCGGCCTGTCTCCAG
LVRM1_0168_H09.b : CCCCCAGGCGCCACCTCCAGAGCCTGAAACCCAGGCACCAACCTACCGGCCTGTCTCCAG
LVRM1_0039_G07.b : CCCCCAGGCGCCACCTCCAGAGCCTGGAACCCAGGCACCAGCCTACCGGCCTGTCTCCAG
LVRM1_0179_G11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCCAGGCACCAGCCTACCGGCCTGTCTCCAG
THY01_0009_E10.b :
20110601C-008453 : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGAAATGGACGAGATGATGGCGGC
---------+---------+---------+---------+---------+---------+ 591
KDN01_0044_B09.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGAAATGGACGAGATGATGGCGGC
KDN01_0082_D08.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGAAATGGACGAGATGATGGCGGC
KDN01_0042_G05.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGAAATGGACGAGATGATGGCGGC
LVRM1_0148_E03.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGGAATGGACGAGATGATGGCGGC
LVRM1_0050_F05.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGAAATGGACGAGATGATGGCGGC
LVRM1_0168_H09.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCaatggaaatgaacaagaaaaaaacgaa
LVRM1_0039_G07.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGAAATGGACGAGATGATGGCGGC
LVRM1_0179_G11.b : GAACATTGACGTCCCAAAGAGGAAGTCGGATGCCGTGGAAATGGACGAGATGATGGCGGC
THY01_0009_E10.b :
20110601C-008453 : CATGGTGCTGACCTCCCTGTCCTGCAGCCCCGTTGTGCAGAGTCCTCCCGGGGTCGAGGC
---------+---------+---------+---------+---------+---------+ 651
KDN01_0044_B09.b : CATGGTGCTGACCTCCCTGTCCTGCAGCCCCGTTGTGCAGAGTCCTCCCGGGGTCGAGGC
KDN01_0082_D08.b : CATGGTGCTGACCTCCCTGTCCTGCAGCCCCGTTGTGCAGAGTCCTCCCGGGGTCGAGGC
KDN01_0042_G05.b : CATGGTGCTGACCTCCCTGTCCTGCAGCCCCGTTGTGCAGAGTCCTCCCGGGGTCGAGGC
LVRM1_0148_E03.b : CATGGTGCTGACCTCCCTGTTCTGCAGCCCCGTTGTGCATAGTCCTCCCGGGGTCGTAGC
LVRM1_0050_F05.b : CATGGTGCTGACCTCCCTGTCCTGCAGCCCCGTTGTGCAGAGTCCTCCCGGGGTCGAGGC
LVRM1_0168_H09.b : accgaggcataacctccaggcctgcacccacgctttcgaagagtcctccccaggtataaa
LVRM1_0039_G07.b : CATGGTGCTGACCTCCCTGTCCTGCAGCCCCGTTGTGCAGAGTCCTCCCCGGGTCGAGGC
LVRM1_0179_G11.b : CATGGTGCTGACCTCCCTGTCCTGCAGCCCCGTTGTGCAGAGTCCTCCCGGGGTCGAGGC
THY01_0009_E10.b :
20110601C-008453 : CAACTTCTCTGCTTCCCGCGCCGCCTGTGACCCGTGGAAGGAGAGTGGCGACGTGTCAGA
---------+---------+---------+---------+---------+---------+ 711
KDN01_0044_B09.b : CAACTTCTCTGCTTCCCGCGCCGCCTGTGACCCGTGGAAGGAGAGTGGCGACGTGTCAGA
KDN01_0082_D08.b : CAACTTCTCTGCTTCCCGCGCCGCCTGTGACCCGTGGAAGGAGAGTGGCGACGTGTCAGA
KDN01_0042_G05.b : CAACTTCTCTGCTTCCCGCGCCGCCTGTGACCCGTGGAAGGAGAGTGGCGACGTGTCAGA
LVRM1_0148_E03.b : CAAATTCTCTGCATCCCGCGgcgcactgtgacccgtggaaagaagagtggcgacgtgtca
LVRM1_0050_F05.b : CAACTTCTCTGCTTCCCGCGCCGCCTGTGAACCGTGTGAAGAGAGTGGCGACGTGTCATA
LVRM1_0168_H09.b : gccgaaagctattataggaagcaccaacgaagtacattgtataggtgagtccaaaagggc
LVRM1_0039_G07.b : CAACTTCTCTGCTTCCCGCGCCGCCTGTGACCCGTGGAAGGAGAGTGGCGACGTGTCAGA
LVRM1_0179_G11.b : CAACTTCTCTGCTTCCCGCGCCGCCTGTGACCCGTGGAAGGAGAGTGGCGACGTGTCAGA
