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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008763

Length: 1,060

Sequence [FASTA format sequence]
CGTTCGGGGA AGGTGGGGGC AATCATGGTG CCGCTGGGGA GGGGAGAAGC TGCTGCCGCC
GCCGCTGTTG CCGGGAGCCG CGGAGACAGG TCACTACCTT TCCATTTCTC ACAATTGGGC
TGAGCACAAT TGAACCATGG GGGAACACAG TCCAGACAAC AGCATCAGCT ATTTTGAGGC
AGAGGAAGAT GAGCTGACCC CCGATGACAA GATGCTCAGG TTTGTGGATA AGAACGGACT
GGTGCCTTCC TCATCTGGAA CTGTTTATGA TAGGACAACT GTTCTCATTG AGCAGGACCC
TGGCACTTTG GAGGATGACG ATGATGATGG ACAGTGTGGA GAACACTTGC CTTTTCTAGT
AGGGGGTGAA GAGGGCTTTC ACCTAATAGA TCATGAAGCA ATGTCCCAGG GTTACGTGCA
ACACATCATT TCACCAGATC AGATTCATTT AACAATAAAC CCTGGTTCCA CGCCCATGCC
AAGAAATATC GAAGGTGCAA CCCTCACTCT GCAGTCGGAA TGTCCAGAAA CGAAACGCAA
AGAAGTAAAG CGGTACCAGT GCACCTTTGA GGGCTGTCCC CGCACCTACA GCACAGCAGG
CAACCTGCGC ACCCACCAGA AGACTCACCG GGGAGAGTAC ACCTTTGTCT GTAATCAGGA
GGGCTGCGGC AAGGCCTTCC TCACCTCCTA CAGCCTCAGG ATCCACGTGC GAGTGCACAC
GAAGGAGAAG CCATTTGAGT GTGACGTGCA GGGCTGTGAG AAGGCGTTCA ACACGCTGTA
CAGGCTGAAA GCACACCAGA GGCTTCACAC AGGGAAGACG TTTAACTGTG AATCTGAAGG
CTGCAGCAAG TACTTCACGA CACTCAGTGA TCTGAGGAAG CACATTCGAA CCCATACAGG
AGAAAAGCCA TTTCGGTGTG ATCACGATGG CTGTGGAAAA GCATTTGCAG CAAGCCACCA
CCTGAAAACT CATGTCCGTA CGCATACTGG TGAAAGACCT TTTTTCTGCC CCAGTAATGG
CTGTGAGAAA ACATCAGCAC CCAGTACAGT CTCAAAAGTC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMTF1metal regulatory transcription factor 1 [Homo sapiens]. 624e-179O
Contig/Assembly ProteinZNF143zinc finger protein 143 [Homo sapiens]. 1811e-45
Contig/Assembly ProteinZNF76zinc finger protein 76 [Homo sapiens]. 1702e-42O
Contig/Assembly ProteinZNF700zinc finger protein 700 [Homo sapiens]. 1493e-36
Contig/Assembly ProteinZNF410zinc finger protein 410 isoform d [Homo sapiens]. 1496e-36O
Contig/Assembly ProteinZNF410zinc finger protein 410 isoform c [Homo sapiens]. 1496e-36
Contig/Assembly ProteinZNF410zinc finger protein 410 isoform a [Homo sapiens]. 1496e-36
Contig/Assembly ProteinZNF782zinc finger protein 782 [Homo sapiens]. 1494e-36
Contig/Assembly ProteinZNF410zinc finger protein 410 isoform b [Homo sapiens]. 1496e-36
Contig/Assembly ProteinZNF180zinc finger protein 180 [Homo sapiens]. 1472e-35


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMtf1metal regulatory transcription factor 1 [Mus musculus]. 592e-169O
Contig/Assembly ProteinZfp143zinc finger protein 143 [Mus musculus]. 1823e-46
Contig/Assembly ProteinZfp523zinc finger protein 76 [Mus musculus]. 1702e-42O
Contig/Assembly ProteinLOC100503173PREDICTED: zinc finger protein 14-like [Mus musculus]. 1571e-38O
Contig/Assembly ProteinLOC100503173PREDICTED: zinc finger protein 135-like [Mus musculus]. 1571e-38O
Contig/Assembly ProteinGm14430KRAB box and zinc finger, C2H2 type domain containing [Mus musculus]. 1523e-37
Contig/Assembly ProteinGm14434predicted gene 14434 [Mus musculus]. 1523e-37
Contig/Assembly ProteinGm14308hypothetical protein LOC100043381 [Mus musculus]. 1523e-37
Contig/Assembly Protein0610010B08RikKRAB box and zinc finger, C2H2 type domain containing [Mus musculus]. 1523e-37
Contig/Assembly ProteinGm2007PREDICTED: zinc finger protein 14-like [Mus musculus]. 1523e-37O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC608127PREDICTED: similar to Metal-regulatory transcription factor 1 (Transcription factor MTF-1) (MRE-binding transcription factor) [Canis familiaris]. 620e-178O
Contig/Assembly ProteinLOC485384PREDICTED: similar to Zinc finger protein 143 (SPH-binding factor) isoform 3 [Canis familiaris]. 1811e-45
