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[Other Clones] [Human Genome] [RefSeq] [UniGene] [Assembly] 

Clone Name:  OVRM1_0110_G06

Library: OVRM1 (Ovary)
Individual: M1, Meishan (Chinese)

Nucleotide sequence:   (length: 1,494)  [FASTA format sequence]
GGTGTGGCCC ACTGACGATC GGTGGGAGTC GTGCGTGGGG TTGGGAGTTG ACTCCGGGTG
TACTTCTGTG TTTCTGCTCA TCCTTTCCGT AG
ATGTCTCA TATGGAGCTG GGGTTGGACT
CGGGTGACGA TGACTTGCTG GGCTTCCTGT TAGAGGAAAG CGGAGGTCTG GGGGCGGCGC
CGGACGAAGC CTTGGAGGCG CCCCTGGATT GGGAGCTACC ACTTTCCGAG GCATTGAGCG
ATTGGGACGT AGAGGATTTC CTGAGCTGCC TGTCGAGTCC CCCAGCATCG TTGACCGATT
TTAGCCACTC TGACCCCTAT CTTGTCCACC ATGATCACAC CTATTCCCTG TCACAGGAGT
ATGTCTCCAT AGATCTAGAT AATGAGGATT ATGAGAAGGA AGGGGCCCAA ATGACTTCAC
TGCGTGTGGA GGCGCCCGCA GAGCAGGAGA TTGGTGAGCT GATACTGACG GAGGAGGAGA
AGAGGCTTTT GGAGAAGGAG GGGCTTACTC TGCCCGGGAC ACTTCCTCTC ACTAAGATGG
AGGAACAAGT TCTGAGACGA GTGCGAAGGA AGATTCGAAA CAAAAAGTCT GCTCAAGAGA
GCCGCAGGAA GAAGAAGGTG TATGTGGGGA GTTTAGAGAG CAGGGTCCTG AAATACTCGG
CCCAGAATCT GGAGCTACAG AACAAAGTAC AGCTCCTGGA GGAGCAGAAT CTGTCCCTTT
TGGATCAGTT GAGGAGGCTG CAGTCCATGG TGATTCAGAC GGCAAACAAA GCCAGCAGCA
GCAGCACCTG CATCTTGGTC CTGCTCTTCT CCTTCTGTCT CCTCTTCGTA CCTGCCATGT
ACTCCTCGGA CACAAGGGGG AGCCCGCCAG CCGAGCATGG AGTGTTGTCC CGCCAGCTTC
GTGCCCTCCC CAGCGAGGAC GTTCCCCAGC GGGACCTGCC TGCACTGCAG TCAGAGGTAC
CACAGGACAG CTCAACCCAC GAGCTCCAGG CTCCTGGCAA CTCTTGCTGC CTGTTCCACC
TCATGGCTTG GGCTCCTGGG GCAGAATCGC CCATGAAGCT GCCACTGCCC GACCGCTTCT
CAAGGTCTTC TAGCCCAGGT CCCATCTTCC CCCTGCATGC AAATCTCACA AGAGAGGGAG
GATGGCTCCC TACCCACAGC CCCATATCTG TTACCTTGCA GGGCAGGTAC TCAGGCTAGA
TGTGAGAATG CAGGGGGCCT CAGCCAGAGC CTGGTGCCCC CAGTCTGTGT TCAAAGGAAA
AGGAATGGGA GAGGGTGAGC CTCAGGTCCT GTCCCCTGTC AGGAAGCCTG AGGGCACAAA
CACACCACAC TTACTGGCTC TCTGGGGTTT TATTTGCACC CATGTATGTC TGTTGTTCCA
TTAAGGGGCC TGGGAGAGTC CACTGACTTC CTTGAACATT TCATGCAATG AGGGGATGGG
GTGAAGAAAG AAATAAATAA GTGATTCTGA TGCTTGGGAA AAAAAAAAAA AAAA

Deduced amino acid sequence:  (length: 368) [FASTA format sequence]
MSHMELGLDS GDDDLLGFLL EESGGLGAAP DEALEAPLDW ELPLSEALSD WDVEDFLSCL
SSPPASLTDF SHSDPYLVHH DHTYSLSQEY VSIDLDNEDY EKEGAQMTSL RVEAPAEQEI
GELILTEEEK RLLEKEGLTL PGTLPLTKME EQVLRRVRRK IRNKKSAQES RRKKKVYVGS
LESRVLKYSA QNLELQNKVQ LLEEQNLSLL DQLRRLQSMV IQTANKASSS STCILVLLFS
FCLLFVPAMY SSDTRGSPPA EHGVLSRQLR ALPSEDVPQR DLPALQSEVP QDSSTHELQA
PGNSCCLFHL MAWAPGAESP MKLPLPDRFS RSSSPGPIFP LHANLTREGG WLPTHSPISV
TLQGRYSG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Other Clones Sharing Similar Sequences:      TOP