THY01_0009_E10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008453 : CAGCGGCAGTAGCACCACCAGCGGGCACTGGAGCGGGAGCAGCGGTGTCTCCACCCCCTC
---------+---------+---------+---------+---------+---------+ 771
KDN01_0044_B09.b : CAGCGGCAGTAGCACCACCAGCGGGCACTGGAGCGGGAGCAGCGGTGTCTCCACCCCCTC
KDN01_0082_D08.b : CAGCGGCAGTAGCACCACCAGCGGGCACTGGAGCGGGAGCAGCGGTGTCTCCACCCCCTC
KDN01_0042_G05.b : CAGCGGCAGTAGCACCACCAGCGGGCACTGGAGCGGGAGCAGCGGTGTCTCCACCCCCTC
LVRM1_0148_E03.b : aactgaggcaagtatccccaccgctggcccagggaacgggaacagcgctgtctcctcccc
LVRM1_0050_F05.b : CANCGGCAATAGCACCACCAGCGGCCACTGGATCGGGAGCAccggttctt
LVRM1_0168_H09.b : atatagacgtcacgtacaaccacacaaaatagcaggccgaacaaaaaggagtacgcccat
LVRM1_0039_G07.b : CAGCGGCAGTAGCACCCCCACC*GGCACTGGAGCGGGAGCAGCGGTGTCTCCACtcctcc
LVRM1_0179_G11.b : CAGCGGCAGTAGCACCACCAGCGGGCACTGGAGCGGGAGCAGCGGTGTCTCCACCCCCTC
THY01_0009_E10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGGAGCAGCGGTGTCTCCACCCCCTC
20110601C-008453 : CCCTCCCCACCCCCAGGCCAGCCCCAAGTATTTGGGGGATGCCTTTGGTTCTCCGCAAAC
---------+---------+---------+---------+---------+---------+ 831
KDN01_0044_B09.b : CCCTCCCCACCCCCAGGCCAGCCCCAAGTATTTGGGGGATGCCTTTGGTTCTCCGCAAAC
KDN01_0082_D08.b : CCCTCCCCACCCCCAGGCCAGCCCCAAGTATTTGGGGGATGCCTTTGGTTCTCCGCAAAC
KDN01_0042_G05.b : CCCTCCCCACCCCCAGGCCAGCCCCAAGTATTTGGGGGATGCCTTTGGTTCTCCCGCAAC
LVRM1_0148_E03.b : cc
LVRM1_0050_F05.b :
LVRM1_0168_H09.b : ccttaaaacacgtttggatatatgaacaggatgaaa
LVRM1_0039_G07.b : cctcgccaccc
LVRM1_0179_G11.b : CCCTCCCCACCCCCAGGCCAGCCCCAAGTATTTGGGGGATGCCTTTGGTTCTCCGCAAAC
THY01_0009_E10.b : CCCTCCCTACCCCCAGGCCAGCCCCAAGTATTTGGGGGATGCCTTTGGTTCTCCGCAAAC
20110601C-008453 : TGATCATGGTTTTGAGACTGATCCAGATGCTTTCCTGTTGGATGAACCAGCTCCCCGCAA
---------+---------+---------+---------+---------+---------+ 891
KDN01_0044_B09.b : TGATCATGGTTTTGAGACTGATCCAGATGCTTTCCTGTTGGATGAACCAGCTCCCCGCAG
KDN01_0082_D08.b : TGATCATGGTTTTGAGACTGATCCAGATGCTTTCCTGTTGGATGAACCAGCTCCCCGCAA
KDN01_0042_G05.b : TGATCATGGTTTTGAGACTGATCCAGATGCTTTCCCTGTGGATGAACCAGCTCCCCGCAA
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b : TGATCATGGTTTTGAGACTGATCCAGATGCTTTCCTGTTGGATGAACCAGCTCCCCGCAA
THY01_0009_E10.b : TGATCACGGTTTTGAGACTGATCCAGATGCTTTCCTGTTGGATGAACCAGCTCCCCGCAA
20110601C-008453 : GAGAAAGAACTCGGTGAAGGTGATGTACAAGTGCCTGTGGCCCAACTGCGGCAAAGTCCT
---------+---------+---------+---------+---------+---------+ 951
KDN01_0044_B09.b : AGA*AAGAACTCGGTGAAGGTGATGTACAAGTGCCTGTGGCCCAACTGCGGNCAAGTCCT
KDN01_0082_D08.b : GAGAAAGAACTCGGTGAAAGTGATGTACAAGTGCCTGTGGCCCAACTGCGGCAAAGTCCT
KDN01_0042_G05.b : GAG*AAAGACTCGGTGAAAGTGATGTACAAGTGCCTGTGGCCCCACTGCGGCAAAGT*CT
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b : GAGAAAGAACTCGGTGAAGGTGATGTACAAGTGCCTGTGGCCCAACTGCGGCAAAGTCCT
THY01_0009_E10.b : GAGAAAGAACTCGGTGAAGGTGATGTACAAGTGCCTGTGGCCCAACTGCGGCAAAGTCCT
20110601C-008453 : GCGCTCCATCGTGGGCATCAAGCGACACGTCAAAGCCCTTCACCTGGGGGATACCGTGGA
---------+---------+---------+---------+---------+---------+ 1011