Contig/Assembly ProteinLOC485384PREDICTED: similar to Zinc finger protein 143 (SPH-binding factor) isoform 2 [Canis familiaris]. 1811e-45
Contig/Assembly ProteinLOC485384PREDICTED: similar to Zinc finger protein 143 (SPH-binding factor) isoform 1 [Canis familiaris]. 1811e-45
Contig/Assembly ProteinLOC481754PREDICTED: similar to Zinc finger protein 76 isoform 2 [Canis familiaris]. 1702e-42O
Contig/Assembly ProteinLOC481754PREDICTED: similar to Zinc finger protein 76 isoform 3 [Canis familiaris]. 1702e-42O
Contig/Assembly ProteinLOC489720PREDICTED: similar to zinc finger protein 23 isoform 3 [Canis familiaris]. 1464e-35
Contig/Assembly ProteinLOC490776PREDICTED: similar to clones 23667 and 23775 zinc finger protein isoform 4 [Canis familiaris]. 1456e-35
Contig/Assembly ProteinLOC490776PREDICTED: similar to clones 23667 and 23775 zinc finger protein isoform 1 [Canis familiaris]. 1456e-35
Contig/Assembly ProteinLOC490776PREDICTED: similar to clones 23667 and 23775 zinc finger protein isoform 3 [Canis familiaris]. 1456e-35


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMTF1metal regulatory transcription factor 1 [Bos taurus]. 623e-178O
Contig/Assembly ProteinZNF143zinc finger protein 143 [Bos taurus]. 1817e-46
Contig/Assembly ProteinZNF782PREDICTED: RB-associated KRAB repressor-like [Bos taurus]. 1493e-36
Contig/Assembly ProteinZNF180zinc finger protein 180 [Bos taurus]. 1493e-36
Contig/Assembly ProteinZNF782PREDICTED: RB-associated KRAB repressor-like, partial [Bos taurus]. 1493e-36
Contig/Assembly ProteinZNF107PREDICTED: zinc finger protein 91 [Bos taurus]. 1463e-35
Contig/Assembly ProteinZNF836PREDICTED: zinc finger protein 836 [Bos taurus]. 1432e-34
Contig/Assembly ProteinZNF410zinc finger protein 410 [Bos taurus]. 1433e-34
Contig/Assembly ProteinZNF23PREDICTED: hCG2010338-like [Bos taurus]. 1411e-33
Contig/Assembly ProteinZNF23PREDICTED: hCG2010338-like [Bos taurus]. 1411e-33


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMTF1metal regulatory transcription factor 1 [Sus scrofa]. 626e-180O
Contig/Assembly ProteinZNF76PREDICTED: zinc finger protein 76 [Sus scrofa]. 1701e-42O
Contig/Assembly ProteinZNF143PREDICTED: zinc finger protein 143 [Sus scrofa]. 1617e-40
Contig/Assembly ProteinLOC100525422PREDICTED: zinc finger protein 782-like [Sus scrofa]. 1471e-35
Contig/Assembly ProteinZNF180PREDICTED: zinc finger protein 180 [Sus scrofa]. 1477e-36
Contig/Assembly ProteinZNF410PREDICTED: zinc finger protein 410 isoform 2 [Sus scrofa]. 1454e-35
Contig/Assembly ProteinZNF410PREDICTED: zinc finger protein 410 isoform 1 [Sus scrofa]. 1454e-35
Contig/Assembly ProteinLOC100514167PREDICTED: zinc finger protein 23-like [Sus scrofa]. 1415e-34
Contig/Assembly ProteinZNF227PREDICTED: zinc finger protein 227 [Sus scrofa]. 1401e-33
Contig/Assembly ProteinZNF235PREDICTED: zinc finger protein 235 [Sus scrofa]. 1401e-33


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
BFLT10112G03BFLT1_0112_G03.bHX202752 
KDN010042F09KDN01_0042_F09.bFS674140 
KDN010056D07KDN01_0056_D07.bFS674893 
LVRM10072D04LVRM1_0072_D04.bBP450761 AK394172
LVRM10194H01LVRM1_0194_H01.bCJ006547 
OVR010096F06OVR01_0096_F06.bBW967847 AK347778
OVRM10038B05OVRM1_0038_B05.bBP455885 
OVRT10046C12OVRT1_0046_C12.bFS690142 
PST010036E05PST01_0036_E05.bFS699662 

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
158A600.667BNAAC/N
G030.333GAC/D
172C030.333BSTAC/Y
T600.667TAT/Y
325C030.333BSGAC/D
T600.667GAT/D


Alignment:      TOP