Change score limit to  


Alignment to Human Genome Sequences:      TOP

Change score limit to  


BLAST on RefSeq (Human):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCREB3cyclic AMP-responsive element-binding protein 3 [Homo sapiens]. 382e-106O
Contig/Assembly ProteinCREB3L4cyclic AMP-responsive element-binding protein 3-like protein 4 [Homo sapiens]. 98.22e-20
Contig/Assembly ProteinCREB3L3cyclic AMP-responsive element-binding protein 3-like protein 3 [Homo sapiens]. 86.75e-17
Contig/Assembly ProteinCREB3L2cyclic AMP-responsive element-binding protein 3-like protein 2 [Homo sapiens]. 71.22e-12
Contig/Assembly ProteinCREB3L1cyclic AMP-responsive element-binding protein 3-like protein 1 [Homo sapiens]. 67.83e-11


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCreb3cyclic AMP-responsive element-binding protein 3 [Mus musculus]. 2724e-73O
Contig/Assembly ProteinCreb3l4cyclic AMP-responsive element-binding protein 3-like protein 4 [Mus musculus]. 943e-19
Contig/Assembly ProteinCreb3l3cyclic AMP-responsive element-binding protein 3-like protein 3 [Mus musculus]. 84.72e-16
Contig/Assembly ProteinLOC638517PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 2-like [Mus musculus]. 71.22e-12
Contig/Assembly ProteinCreb3l2cyclic AMP-responsive element-binding protein 3-like protein 2 [Mus musculus]. 71.22e-12


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC611934PREDICTED: similar to cAMP responsive element binding protein 3 [Canis familiaris]. 396e-110O
Contig/Assembly ProteinLOC612303PREDICTED: similar to cAMP responsive element binding protein 3-like 4 [Canis familiaris]. 95.12e-19
Contig/Assembly ProteinLOC485046PREDICTED: similar to cAMP responsive element binding protein 3-like 3 [Canis familiaris]. 85.51e-16
Contig/Assembly ProteinLOC491369PREDICTED: similar to cAMP responsive element binding protein 3-like 2 [Canis familiaris]. 71.22e-12
Contig/Assembly ProteinLOC483636PREDICTED: similar to cAMP responsive element binding protein 3-like 1 [Canis familiaris]. 67.83e-11


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCREB3cyclic AMP-responsive element-binding protein 3 [Bos taurus]. 447e-125O
Contig/Assembly ProteinCREB3L4PREDICTED: cAMP responsive element binding protein 3-like 4-like [Bos taurus]. 98.69e-21
Contig/Assembly ProteinCREB3L3cyclic AMP-responsive element-binding protein 3-like protein 3 [Bos taurus]. 84.72e-16
Contig/Assembly ProteinCREB3L2cyclic AMP-responsive element-binding protein 3-like protein 2 [Bos taurus]. 71.22e-12


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCREB3cyclic AMP-responsive element-binding protein 3 [Sus scrofa]. 565e-161
Contig/Assembly ProteinLOC100627545PREDICTED: hypothetical protein LOC100627545 [Sus scrofa]. 1287e-30
Contig/Assembly ProteinCREB3L4cyclic AMP-responsive element-binding protein 3-like protein 4 [Sus scrofa]. 95.19e-20
Contig/Assembly ProteinLOC100522979PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 3-like isoform 2 [Sus scrofa]. 85.95e-17


Oligo-microarray probe:      TOP
Probe IDRel.Probe sequence
AGPOA4-131284.1TTTCATGCAATGAGGGGATGGGGTGAAGAAAGAAATAAATAAGTGATTCTGATGCTTGGG


Assembly member:      TOP
ReleaseContig/SingletClonesDirection
2003053120030531C-0035567fwd
2003082620030826C-0008728fwd
2004020420040204C-0008652fwd
2005032220050322C-0008245fwd
2006061120060611C-0008534fwd
2007080620070806C-0075774fwd
2008051520080515C-0017678fwd
2010100120101001C-00692811fwd
2011060120110601C-00769511fwd