KDN01_0044_B09.b : GCGCTCCATCGTGGGCATCAAGCGACACGTCAAAGCCCTTCACCTGNGGGATACgtgaac
KDN01_0082_D08.b : GCGCTCCATCGTGGGCATCAAGCGACACGTCAAAGCCTTTCACtgggggataccgtggac
KDN01_0042_G05.b : GCGCTCCATCGTGGGCATCAAGCGACACGTCAAAGCCTTTCACtgggggatacgtggact
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b : GCGCTCCATCGTGGGCATCAAGCGACACGTCAAAGCCCTTCACCTGGGGGATACCGTGGA
THY01_0009_E10.b : GCGCTCCATCGTGGGCATCAAGCGACACGTCAAAGCCCTTCACCTGGGGGATACCGTGGA
20110601C-008453 : CTCCGACCAGTTCAAGCGGGAGGAGGATTTCTACTACACGGAGGTGCAGATGAAGGAGGA
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0044_B09.b : tcccgacagtcagcggnaggaggattctactacaacgagtgcaaatgaangagagctgct
KDN01_0082_D08.b : tccgaccagttaagcgggaaggagatttctactacacggaagtgcaaatgaagagggaac
KDN01_0042_G05.b : ccgacagttcaacggaaggagatttctactacacgagtgcaaatgaaggagagctgctgc
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b : CTCCGACCAGTTCAAGCGGGAGGAGGATTTCTACTACACGGAGGTGCAGATGAAGGACGA
THY01_0009_E10.b : CTCCGACCAGTTCAAGCGGGAGGAGGATTTCTACTACACGGAGGTGCAGATGAAGGAGGA
20110601C-008453 : AGCTGCTGCCTTGGGCGCCCCCGCAGCTGACCTGGCTCCCACCCCCGGCGTGACCAGCCC
---------+---------+---------+---------+---------+---------+ 1131
KDN01_0044_B09.b : gcctttggcgcccccagctgaactgnctccaccccngggtgacagcccaccctcgcatct
KDN01_0082_D08.b : tgctgccttgggcgccccgcagctgaactggctccaaccccggggtgacaggccacccct
KDN01_0042_G05.b : cttggcgccccgcactgactggttccaccccgcntgaacagccaccctcgcattttccaa
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b : AGCTGCTGCCTTGGGCGCCCCCGCAGCTGACCTGGCTCCCAACCCCGGCGTGACCAGCCC
THY01_0009_E10.b : AGCTGCTGCCTTGGGCGCCCCCGCAGCTGACCTGGCTCCCACCCCCGGCGTGACCAGCCC
20110601C-008453 : ACCCCTCGCCATTCTCCCACCGCCTCCTCCCAAAGCCCAGCCCTCAGGCCCAGATCACCC
---------+---------+---------+---------+---------+---------+ 1191
KDN01_0044_B09.b : ccacggctcttccaagccagcctcaggccaaatacctggctgaatctactgcctctgggg
KDN01_0082_D08.b : cgcattctcaacgggctcttccaaggccaccttcagccaaataccctggctggagtccta
KDN01_0042_G05.b : cgctctccaagccagccttagcccaatcactggctgaatctactggcctggggttcaaga
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b : ACCCCTCGCCATTCTCCCACCGCCTCCTCCCAAAGCCCAGCCTTCAGGCCCTAATCACCC
THY01_0009_E10.b : ACCCCTCGCCATTCTCCCACCGCCTCCTCCCAAAGCCCAGCCCTCAGGCCCAGATCACCC
20110601C-008453 : TGGCCTGGAGTCCTACCTGCCCTCTGGTGCTCTCAGCAAGTCAGCTCCTGGCTCCTTCTG
---------+---------+---------+---------+---------+---------+ 1251
KDN01_0044_B09.b : tccagaagtactctgggtcctttgaaattaggcaaatggatacaggctgcatctttaaac
KDN01_0082_D08.b : ctgcctctggggtccaaaaagtactcctggtcttctgaaattaaggcaacaggaacaggg
KDN01_0042_G05.b : taattccggccctttggatttagccaatgaaacagcctgcccctaaaaccgttcccaatt
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b : TGGCCTGGAGTCCTACCTGgccctccggtgctctcaaccaagatcact
THY01_0009_E10.b : TGGCCTGGAGTCCTACCTGCCCTCTGGTGCTCTCAGCAAGTCAGCTCCTGGCTCCTTCTG
20110601C-008453 : GCACATTCAGGCCGACCATGCATACCAGGCCCTGCCATCCTTTCAGATCCCCGTCTCGCC