20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0096_F06.b : nggctagtgacttgacagtttgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0112_G03.b : nnnccgttttcccnnnnnccgttcgcgttacgaggxxxxxxxxxxxx
KDN01_0042_F09.b :
LVRM1_0072_D04.b : tagttgtcxxxxxxxxxxxxxxxx
LVRM1_0194_H01.b : xxxxxxxxxx
OVRM1_0038_B05.b : cagttgtcxxxxxxxxxxxxxxx
OVRT1_0046_C12.b : nnnnnnctcagcgnacgxxxxxxxxxxxxxxxxxx
PST01_0036_E05.b :
KDN01_0056_D07.b :
20110601C-008763 : .................CGTTCGGGGAAGGTGGGGGCAATCATGGTGCCGCTGGGGAGGG
---------+---------+---------+---------+---------+---------+ 43
OVR01_0096_F06.b : xxxxxxxxxxxxxxxxxCGTTCGGGGAAGGTGGGGGCAATCATGCTGCCGCTGGGGAGGG
BFLT1_0112_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtATCATGGTGCCGCTGGGGAGGG
KDN01_0042_F09.b : tttttaccgctgtggctctgggaggtgggggcATCATGGTGCCGCTGGGGAGGG
LVRM1_0072_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATGGTGCCGCTGGGGAGGG
LVRM1_0194_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATGGTGCCGCTGGGGAGGG
OVRM1_0038_B05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATGGTGCCGCTGGGGAGGG
OVRT1_0046_C12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATGGTGCCGCTGGGGAGGG
PST01_0036_E05.b : tttctgacgttggctctggaatcTGGTGCCGCTGGGGAGGG
KDN01_0056_D07.b : nnnttcgctgtggctactggatcTGGTGCCGCTGGGGAGGG
20110601C-008763 : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
---------+---------+---------+---------+---------+---------+ 103
OVR01_0096_F06.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
BFLT1_0112_G03.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
KDN01_0042_F09.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
LVRM1_0072_D04.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
LVRM1_0194_H01.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
OVRM1_0038_B05.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
OVRT1_0046_C12.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
PST01_0036_E05.b : GAGAAGCTGCTGCCGCCGCCGCTGTCGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
KDN01_0056_D07.b : GAGAAGCTGCTGCCGCCGCCGCTGTTGCCGGGAGCCGCGGAGACAGGTCACTACCTTTCC
20110601C-008763 : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACAACAGC
---------+---------+---------+---------+---------+---------+ 163
OVR01_0096_F06.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACAACAGC
BFLT1_0112_G03.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACAACAGC
KDN01_0042_F09.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACAACAGC
LVRM1_0072_D04.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACGACAGC
LVRM1_0194_H01.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACGACAGC
OVRM1_0038_B05.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACGACAGC
OVRT1_0046_C12.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACAACAGC
PST01_0036_E05.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACAACAGC
KDN01_0056_D07.b : ATTTCTCACAATTGGGCTGAGCACAATTGAACCATGGGGGAACACAGTCCAGACAACAGC
20110601C-008763 : ATCAGCTATTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
---------+---------+---------+---------+---------+---------+ 223
OVR01_0096_F06.b : ATCAGCTATTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
BFLT1_0112_G03.b : ATCAGCTATTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
KDN01_0042_F09.b : ATCAGCTATTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
LVRM1_0072_D04.b : ATCAGCTACTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
LVRM1_0194_H01.b : ATCAGCTACTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
OVRM1_0038_B05.b : ATCAGCTACTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
OVRT1_0046_C12.b : ATCAGCTATTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
PST01_0036_E05.b : ATCAGCTATTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
KDN01_0056_D07.b : ATCAGCTATTTTGAGGCAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTT
20110601C-008763 : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
---------+---------+---------+---------+---------+---------+ 283
OVR01_0096_F06.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGCT
BFLT1_0112_G03.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
KDN01_0042_F09.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
LVRM1_0072_D04.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
LVRM1_0194_H01.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
OVRM1_0038_B05.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
OVRT1_0046_C12.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
PST01_0036_E05.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
KDN01_0056_D07.b : GTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACAACTGTT
20110601C-008763 : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGATGATGGACAGTGTGGAGAA
---------+---------+---------+---------+---------+---------+ 343
OVR01_0096_F06.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGATGATGGACAGTGTGGAGAA
BFLT1_0112_G03.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGATGATGGACAGTGTGGAGAA
KDN01_0042_F09.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGATGATGGACAGTGTGGAGAA
LVRM1_0072_D04.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGACGATGGACAGTGTGGAGAA
LVRM1_0194_H01.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGACGATGGACAGTGTGGAGAA
OVRM1_0038_B05.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGACGATGGACAGTGTGGAGAA
OVRT1_0046_C12.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGATGATGGACAGTGTGGAGAA
PST01_0036_E05.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGATGATGGACAGTGTGGAGAA
KDN01_0056_D07.b : CTCATTGAGCAGGACCCTGGCACTTTGGAGGATGACGATGATGATGGACAGTGTGGAGAA
20110601C-008763 : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
---------+---------+---------+---------+---------+---------+ 403
OVR01_0096_F06.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
BFLT1_0112_G03.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
KDN01_0042_F09.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
LVRM1_0072_D04.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
LVRM1_0194_H01.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
OVRM1_0038_B05.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
OVRT1_0046_C12.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
PST01_0036_E05.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
KDN01_0056_D07.b : CACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCACCTAATAGATCATGAAGCAATG
20110601C-008763 : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
---------+---------+---------+---------+---------+---------+ 463
OVR01_0096_F06.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
BFLT1_0112_G03.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
KDN01_0042_F09.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
LVRM1_0072_D04.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
LVRM1_0194_H01.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCACTTAACAATAAACCCT
OVRM1_0038_B05.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
OVRT1_0046_C12.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
PST01_0036_E05.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