---------+---------+---------+---------+---------+---------+ 1311
KDN01_0044_B09.b : cgtcgccacattaccaaataatggcagccctccggctctccgtttggggaagggttattt
KDN01_0082_D08.b : ctggcttctttaatcccttccccaatttacaaaattaggggactgcccctcaggctctct
KDN01_0042_G05.b : aacaatattgggctggcccccggctctcgtttgggaagggttatttgagacaaaaccccc
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : GCACATTCAGGCCGACCATGCATACCAGGCCCTGCCATCCTTTCAGATCCCCGTCTCGCC
20110601C-008453 : ACACATCTACACCAGTATTAGCTGGGCCACTGCCCCCCTCCACGGCCTCCTCCCTGTCTC
---------+---------+---------+---------+---------+---------+ 1371
KDN01_0044_B09.b : agacccaaacccgcggaatctttttttctctcgcaaaccaaacggggaaancatattaac
KDN01_0082_D08.b : tgttcgggggacgtgtaattttgacccaccccccccttaatatcctttttcttcccgcgc
KDN01_0042_G05.b : gaaaccatttttcccgccaacccaaacggggaaaatggatctctccgcggcccccgaggc
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : ACACATCTACACCAGTATTAGCTGGGCCACTGCCCCCCTCCACGGCCTCCTCCCTGTCTC
20110601C-008453 : CGGTCCGGAGCCGGTCGCTAAGCTTCAGCGAGCCCCACCCAGCCACCCCCTGCCATGAAA
---------+---------+---------+---------+---------+---------+ 1431
KDN01_0044_B09.b : acaggcctctcaaggcctcttccccccggaaggccccacagagtattgattccttt
KDN01_0082_D08.b : caaccacaaccggggagaatacggtatctcacccaggtcccccagagagctctttctccc
KDN01_0042_G05.b : t
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : CGGTCCGGAGCCGGTCGCTAAGCTTCAGCGAGCCCCACCCAGCCACCCCCTGCCATGAAA
20110601C-008453 : TCTCACCTGATTGTCACTTCCTC.....................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b : cacgagagagacacctaatcagt
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : TCTCACCTGATTGTCACTTCCTCcaccccgggcccacagcagcgcccggaaagcccgtgc
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : ggaggcccataaatgccccagggataccgcatccagcaccgggactcgtggtgccacagc
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : ctgccgctggaataacgcgtgccatcgcttcctggactgaccgcccaccccctgcccaaa
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : ggcctgaggaacggagcaggcctgaccccacccctccccaaaaaatttcaaccttaagat
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : tggccatgggcgagtttggtttcttttgcctactgtttacatttcttaaaaccctttttc
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : cccctcccctccgcgcgaccgtttttttttttttaaaaaaaaaaaaaaaacacaaaacat
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : ttcttttttttttcctctctacatcttttacaaaatccccccaatccccgcccccacggg
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : gctatttttcctctactgaaaacccaaaaaaaaccaaactacaattttttttttttaaaa
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : tcctcctccccccccccccccccccaatcaccactcctcccccctcccctccctctctat
20110601C-008453 : ............................................................
---------+---------+---------+---------+---------+---------+ 1454
KDN01_0044_B09.b :
KDN01_0082_D08.b :
KDN01_0042_G05.b :
LVRM1_0148_E03.b :
LVRM1_0050_F05.b :
LVRM1_0168_H09.b :
LVRM1_0039_G07.b :
LVRM1_0179_G11.b :
THY01_0009_E10.b : ggagcgc