KDN01_0056_D07.b : TCCCAGGGTTACGTGCAACACATCATTTCACCAGATCAGATTCATTTAACAATAAACCCT
20110601C-008763 : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
---------+---------+---------+---------+---------+---------+ 523
OVR01_0096_F06.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
BFLT1_0112_G03.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
KDN01_0042_F09.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
LVRM1_0072_D04.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
LVRM1_0194_H01.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
OVRM1_0038_B05.b : GGTCCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
OVRT1_0046_C12.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
PST01_0036_E05.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
KDN01_0056_D07.b : GGTTCCACGCCCATGCCAAGAAATATCGAAGGTGCAACCCTCACTCTGCAGTCGGAATGT
20110601C-008763 : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
---------+---------+---------+---------+---------+---------+ 583
OVR01_0096_F06.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
BFLT1_0112_G03.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
KDN01_0042_F09.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
LVRM1_0072_D04.b : CCAGAAACCAAACGCAAACAAGTAAAGCGGTACCACTGCACCTTTGAGGGCTGTCCCCGC
LVRM1_0194_H01.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
OVRM1_0038_B05.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
OVRT1_0046_C12.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
PST01_0036_E05.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
KDN01_0056_D07.b : CCAGAAACGAAACGCAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGC
20110601C-008763 : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
---------+---------+---------+---------+---------+---------+ 642
OVR01_0096_F06.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
BFLT1_0112_G03.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
KDN01_0042_F09.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
LVRM1_0072_D04.b : ACCTACAGCTCAGCAGGGAAGCTGCGCACCCACCAGAAGAATCAGCGGGGGAGAGTACAC
LVRM1_0194_H01.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
OVRM1_0038_B05.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
OVRT1_0046_C12.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
PST01_0036_E05.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
KDN01_0056_D07.b : ACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACTCACCG*GGGAGAGTACAC
20110601C-008763 : C*TTTGTCTGTAATCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
---------+---------+---------+---------+---------+---------+ 701
OVR01_0096_F06.b : C*TTTGTCTGTAATCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
BFLT1_0112_G03.b : C*TTTGTCTGTAATCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
KDN01_0042_F09.b : C*TTTGTCTGTAGTCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
LVRM1_0072_D04.b : CGTTTGTCTGTAATCGAGAGGGCTGCGGCAAGGACTTCCTCACCTCCTACcgacacagga
LVRM1_0194_H01.b : C*TTTGTCTGTAATCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
OVRM1_0038_B05.b : C*TTTGTCTGCAATCAGGAGGGCTGCGGCCAGGCCTTCCTCACCTCCTACAGCCTCAAGA
OVRT1_0046_C12.b : C*TTTGTCTGTAATCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
PST01_0036_E05.b : C*TTTGTCTGTAATCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
KDN01_0056_D07.b : C*TTTGTCTGTAATCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGA
20110601C-008763 : TCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAGGGCTGTGAGA
---------+---------+---------+---------+---------+---------+ 761
OVR01_0096_F06.b : TCCACGTGCGAGTGCACACGAAGGAAGAGCCATTTGAGTGTGACGTGCAGGGCTGTGAGA
BFLT1_0112_G03.b : TCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAGGGCTGTGAGA
KDN01_0042_F09.b : TCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAGGGCTGTGAGA
LVRM1_0072_D04.b : tccgactgcggaatgcccactaacggagaagccttttggatgtgacctgcacgggtn
LVRM1_0194_H01.b : TCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAagg
OVRM1_0038_B05.b : TCCACGTGCGAGTGCACACGAAAGACAAGCCATTTGAGTGTGACCTGCAGGGCTGTGAGA
OVRT1_0046_C12.b : TCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCANGGCTGTGAGA
PST01_0036_E05.b : TCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAGGGCTGTGAGA
KDN01_0056_D07.b : TCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAGGGCTGTGAGA
20110601C-008763 : AGGCGTTCAACACGCTGTACAGGCTGAAAGCACACCAGAGGCTTCACACAGGGAAGACGT
---------+---------+---------+---------+---------+---------+ 821
OVR01_0096_F06.b : AAGCGTTCAACACGCTGTACAGGCTGAAAGCACACCAGAGGCTTCCCACAGGGAAGACGT
BFLT1_0112_G03.b : AGGCGTTCAACACGCTGTACAGGCTGAAAGCACACCAGAGGCTTCACACAGGGAAGAACT
KDN01_0042_F09.b : AGGCGTTCAACACGCTGTACAGGCTGAAAGCACACCAGAGGCTTCACACAGGGAAGACGT
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b : CAGCGTTCAACACGCcgtaccagcgaaagca
OVRT1_0046_C12.b : AGGCGTTTCACACGCTGTACAGGCTGAAAGCACACCAGAAGCTTCACACAGGGGAGACGT
PST01_0036_E05.b : AGGCGTTCAACACGCTGTACAGGCTGAAAGCACACCAGAGGCTTCACACAGGGAAGACGT
KDN01_0056_D07.b : AGGCGTTCAACACGCTGTACAGGCTGAAAGCACACCAGAGGCTTCACACAGGGAAGACGT
20110601C-008763 : TTAACTGTGAATCTGAAGGCTGCAGCAAGTACTTCACGACACTCAGTGATCTGAGGAAGC
---------+---------+---------+---------+---------+---------+ 881
OVR01_0096_F06.b : TTTACTGTGAATCTGAAGGCTGCACCAAGTACTTCACGAAACTCAGTGATCTGAGGAAAC
BFLT1_0112_G03.b : TTAACTGTGAATCTGAAGGGCTGCAGCAGTACCTCACGACACTCATTGATCTGAAGAAGC
KDN01_0042_F09.b : TTAACTGTGAATCTGAAGGCTGCNAGCAGTACTTCACGACACTCAGTGATCTGAGGAAGC
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b : TTTACTGTGAATCTGAAAGCTGCAGCAAGTACTTCACGACACTCAGTGATCTGAGGAAGC
PST01_0036_E05.b : TTAACTGTGAATCTGAAGGCTGCAGCAAGTACTTCACGACACTCAGTGATCTGAGGAAGC
KDN01_0056_D07.b : TTAACTGTGAATCTGAAGGCTGCAGCAAGTACTTCACGACACTCAGTGATCTGAGGAAGC
20110601C-008763 : ACATTCGAACCCATACAGGAGAAAAGCCATTTCGGTGTGATCACGATGGCTGTGGAAAAG
---------+---------+---------+---------+---------+---------+ 941
OVR01_0096_F06.b : CCATTCCAACCCTTACAGGAAAAAAccatttccggtgtgatcccaagggctgtggaaaac
BFLT1_0112_G03.b : ACATTCGAACCCATACAGGAGAAAAGCCATTTCCGTGTGATCACGATGGCTGTGGAAAAG
KDN01_0042_F09.b : ACATTCGAACCCATACAGGGAGAAAGCCATTTCGGTGTGATCACGATGGCTGTGGAAAAG
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b : ACATTCGA*CCCATACAGGAGAAAAG*CATTTCGGTGTGATCACGATGGCTGTGG*AAAG
PST01_0036_E05.b : ACATTCGAACCCATACAGGAGAAAAGC*ATTTCGGTGTGATCACGATGGCTGTGGAAAAG
KDN01_0056_D07.b : ACATTCGAACCCATACAGGAGAAAAGCCATTTCGGTGTGATCACGATGGCTGTGGNAAAG
20110601C-008763 : CATTTGCAGCAAGCCACCACCTGAAAACTCATGTCCGTACGCATACTGGTGAAAGACCTT
---------+---------+---------+---------+---------+---------+ 1001
OVR01_0096_F06.b : cttccccgcaagcccccccccggaaaaacttaggtcccgtaccccacctggtgaaaaaac
BFLT1_0112_G03.b : Ctttgcaccagcccacactgaaaacttctgtccgtaccatactggtgaaaaactttttct
KDN01_0042_F09.b : CATTTGCAGNCAGCCACCACCCTGAAACTCATGTCCGTACGCATACTGGTGAAAGACTTT
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b : CATTTGCAGCAGGCCAC*AACTGAAAACTCATGTCCGTACGCATACTGGTGGAAGACCTT
PST01_0036_E05.b : CATTTGCAGCAAGCCACCACCTGAAAACTCATGTCCGTACGCATACTGGTGAAAGACTTT
KDN01_0056_D07.b : CATTTGCAGNCAGCCACCACCCTGAAACTCATGTCCGTACGCATACTGGTGAAANGACTT
20110601C-008763 : TTTTCTGCCCCAGTAATGGCTGTGAGAAAACATCAGCACCCAGTACAGTCTCAAAAGTC.
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b : ctttttttctgccccaaaaagggctggggaaaaaaacttttcgcccacccgtaaagtccc
BFLT1_0112_G03.b : gcccagtaatggcggggaaaactttccgccccagtacgttcccaaagttcatggaaaggc
KDN01_0042_F09.b : TTTctgccccagtaatggctgtgagaaacattcagcacccagtacagtctcaaagtcaca
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b : TTTTCTGgcccagtaatggctgttagaaaactttcgcccccccgtacggtccaaaagtcc
PST01_0036_E05.b : TTTtctgccccagtatggctggtgagaaacttcagcacccagtacagtctcaaagtccca
KDN01_0056_D07.b : TTTTCTGCCCCAGTAATGGCTGTGAGAAAACATCAGCACCCAGTACAGTCTCAAAAGTCc
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b : taaaaattcccagg
BFLT1_0112_G03.b : ccgatacacagggactccataacgccctttctaatccaagggataaaaggaacaatcctc
KDN01_0042_F09.b : tgaaaggtcacgaatacaagggaccctcatacagcgcgcttctgaatcccatggatcaga
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b : atgaaaggtcccgaataacaagggaatccttacacccgcttcttaatcaaagggataaag
PST01_0036_E05.b : tgaaagggtccgataccaagggacatcatacagcccgcttctgaatcccatggatcagag
KDN01_0056_D07.b : atggaaggtcacgatacaanggacctcatacagcgcgctctgatcacatggatcagagga
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b : cctttgtcgaaaatttacccttctcttaaattctgaatttaaaaaatccctaagggggaa
KDN01_0042_F09.b : ggatacattcactcccttgtctgaggaatttaaccttcgtctccgattctgaatttcaga
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b : gaaaaacccccccctttttcgagaaattaaactctccgccaaaattctaaatttagaaaa
PST01_0036_E05.b : aaacaatcctcactttgtcggaggatttagcttctggctcaaatctgattccagaaaatc
KDN01_0056_D07.b : tcaaatcactcctttgtctgaagattnagccttctggctccgttctgatttcaagaattc
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b : attccccccttctcaaaatttttttgccctgttcaaaacaaaaataaggttttggaatct
KDN01_0042_F09.b : aattcggtacagtcagaatccggcacctttcccaaaatcctttcgaacctgttccaaacc
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b : tcctgcagggggaaatcccccccctttcaaaaacttttggaacggtttaaaaaaaaa
PST01_0036_E05.b : cgtacaggtcaaattcgcacctttccaaaatcctttggacctgttccaaagccaaaaccg
KDN01_0056_D07.b : agtaaagtagattccgcacccttaccaaaatcttttcgacctgttcnaagcngaaaacnn
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b : ccacaaccccctcttaaaattattgtgaaagaaattatagtgcccccccaaaattcattt
KDN01_0042_F09.b : gaaaaatcgggttcggaagatccacaaaaccgtcttgatgaagttatggggggcaaaanc
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b :
PST01_0036_E05.b : ggttcgggaatcccacaaacctgctgttgaagttaagggaggaagcctcggggggcgccc
KDN01_0056_D07.b : ggatcggaaatccacaaacctcctgatgtagttaggtgagcaaacntnggaggcccccct
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b : ttctttttagggagggtccaacacccctttaacaactattgtctcttctctagagaat
KDN01_0042_F09.b : tgggaggcgcctcccagaatttaatctatatcttcctgttgggagggttccgaaccccac
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b :
PST01_0036_E05.b : ccaaaattaacttttctccctgtggggggtctagaaccaccttgtgaccacagtgtctgg
KDN01_0056_D07.b : aattatactcttcttcctggagangggcctaaaacccctttgaacaaagttgtcttggtc
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b :
KDN01_0042_F09.b : ttttggacctaacgtgttcttgggtcctcaaaagtcacaat
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b :
PST01_0036_E05.b : gcccctaagaggccaagtgttacccttttcccacagggtcccacattgttataattctcc
KDN01_0056_D07.b : tcnaagggcaggttgtgccccttctacaaggtcccagtgtttatattctcccccccccaa
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b :
KDN01_0042_F09.b :
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b :
PST01_0036_E05.b : ccgccgtcttttttttttgttc
KDN01_0056_D07.b : aannnnngttggggcnaaannnaannnaaacacacacacacacatcgccgcacnnnnnnn
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b :
KDN01_0042_F09.b :
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b :
PST01_0036_E05.b :
KDN01_0056_D07.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
20110601C-008763 : ............................................................
---------+---------+---------+---------+---------+---------+ 1060
OVR01_0096_F06.b :
BFLT1_0112_G03.b :
KDN01_0042_F09.b :
LVRM1_0072_D04.b :
LVRM1_0194_H01.b :
OVRM1_0038_B05.b :
OVRT1_0046_C12.b :
PST01_0036_E05.b :
KDN01_0056_D07.b : nnn